prot_M-pyrifera_M_contig117085.3528.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig117085.3528.1
Unique Nameprot_M-pyrifera_M_contig117085.3528.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length49
Homology
BLAST of mRNA_M-pyrifera_M_contig117085.3528.1 vs. uniprot
Match: A0A1F6U0W3_9PROT (Uncharacterized protein n=1 Tax=Candidatus Muproteobacteria bacterium RIFCSPLOWO2_01_FULL_60_18 TaxID=1817768 RepID=A0A1F6U0W3_9PROT)

HSP 1 Score: 54.3 bits (129), Expect = 1.710e-8
Identity = 25/47 (53.19%), Postives = 34/47 (72.34%), Query Frame = 0
Query:    2 INNRGDIVGQGRINAESHAYLITTVPLPAAASLLFSGILGLSGFARN 48
            IN+ G I+G G IN ++HA+L+T VP+PAA  L  SG++GL GF R 
Sbjct:   22 INDSGQIIGSGIINGQTHAFLMTPVPIPAAFWLFGSGLVGLFGFMRR 68          
BLAST of mRNA_M-pyrifera_M_contig117085.3528.1 vs. uniprot
Match: A0A4R3Y378_9PROT (Putative secreted protein n=2 Tax=Sulfurirhabdus autotrophica TaxID=1706046 RepID=A0A4R3Y378_9PROT)

HSP 1 Score: 57.0 bits (136), Expect = 3.430e-8
Identity = 29/49 (59.18%), Postives = 36/49 (73.47%), Query Frame = 0
Query:    2 INNRGDIVGQGRINAESHAYLIT--TVPLPAAASLLFSGILGLSGFARN 48
            IN+ G IVG G IN +SHAYL+T   VP+PAAA L  SG+LG++GF R 
Sbjct:  318 INDLGQIVGMGTINGQSHAYLMTPTAVPVPAAAWLFGSGLLGMAGFVRK 366          
BLAST of mRNA_M-pyrifera_M_contig117085.3528.1 vs. uniprot
Match: A0A7C5SQG3_9GAMM (DUF3466 family protein n=1 Tax=Thiotrichales bacterium TaxID=2026796 RepID=A0A7C5SQG3_9GAMM)

HSP 1 Score: 52.8 bits (125), Expect = 4.310e-7
Identity = 25/48 (52.08%), Postives = 32/48 (66.67%), Query Frame = 0
Query:    2 INNRGDIVGQGRINAESHAYLITTVPLPAAASLLFSGILGLSGFARNR 49
            IN+ GDIVG G I   +  ++I+ VP+PAAA L  SG+ GL GF R R
Sbjct:  123 INDNGDIVGYGSIGGVTRGFVISAVPVPAAAWLFLSGLFGLLGFIRRR 170          
BLAST of mRNA_M-pyrifera_M_contig117085.3528.1 vs. uniprot
Match: A0A4R3Y4I4_9PROT (Putative secreted protein n=1 Tax=Sulfurirhabdus autotrophica TaxID=1706046 RepID=A0A4R3Y4I4_9PROT)

HSP 1 Score: 48.1 bits (113), Expect = 4.670e-5
Identity = 27/51 (52.94%), Postives = 35/51 (68.63%), Query Frame = 0
Query:    1 DINNRGDIVGQGRINAESHAYLIT--TVPLPAAASLLFSGILGLSGFARNR 49
            DIN+ G IVG G IN +  ++L+T  +VP+PAAA LL SG+LGL   A  R
Sbjct:  324 DINDLGQIVGIGTINGQYRSFLMTPTSVPVPAAAWLLGSGLLGLISVAHKR 374          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig117085.3528.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A1F6U0W3_9PROT1.710e-853.19Uncharacterized protein n=1 Tax=Candidatus Muprote... [more]
A0A4R3Y378_9PROT3.430e-859.18Putative secreted protein n=2 Tax=Sulfurirhabdus a... [more]
A0A7C5SQG3_9GAMM4.310e-752.08DUF3466 family protein n=1 Tax=Thiotrichales bacte... [more]
A0A4R3Y4I4_9PROT4.670e-552.94Putative secreted protein n=1 Tax=Sulfurirhabdus a... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022472VPLPA-CTERM protein sorting domainTIGRFAMTIGR03370TIGR03370coord: 26..47
e-value: 1.2E-6
score: 26.4
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..19
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 47..49
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..46
NoneNo IPR availableTMHMMTMhelixcoord: 20..42

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig117085contigM-pyrifera_M_contig117085:1..147 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig117085.3528.1mRNA_M-pyrifera_M_contig117085.3528.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig117085 1..147 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig117085.3528.1 ID=prot_M-pyrifera_M_contig117085.3528.1|Name=mRNA_M-pyrifera_M_contig117085.3528.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=49bp
DINNRGDIVGQGRINAESHAYLITTVPLPAAASLLFSGILGLSGFARNR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022472VPLPA-CTERM