prot_M-pyrifera_M_contig116889.3494.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig116889.3494.1
Unique Nameprot_M-pyrifera_M_contig116889.3494.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length59
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig116889.3494.1 vs. uniprot
Match: UPI00077A1A88 (pleckstrin homology domain-containing family H member 1-like n=1 Tax=Acropora digitifera TaxID=70779 RepID=UPI00077A1A88)

HSP 1 Score: 51.2 bits (121), Expect = 1.210e-6
Identity = 28/62 (45.16%), Postives = 37/62 (59.68%), Query Frame = 0 
Query:    1 KNWRRRWFVLLGTDLYYYHSEKATD--PLGLVPLGRDSVRVVENDAQDSI-LCTRKHCFLIT 59
            KNWR+RWFVL G +LYYY SE  T+  PLG +PL   + R+   D   +  + T K  F +T
Sbjct:   31 KNWRKRWFVLSGGNLYYYKSENETNRKPLGQIPLD-GTCRIARTDGALTFEVATPKRTFYLT 91
[Close]
BLAST of mRNA_M-pyrifera_M_contig116889.3494.1 vs. uniprot
Match: A0A060XW59_ONCMY (PH domain-containing protein n=1 Tax=Oncorhynchus mykiss TaxID=8022 RepID=A0A060XW59_ONCMY)

HSP 1 Score: 49.3 bits (116), Expect = 7.500e-6
Identity = 20/49 (40.82%), Postives = 30/49 (61.22%), Query Frame = 0 
Query:    1 KNWRRRWFVLLGTDLYYYHSEKATDPLGLVPLGRDSVRVVENDAQDSIL 49
            K W+RRWF+L  + LYY+      DP+G++PL   SVR +E+  +   L
Sbjct:    7 KTWKRRWFILTDSCLYYFEYTTDKDPIGIIPLENLSVREIEDSTKQYCL 55
[Close]
BLAST of mRNA_M-pyrifera_M_contig116889.3494.1 vs. uniprot
Match: UPI001CF2AA6C (pleckstrin homology domain-containing family H member 1-like isoform X1 n=4 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF2AA6C)

HSP 1 Score: 50.1 bits (118), Expect = 1.530e-5
Identity = 27/62 (43.55%), Postives = 37/62 (59.68%), Query Frame = 0 
Query:    1 KNWRRRWFVLLGTDLYYYHSEKATD--PLGLVPLGRDSVRVVENDAQDSI-LCTRKHCFLIT 59
            KNW++RWFVL G +LYYY SE  T+  PLG +PL   + R+   D   +  + T K  F +T
Sbjct:  639 KNWKKRWFVLSGGNLYYYKSENETNRKPLGQIPLD-GTCRIARTDGALTFEVATPKRTFYLT 699
[Close]
BLAST of mRNA_M-pyrifera_M_contig116889.3494.1 vs. uniprot
Match: UPI001F0758ED (cytohesin-2 isoform X1 n=3 Tax=Hypomesus transpacificus TaxID=137520 RepID=UPI001F0758ED)

HSP 1 Score: 49.3 bits (116), Expect = 2.790e-5
Identity = 19/49 (38.78%), Postives = 30/49 (61.22%), Query Frame = 0 
Query:    1 KNWRRRWFVLLGTDLYYYHSEKATDPLGLVPLGRDSVRVVENDAQDSIL 49
            K W+RRWF+L  + LYY+H     DP+G++PL    VR +++  +   L
Sbjct:  285 KTWKRRWFILTDSCLYYFHYTTDKDPIGIIPLENLCVREIQDSGKQYCL 333
[Close]
BLAST of mRNA_M-pyrifera_M_contig116889.3494.1 vs. uniprot
Match: UPI00159CB74C (cytohesin-3 isoform X1 n=3 Tax=Hippoglossus TaxID=8266 RepID=UPI00159CB74C)

HSP 1 Score: 48.5 bits (114), Expect = 5.240e-5
Identity = 19/38 (50.00%), Postives = 26/38 (68.42%), Query Frame = 0 
Query:    1 KNWRRRWFVLLGTDLYYYHSEKATDPLGLVPLGRDSVR 38
            K WRRRWF+L  + LYY+     TDP+G++PL   S+R
Sbjct:  312 KTWRRRWFILTDSCLYYFKYTTDTDPIGIIPLENLSIR 349
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig116889.3494.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
UPI00077A1A881.210e-645.16pleckstrin homology domain-containing family H mem... [more]
A0A060XW59_ONCMY7.500e-640.82PH domain-containing protein n=1 Tax=Oncorhynchus ... [more]
UPI001CF2AA6C1.530e-543.55pleckstrin homology domain-containing family H mem... [more]
UPI001F0758ED2.790e-538.78cytohesin-2 isoform X1 n=3 Tax=Hypomesus transpaci... [more]
UPI00159CB74C5.240e-550.00cytohesin-3 isoform X1 n=3 Tax=Hippoglossus TaxID=... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001849Pleckstrin homology domainPFAMPF00169PHcoord: 2..58
e-value: 2.9E-8
score: 34.2
IPR001849Pleckstrin homology domainPROSITEPS50003PH_DOMAINcoord: 1..59
score: 10.123
IPR011993PH-like domain superfamilyGENE3D2.30.29.30coord: 1..59
e-value: 1.0E-13
score: 53.0
NoneNo IPR availableSUPERFAMILY50729PH domain-likecoord: 1..59

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig116889contigM-pyrifera_M_contig116889:41..217 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig116889.3494.1mRNA_M-pyrifera_M_contig116889.3494.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig116889 41..217 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig116889.3494.1 ID=prot_M-pyrifera_M_contig116889.3494.1|Name=mRNA_M-pyrifera_M_contig116889.3494.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=59bp
KNWRRRWFVLLGTDLYYYHSEKATDPLGLVPLGRDSVRVVENDAQDSILC
TRKHCFLIT
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001849PH_domain
IPR011993PH-like_dom_sf