prot_M-pyrifera_M_contig116790.3477.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig116790.3477.1
Unique Nameprot_M-pyrifera_M_contig116790.3477.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length84
Homology
BLAST of mRNA_M-pyrifera_M_contig116790.3477.1 vs. uniprot
Match: A0A5A8CIF7_CAFRO (Uncharacterized protein n=5 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CIF7_CAFRO)

HSP 1 Score: 89.7 bits (221), Expect = 3.190e-19
Identity = 44/83 (53.01%), Postives = 61/83 (73.49%), Query Frame = 0
Query:    2 LYKLFLSWHLPVGLVLLVVLGIVWPVPGAWLSASTPLSTVCVVLIFLLSGLKLRTAELAKAVGSPWAVLYGLVMILGLSPCLG 84
            LYK ++ WHLP+GLV++VV G + PVPG WL  +T LST CVV+IF  SG+KL+T E+  A+     V+ GLV+ILG++P +G
Sbjct:   55 LYKFWMKWHLPIGLVVMVVFGFLVPVPGEWLGDNTELSTACVVIIFFFSGMKLKTDEVWTALRDWVGVITGLVLILGVTPLIG 137          
BLAST of mRNA_M-pyrifera_M_contig116790.3477.1 vs. uniprot
Match: A0A7S1C1F2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C1F2_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 7.080e-16
Identity = 38/78 (48.72%), Postives = 52/78 (66.67%), Query Frame = 0
Query:    7 LSWHLPVGLVLLVVLGIVWPVPGAWLSASTPLSTVCVVLIFLLSGLKLRTAELAKAVGSPWAVLYGLVMILGLSPCLG 84
            L WHL   +V  +  G ++P PG W+  +TPL+T+ VV+IF++SG  LRT EL  A+GS  AV  G V IL ++PCLG
Sbjct:   39 LKWHLVFMMVFAIAFGFLFPEPGKWVGENTPLTTIAVVVIFVISGFLLRTKELRDAMGSLGAVALGAVAILAVTPCLG 116          
BLAST of mRNA_M-pyrifera_M_contig116790.3477.1 vs. uniprot
Match: B3RVK8_TRIAD (Uncharacterized protein n=2 Tax=Trichoplax TaxID=10227 RepID=B3RVK8_TRIAD)

HSP 1 Score: 71.2 bits (173), Expect = 1.120e-12
Identity = 39/84 (46.43%), Postives = 60/84 (71.43%), Query Frame = 0
Query:    1 RLYKLFLSWHLPVGLVLLVVLGIVWPVPGAWLSASTPLSTVCVVLIFLLSGLKLRTAELAKAVGSPWAVLYGLVMILGLSPCLG 84
            R+  +  ++HLP+GL++L++ GI+ P PGA+LS  TPL  +C+V IFL SGLKL+T +L KA+ S  A L+GL+ I  ++  +G
Sbjct:   48 RISSILFAYHLPIGLIVLLIFGILVPQPGAYLS-QTPLQYICIVYIFLNSGLKLKTDDLLKALKSFRASLWGLLSIFLVTSVIG 130          
BLAST of mRNA_M-pyrifera_M_contig116790.3477.1 vs. uniprot
Match: C1E9H5_MICCC (Bile Acid:Na+ symporter family n=2 Tax=Micromonas TaxID=38832 RepID=C1E9H5_MICCC)

HSP 1 Score: 63.5 bits (153), Expect = 6.930e-10
Identity = 34/80 (42.50%), Postives = 55/80 (68.75%), Query Frame = 0
Query:   10 HLPVGLVLLVVLGIVWPVPGAWL----SASTPLS-TVCVVLIFLLSGLKLRTAELAKAVGSPWAVLYGLVMILGLSPCLG 84
            +L +G V ++VL + WP+PG  L    S   P++ T C+V+IF +SGL L+TA++ KA+G P A+ YG++ IL ++P +G
Sbjct:   27 YLVLGFVFVIVLALSWPLPGRELGSPKSGDFPIAQTCCIVVIFFISGLTLKTADIKKALGQPAALAYGIITILLVTPMMG 106          
BLAST of mRNA_M-pyrifera_M_contig116790.3477.1 vs. uniprot
Match: A0A8J9S8R4_9CHLO (Probable sodium/metabolite cotransporter BASS4, chloroplas n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9S8R4_9CHLO)

HSP 1 Score: 63.5 bits (153), Expect = 7.140e-10
Identity = 35/79 (44.30%), Postives = 52/79 (65.82%), Query Frame = 0
Query:   11 LPVGLVLLVVLGIVWPVPGA----W-LSASTPLSTVCVVLIFLLSGLKLRTAELAKAVGSPWAVLYGLVMILGLSPCLG 84
            LP+G ++ +V  + WP PG     W +     + TVC+V+IFL+SGL L+T E+  A+  P  ++YGLV ILG++PCLG
Sbjct:   57 LPLGFLVCIVWMLAWPWPGEKVEQWKVKNYGVVETVCIVIIFLISGLALKTEEILFAIKHPGPLIYGLVAILGVTPCLG 135          
BLAST of mRNA_M-pyrifera_M_contig116790.3477.1 vs. uniprot
Match: I0YXV2_COCSC (BASS family transporter: sodium ion/bile acid (Fragment) n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YXV2_COCSC)

HSP 1 Score: 62.0 bits (149), Expect = 2.210e-9
Identity = 33/78 (42.31%), Postives = 51/78 (65.38%), Query Frame = 0
Query:   11 LPVGLVLLVVLGIVWPVPGA----WLSAS-TPLSTVCVVLIFLLSGLKLRTAELAKAVGSPWAVLYGLVMILGLSPCL 83
            LP+G ++ +V  + WP PG     W  A+   + T C+V+IF++SGL L+T E+  A+  P  ++YGLV ILG++PCL
Sbjct:    7 LPIGFLICIVWMLAWPWPGEKVEQWKVANYVVVETACIVVIFVISGLALKTEEITYAIKHPAPLIYGLVAILGVTPCL 84          
BLAST of mRNA_M-pyrifera_M_contig116790.3477.1 vs. uniprot
Match: UPI00139063E6 (probable sodium/metabolite cotransporter BASS4, chloroplastic n=1 Tax=Nematostella vectensis TaxID=45351 RepID=UPI00139063E6)

HSP 1 Score: 60.8 bits (146), Expect = 6.280e-9
Identity = 37/84 (44.05%), Postives = 55/84 (65.48%), Query Frame = 0
Query:    1 RLYKLFLSWHLPVGLVLLVVLGIVWPVPGAWLSASTPLSTVCVVLIFLLSGLKLRTAELAKAVGSPWAVLYGLVMILGLSPCLG 84
            R+ +L L   LP+GLV LV  GI+ P PG +LS   P   +C+V IFL SGLKLRT E+   + +  A++Y +++I+ L+P +G
Sbjct:   30 RIRQLALKNFLPLGLVFLVGFGILLPAPGVFLS-EFPTHYICIVGIFLHSGLKLRTGEIRDTIRAYKALIYQILVIMLLTPIIG 112          
BLAST of mRNA_M-pyrifera_M_contig116790.3477.1 vs. uniprot
Match: A7RYT1_NEMVE (Predicted protein (Fragment) n=1 Tax=Nematostella vectensis TaxID=45351 RepID=A7RYT1_NEMVE)

HSP 1 Score: 60.8 bits (146), Expect = 6.470e-9
Identity = 37/84 (44.05%), Postives = 55/84 (65.48%), Query Frame = 0
Query:    1 RLYKLFLSWHLPVGLVLLVVLGIVWPVPGAWLSASTPLSTVCVVLIFLLSGLKLRTAELAKAVGSPWAVLYGLVMILGLSPCLG 84
            R+ +L L   LP+GLV LV  GI+ P PG +LS   P   +C+V IFL SGLKLRT E+   + +  A++Y +++I+ L+P +G
Sbjct:   30 RIRQLALKNFLPLGLVFLVGFGILLPAPGVFLS-EFPTHYICIVGIFLHSGLKLRTGEIRDTIRAYKALIYQILVIMLLTPIIG 112          
BLAST of mRNA_M-pyrifera_M_contig116790.3477.1 vs. uniprot
Match: A0A7S0SJ85_9CHLO (Hypothetical protein n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0SJ85_9CHLO)

HSP 1 Score: 59.7 bits (143), Expect = 1.590e-8
Identity = 32/79 (40.51%), Postives = 52/79 (65.82%), Query Frame = 0
Query:   11 LPVGLVLLVVLGIVWPVPGAWL----SASTPLS-TVCVVLIFLLSGLKLRTAELAKAVGSPWAVLYGLVMILGLSPCLG 84
            L +G   ++ LG+ WP+PGA L    +   P++ T C+V IF +SGL L+TA++  A+     ++YG++MILG++P LG
Sbjct:   14 LVLGFAAVITLGLSWPLPGAELGDPMAGDFPIAQTCCIVTIFFISGLTLKTADIKNALNEHVGLVYGIIMILGVTPMLG 92          
BLAST of mRNA_M-pyrifera_M_contig116790.3477.1 vs. uniprot
Match: A0A3M6U8Z2_POCDA (Uncharacterized protein n=1 Tax=Pocillopora damicornis TaxID=46731 RepID=A0A3M6U8Z2_POCDA)

HSP 1 Score: 58.9 bits (141), Expect = 2.990e-8
Identity = 35/74 (47.30%), Postives = 52/74 (70.27%), Query Frame = 0
Query:   11 LPVGLVLLVVLGIVWPVPGAWLSASTPLSTVCVVLIFLLSGLKLRTAELAKAVGSPWAVLYGLVMILGLSPCLG 84
            LP+ LV+ V+LGI+ P PG + S   P + VCV+ IFL SGLKL+T E+  A+ S  A+++G+V IL ++P +G
Sbjct:   44 LPISLVVFVILGILVPQPGVFFS-KLPTNYVCVIGIFLHSGLKLKTEEVKDALKSFKAMIWGVVCILFITPVIG 116          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig116790.3477.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5A8CIF7_CAFRO3.190e-1953.01Uncharacterized protein n=5 Tax=Cafeteria roenberg... [more]
A0A7S1C1F2_9STRA7.080e-1648.72Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
B3RVK8_TRIAD1.120e-1246.43Uncharacterized protein n=2 Tax=Trichoplax TaxID=1... [more]
C1E9H5_MICCC6.930e-1042.50Bile Acid:Na+ symporter family n=2 Tax=Micromonas ... [more]
A0A8J9S8R4_9CHLO7.140e-1044.30Probable sodium/metabolite cotransporter BASS4, ch... [more]
I0YXV2_COCSC2.210e-942.31BASS family transporter: sodium ion/bile acid (Fra... [more]
UPI00139063E66.280e-944.05probable sodium/metabolite cotransporter BASS4, ch... [more]
A7RYT1_NEMVE6.470e-944.05Predicted protein (Fragment) n=1 Tax=Nematostella ... [more]
A0A7S0SJ85_9CHLO1.590e-840.51Hypothetical protein n=1 Tax=Mantoniella antarctic... [more]
A0A3M6U8Z2_POCDA2.990e-847.30Uncharacterized protein n=1 Tax=Pocillopora damico... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016833Putative sodium bile acid cotransporterPFAMPF13593SBF_likecoord: 11..83
e-value: 2.2E-9
score: 37.1
IPR016833Putative sodium bile acid cotransporterPANTHERPTHR18640FAMILY NOT NAMEDcoord: 2..84
IPR038770Sodium/solute symporter superfamilyGENE3D1.20.1530.20coord: 6..84
e-value: 1.0E-6
score: 30.0
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 31..52
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 59..79
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 53..58
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..30
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..6
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 80..84
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 7..25
NoneNo IPR availableTMHMMTMhelixcoord: 30..52
NoneNo IPR availableTMHMMTMhelixcoord: 59..81
NoneNo IPR availableTMHMMTMhelixcoord: 7..26

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig116790contigM-pyrifera_M_contig116790:83..334 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig116790.3477.1mRNA_M-pyrifera_M_contig116790.3477.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig116790 83..334 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig116790.3477.1 ID=prot_M-pyrifera_M_contig116790.3477.1|Name=mRNA_M-pyrifera_M_contig116790.3477.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=84bp
RLYKLFLSWHLPVGLVLLVVLGIVWPVPGAWLSASTPLSTVCVVLIFLLS
GLKLRTAELAKAVGSPWAVLYGLVMILGLSPCLG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016833Put_Na-Bile_cotransptr
IPR038770Na+/solute_symporter_sf