prot_M-pyrifera_M_contig116729.3463.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig116729.3463.1
Unique Name	prot_M-pyrifera_M_contig116729.3463.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	185

Homology

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BLAST of mRNA_M-pyrifera_M_contig116729.3463.1 vs. uniprot
Match: A0A5A8D508_CAFRO (T-complex protein 1 subunit epsilon n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8D508_CAFRO)

HSP 1 Score: 280 bits (717), Expect = 1.760e-89
Identity = 136/184 (73.91%), Postives = 160/184 (86.96%), Query Frame = 0

Query:    1 LSSKILSKHKRAMAEIAVDAVLSVADLDRKDVNFDLIKVEGKSGGKMEDTELVRGIVLDKTFAHFQMPSEVKDARVAVVTFPFEPPKPKTKHKLDITSAEAYARLHATEQAYFEEMISKLKAVGATMVICQWGLDDEATHLLVRNKLPTVRWVGGVELELIAIATGARIVPRVSELAPEKLGRA 184
            LSSKI++KHKR MA+IAVDAVLSVADL+R+DVNFDLIKVEGK+GGKMEDTEL+RG+V+DK F+H QMP  VKDAR+A++T PFEPPKPKTKH+LDIT+ EAYA+L   E+AYF+ MI ++   GA MV+CQWG DDEA HLL+RNKLP VRWVGGVELELIAIATG RIVPR  EL  +KLG+A
Sbjct:  169 LSSKIVNKHKREMAQIAVDAVLSVADLERRDVNFDLIKVEGKAGGKMEDTELIRGVVIDKDFSHPQMPKFVKDARIAILTAPFEPPKPKTKHRLDITTPEAYAKLAEAERAYFDRMIRQVLDSGANMVVCQWGFDDEANHLLLRNKLPAVRWVGGVELELIAIATGGRIVPRFEELTADKLGKA 352

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BLAST of mRNA_M-pyrifera_M_contig116729.3463.1 vs. uniprot
Match: A0A7S3PR08_9STRA (T-complex protein 1 subunit epsilon n=3 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PR08_9STRA)

HSP 1 Score: 275 bits (704), Expect = 1.570e-87
Identity = 133/185 (71.89%), Postives = 158/185 (85.41%), Query Frame = 0

Query:    1 LSSKILSKHKRAMAEIAVDAVLSVADLDRKDVNFDLIKVEGKSGGKMEDTELVRGIVLDKTFAHFQMPSEVKDARVAVVTFPFEPPKPKTKHKLDITSAEAYARLHATEQAYFEEMISKLKAVGATMVICQWGLDDEATHLLVRNKLPTVRWVGGVELELIAIATGARIVPRVSELAPEKLGRAG 185
            LSSKI++++K +MAEIAV+AVL+VADL+RKDVNFDLIK+EGK GG +EDT L+ GIVLDK F+H QMP EVKDA++ ++T PFEPPKPKTKHKLDI SAEAY +L+  EQ YF +M+ K+K  GA MVICQWG DDEA HLL++NKLP VRWVGGVE+ELIAIATG RIVPR  EL PEKLG+AG
Sbjct:  169 LSSKIVNRYKESMAEIAVNAVLAVADLERKDVNFDLIKMEGKVGGTLEDTVLINGIVLDKDFSHPQMPKEVKDAKMCILTCPFEPPKPKTKHKLDINSAEAYRKLYEAEQQYFTDMVQKVKDSGANMVICQWGFDDEANHLLLQNKLPAVRWVGGVEIELIAIATGGRIVPRFEELTPEKLGKAG 353

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BLAST of mRNA_M-pyrifera_M_contig116729.3463.1 vs. uniprot
Match: W7TKH6_9STRA (T-complex protein 1 subunit epsilon n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TKH6_9STRA)

HSP 1 Score: 275 bits (703), Expect = 2.210e-87
Identity = 134/185 (72.43%), Postives = 157/185 (84.86%), Query Frame = 0

Query:    1 LSSKILSKHKRAMAEIAVDAVLSVADLDRKDVNFDLIKVEGKSGGKMEDTELVRGIVLDKTFAHFQMPSEVKDARVAVVTFPFEPPKPKTKHKLDITSAEAYARLHATEQAYFEEMISKLKAVGATMVICQWGLDDEATHLLVRNKLPTVRWVGGVELELIAIATGARIVPRVSELAPEKLGRAG 185
            LSSKI++ HK  MA IAVDAVLSVADL+RKDVNFD+IKVEGK GG++EDTELVRGIV+DK  +H QMP  +KDA++A++T PFEPPKPKTKHKLDI+S EAY RL+  EQ YF  M+ + K  GA ++ICQWG DDEA HLL++N+LP VRWVGGVELELIAIATG RIVPR SEL+PEKLGRAG
Sbjct:  169 LSSKIVNIHKSKMARIAVDAVLSVADLERKDVNFDMIKVEGKPGGRLEDTELVRGIVVDKEISHPQMPKTIKDAKIAILTCPFEPPKPKTKHKLDISSREAYERLYEREQEYFTTMVRQCKDSGANLIICQWGFDDEANHLLLQNQLPAVRWVGGVELELIAIATGGRIVPRFSELSPEKLGRAG 353

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BLAST of mRNA_M-pyrifera_M_contig116729.3463.1 vs. uniprot
Match: A0A7R9U5R8_9STRA (T-complex protein 1 subunit epsilon n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U5R8_9STRA)

HSP 1 Score: 272 bits (696), Expect = 2.890e-86
Identity = 133/185 (71.89%), Postives = 152/185 (82.16%), Query Frame = 0

Query:    1 LSSKILSKHKRAMAEIAVDAVLSVADLDRKDVNFDLIKVEGKSGGKMEDTELVRGIVLDKTFAHFQMPSEVKDARVAVVTFPFEPPKPKTKHKLDITSAEAYARLHATEQAYFEEMISKLKAVGATMVICQWGLDDEATHLLVRNKLPTVRWVGGVELELIAIATGARIVPRVSELAPEKLGRAG 185
            LSSKI++ HK  MA+IAVDAVLSVAD++R DVNFD+IKVEGK GG +EDTEL+RGIV+DK F+H QMP +V  A++ ++T PFEPPKPKTKHKLDITS   Y RLH  EQ +FE+M+ K+K  GA MVICQWG DDEA HLL RN LP VRWVGGVELELIAIATG RIVPR SEL PEKLG AG
Sbjct:  176 LSSKIINVHKTKMAKIAVDAVLSVADMERHDVNFDMIKVEGKPGGSLEDTELIRGIVIDKEFSHPQMPKQVDGAKMCILTCPFEPPKPKTKHKLDITSRSDYERLHKIEQQHFEDMVQKVKDSGANMVICQWGFDDEANHLLYRNNLPAVRWVGGVELELIAIATGGRIVPRFSELTPEKLGHAG 360

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BLAST of mRNA_M-pyrifera_M_contig116729.3463.1 vs. uniprot
Match: A0A7S2SNU9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SNU9_9STRA)

HSP 1 Score: 269 bits (687), Expect = 3.480e-86
Identity = 131/185 (70.81%), Postives = 158/185 (85.41%), Query Frame = 0

Query:    1 LSSKILSKHKRAMAEIAVDAVLSVADLDRKDVNFDLIKVEGKSGGKMEDTELVRGIVLDKTFAHFQMPSEVKDARVAVVTFPFEPPKPKTKHKLDITSAEAYARLHATEQAYFEEMISKLKAVGATMVICQWGLDDEATHLLVRNKLPTVRWVGGVELELIAIATGARIVPRVSELAPEKLGRAG 185
            LSSKI++ H+  MA+IAVDAVL+VADLDR DVNFDLIK+EGK GG++++TELV+GIV+DK F+H QMP  V+DA++ ++T PFEPPKPKTKHKLDITS EAY +L+  EQAYF+EM+ + K  GA +VICQWG DDEA HLL++N LP VRWVGGVELELIAIATG RIVPR SEL+ EKLGRAG
Sbjct:   67 LSSKIINVHRDQMAKIAVDAVLAVADLDRHDVNFDLIKMEGKPGGRLDETELVQGIVVDKDFSHPQMPKVVEDAKMCILTCPFEPPKPKTKHKLDITSREAYEKLYDQEQAYFKEMVQQCKDCGANLVICQWGFDDEANHLLLQNDLPAVRWVGGVELELIAIATGGRIVPRFSELSAEKLGRAG 251

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BLAST of mRNA_M-pyrifera_M_contig116729.3463.1 vs. uniprot
Match: A0A6T5Q400_HETAK (T-complex protein 1 subunit epsilon n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5Q400_HETAK)

HSP 1 Score: 271 bits (692), Expect = 9.600e-86
Identity = 132/185 (71.35%), Postives = 155/185 (83.78%), Query Frame = 0

Query:    1 LSSKILSKHKRAMAEIAVDAVLSVADLDRKDVNFDLIKVEGKSGGKMEDTELVRGIVLDKTFAHFQMPSEVKDARVAVVTFPFEPPKPKTKHKLDITSAEAYARLHATEQAYFEEMISKLKAVGATMVICQWGLDDEATHLLVRNKLPTVRWVGGVELELIAIATGARIVPRVSELAPEKLGRAG 185
            LSSKI++ HK  MA IAV+AVLSVADL+R DVNFD+IK+ GK GG++E+TEL+ GIV+DK ++H QMP EV+DAR+ ++T PFEPPKPKTKHKLDITS EAY RLHA EQ YF  M+ + K  GA +VICQWG DDEA HLL++N+LP VRWVGGVELELIAIATG RIVPR  ELAPEKLGRAG
Sbjct:  169 LSSKIINIHKDRMARIAVEAVLSVADLERHDVNFDMIKMTGKPGGRLEETELIHGIVIDKEWSHAQMPKEVRDARMCILTCPFEPPKPKTKHKLDITSREAYDRLHAREQEYFGTMVRQCKESGANVVICQWGFDDEANHLLLQNQLPAVRWVGGVELELIAIATGGRIVPRFGELAPEKLGRAG 353

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BLAST of mRNA_M-pyrifera_M_contig116729.3463.1 vs. uniprot
Match: A0A835ZI55_9STRA (T-complex protein 1 subunit epsilon n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZI55_9STRA)

HSP 1 Score: 270 bits (689), Expect = 3.320e-85
Identity = 130/185 (70.27%), Postives = 155/185 (83.78%), Query Frame = 0

Query:    1 LSSKILSKHKRAMAEIAVDAVLSVADLDRKDVNFDLIKVEGKSGGKMEDTELVRGIVLDKTFAHFQMPSEVKDARVAVVTFPFEPPKPKTKHKLDITSAEAYARLHATEQAYFEEMISKLKAVGATMVICQWGLDDEATHLLVRNKLPTVRWVGGVELELIAIATGARIVPRVSELAPEKLGRAG 185
            LSSKI++ HKR MAEI V+AVL+VAD++RKDVNFD+IKV+GK GG++ DTELVRGIV+DK F+H QMP E+KDA++ ++T PFEPPKPKTKHKLDITS EAY RLH  EQ YF+ M+ + K  GA +VICQWG DDEA HLL++N LP VRWVGGVELELIAIATG RIVPR  EL+ +KLG AG
Sbjct:  176 LSSKIINVHKRQMAEICVNAVLAVADMERKDVNFDMIKVDGKPGGELGDTELVRGIVIDKEFSHPQMPKEIKDAKLCILTCPFEPPKPKTKHKLDITSKEAYERLHEREQQYFDTMVKQCKDSGANLVICQWGFDDEANHLLLQNDLPAVRWVGGVELELIAIATGGRIVPRFQELSADKLGYAG 360

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BLAST of mRNA_M-pyrifera_M_contig116729.3463.1 vs. uniprot
Match: A0A6A6KUX7_HEVBR (Uncharacterized protein n=1 Tax=Hevea brasiliensis TaxID=3981 RepID=A0A6A6KUX7_HEVBR)

HSP 1 Score: 263 bits (673), Expect = 7.790e-85
Identity = 127/185 (68.65%), Postives = 153/185 (82.70%), Query Frame = 0

Query:    1 LSSKILSKHKRAMAEIAVDAVLSVADLDRKDVNFDLIKVEGKSGGKMEDTELVRGIVLDKTFAHFQMPSEVKDARVAVVTFPFEPPKPKTKHKLDITSAEAYARLHATEQAYFEEMISKLKAVGATMVICQWGLDDEATHLLVRNKLPTVRWVGGVELELIAIATGARIVPRVSELAPEKLGRAG 185
            LSSKI+++ KR++AEIAV AVL+VADL+RKDVN DLIKVEGK GGK+EDTEL+ GIV+DK  +H QMP ++KDA++A++T PFEPPKPKTKHK+DI + E +  L   EQ YF++M+ K K VGAT+VICQWG DDEA HLL+   LP VRWVGGVELELIAIATG RIVPR  EL PEKLG+AG
Sbjct:  134 LSSKIVNRCKRSLAEIAVKAVLAVADLERKDVNLDLIKVEGKVGGKLEDTELIYGIVVDKDMSHPQMPKQIKDAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRKQEQQYFDDMVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGKAG 318

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BLAST of mRNA_M-pyrifera_M_contig116729.3463.1 vs. uniprot
Match: Q7XBP0_BIGNA (Chaperonin-containing TCP-1 epsilon subunit (Fragment) n=1 Tax=Bigelowiella natans TaxID=227086 RepID=Q7XBP0_BIGNA)

HSP 1 Score: 261 bits (667), Expect = 7.960e-85
Identity = 127/185 (68.65%), Postives = 153/185 (82.70%), Query Frame = 0

Query:    1 LSSKILSKHKRAMAEIAVDAVLSVADLDRKDVNFDLIKVEGKSGGKMEDTELVRGIVLDKTFAHFQMPSEVKDARVAVVTFPFEPPKPKTKHKLDITSAEAYARLHATEQAYFEEMISKLKAVGATMVICQWGLDDEATHLLVRNKLPTVRWVGGVELELIAIATGARIVPRVSELAPEKLGRAG 185
            L SKI+S+ ++ M+EIAV+AVLSVADL RKDVNF+LIKVEGK GG++EDT LV+GIVLDK  AH QM  E+KDA++A++T PFEPPKPKTKHK+DI+SAE+Y  L+  EQ YF +M+ K K  GAT+V+CQWG DDEATHLL+ NKLP VRWVGGVE+EL+AIAT ARIVPR  EL   KLG AG
Sbjct:   55 LGSKIISRFQKQMSEIAVNAVLSVADLKRKDVNFELIKVEGKVGGRLEDTMLVKGIVLDKEIAHSQMAKEIKDAKIAILTCPFEPPKPKTKHKIDISSAESYQNLYDREQKYFRDMVKKCKDSGATLVLCQWGFDDEATHLLMHNKLPAVRWVGGVEIELLAIATDARIVPRFEELDSSKLGTAG 239

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BLAST of mRNA_M-pyrifera_M_contig116729.3463.1 vs. uniprot
Match: A0A7S1GCY1_9STRA (T-complex protein 1 subunit epsilon n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GCY1_9STRA)

HSP 1 Score: 268 bits (685), Expect = 1.100e-84
Identity = 134/185 (72.43%), Postives = 156/185 (84.32%), Query Frame = 0

Query:    1 LSSKILSKHKRAMAEIAVDAVLSVADLDRKDVNFDLIKVEGKSGGKMEDTELVRGIVLDKTFAHFQMPSEVKDARVAVVTFPFEPPKPKTKHKLDITSAEAYARLHATEQAYFEEMISKLKAVGATMVICQWGLDDEATHLLVRNKLPTVRWVGGVELELIAIATGARIVPRVSELAPEKLGRAG 185
            LSSKI+++HKR MAEIAV AVLSVADL+RKDVNFD IKVEGK GGKMEDTELV GIVLDK F+H  M  ++ DAR+AV+T PFEPPKPKTKH LDITSA+ Y RL   E+AYF+ MI ++K  GA MVICQWG DDEA HLL+++KLP VRWVGGVELEL+AIAT ARI+PR SE++ EKLG+AG
Sbjct:  169 LSSKIVNRHKRKMAEIAVQAVLSVADLERKDVNFDHIKVEGKPGGKMEDTELVHGIVLDKEFSHPSMQKDIVDARMAVLTCPFEPPKPKTKHTLDITSADDYRRLAEQERAYFDTMIKQIKDSGANMVICQWGFDDEANHLLLQHKLPAVRWVGGVELELLAIATDARIIPRFSEVSAEKLGKAG 353

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig116729.3463.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig116729.3463.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A5A8D508_CAFRO	1.760e-89	73.91	T-complex protein 1 subunit epsilon n=1 Tax=Cafete...	[more]
A0A7S3PR08_9STRA	1.570e-87	71.89	T-complex protein 1 subunit epsilon n=3 Tax=Aplano...	[more]
W7TKH6_9STRA	2.210e-87	72.43	T-complex protein 1 subunit epsilon n=2 Tax=Monodo...	[more]
A0A7R9U5R8_9STRA	2.890e-86	71.89	T-complex protein 1 subunit epsilon n=1 Tax=Pingui...	[more]
A0A7S2SNU9_9STRA	3.480e-86	70.81	Hypothetical protein n=1 Tax=Rhizochromulina marin...	[more]
A0A6T5Q400_HETAK	9.600e-86	71.35	T-complex protein 1 subunit epsilon n=1 Tax=Hetero...	[more]
A0A835ZI55_9STRA	3.320e-85	70.27	T-complex protein 1 subunit epsilon n=1 Tax=Tribon...	[more]
A0A6A6KUX7_HEVBR	7.790e-85	68.65	Uncharacterized protein n=1 Tax=Hevea brasiliensis...	[more]
Q7XBP0_BIGNA	7.960e-85	68.65	Chaperonin-containing TCP-1 epsilon subunit (Fragm...	[more]
A0A7S1GCY1_9STRA	1.100e-84	72.43	T-complex protein 1 subunit epsilon n=1 Tax=Bicoso...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027409	GroEL-like apical domain superfamily	GENE3D	3.50.7.10		coord: 55..185 e-value: 2.9E-54 score: 185.1
IPR027409	GroEL-like apical domain superfamily	SUPERFAMILY	52029	GroEL apical domain-like	coord: 49..185
IPR002423	Chaperonin Cpn60/TCP-1 family	PFAM	PF00118	Cpn60_TCP1	coord: 1..184 e-value: 2.1E-44 score: 152.0
None	No IPR available	PANTHER	PTHR11353:SF187		coord: 1..185
None	No IPR available	PANTHER	PTHR11353	CHAPERONIN	coord: 1..185
IPR027410	TCP-1-like chaperonin intermediate domain superfamily	SUPERFAMILY	54849	GroEL-intermediate domain like	coord: 1..55

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig116729	contig	M-pyrifera_M_contig116729:3..557 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig116729.3463.1	mRNA_M-pyrifera_M_contig116729.3463.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig116729 3..557 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig116729.3463.1 ID=prot_M-pyrifera_M_contig116729.3463.1|Name=mRNA_M-pyrifera_M_contig116729.3463.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=185bp
LSSKILSKHKRAMAEIAVDAVLSVADLDRKDVNFDLIKVEGKSGGKMEDT
ELVRGIVLDKTFAHFQMPSEVKDARVAVVTFPFEPPKPKTKHKLDITSAE
AYARLHATEQAYFEEMISKLKAVGATMVICQWGLDDEATHLLVRNKLPTV
RWVGGVELELIAIATGARIVPRVSELAPEKLGRAG

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR027409	GroEL-like_apical_dom_sf
IPR002423	Cpn60/TCP-1
IPR027410	TCP-1-like_intermed_sf