prot_M-pyrifera_M_contig116537.3437.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig116537.3437.1
Unique Nameprot_M-pyrifera_M_contig116537.3437.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length158
Homology
BLAST of mRNA_M-pyrifera_M_contig116537.3437.1 vs. uniprot
Match: L8GF10_ACACA (Endonuclease III, putative n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GF10_ACACA)

HSP 1 Score: 82.0 bits (201), Expect = 3.220e-15
Identity = 53/157 (33.76%), Postives = 81/157 (51.59%), Query Frame = 0
Query:    2 VRALFLPSGGMNMKFLPKFAFVLAYAVSVKDGRFSSVTAAADGSIDTSQLESSREKIMAVSRLCLKRSGDAQQESIAQQLDRHLGLPVIGMGVQLYIGSFLRKSTFYSSSYSSACTPIYLHLLRRIAELHALQRPSVFGLLVDCFHLDLDLDALAAV 158
            +R +F P+  ++  ++ K+ FVLAYA SV+D R         G +D   L  +   + AV  +C   +  ++ ++ A  L  +L  PV+ MG+  +I + L    +Y +S  +  TP YL LLR IA  H  Q         +CF +D DLDALAAV
Sbjct:  304 IRDMFSPARSISPNYILKYFFVLAYAASVRDDRIFG------GKLDKEMLTPTMSALKAVQPICQGNTLGSELQAAAHDLRTNLSYPVVAMGIIHWIRTNLTDPAYYVTSIKTVRTPFYLELLREIAYKHPFQ---------ECFTIDYDLDALAAV 445          
BLAST of mRNA_M-pyrifera_M_contig116537.3437.1 vs. uniprot
Match: A0A0H5R8A1_9EUKA (Uncharacterized protein (Fragment) n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5R8A1_9EUKA)

HSP 1 Score: 71.2 bits (173), Expect = 1.820e-11
Identity = 47/141 (33.33%), Postives = 73/141 (51.77%), Query Frame = 0
Query:   23 VLAYAVSVKDGR----FSSVTAAADGS-IDTSQLESSREKIMAVSRLCLKRSGDAQQESIAQQLDRHLGLPVIGMGVQLYIGSFLRKSTFYSSSYSSACTPIYLHLLRRIAELHALQRPSVFGLLVDCFHLDLDLDALAAV 158
            +LAYA  V+D R     SS+ +  D + +D S++ ++   +  +S +C  +            L  H+ LPV    +  +I   L    +YS++Y S CTP+++ LL  I+ LH+L RP VF LL   FHL  DL  LA +
Sbjct:  384 LLAYASCVRDHRQWFGASSIQSRLDDTLVDKSRMNATIAALNEISAICQNKEFGFHIVQSEPMLHAHVPLPVCSCAILHWIKLSLLSPAYYSTTYQSVCTPVFIRLLGVISTLHSLLRPGVFSLLCATFHLKTDLHDLAVI 524          
BLAST of mRNA_M-pyrifera_M_contig116537.3437.1 vs. uniprot
Match: A0A1V9YFW1_9STRA (Negative elongation factor n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YFW1_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 1.040e-9
Identity = 47/146 (32.19%), Postives = 72/146 (49.32%), Query Frame = 0
Query:    1 LVRALFLPSGGMNMKFLPKFAFVLAYAVSVKDGRFSSVTAAADGSIDTSQLESSREKIMAVSRLCLKR---SGDAQQESIAQQLDRHLGLPVIGMGVQLYIGSFLRKSTFYSSSYSSACTPIYLHLLRRIAELHALQRPSVFGLLV 143
            L  ALF P   +        A+VLAYA SV DGR  S+      ++    LE+    ++  S +C      S +  +    ++L R +  PV+ MGV  ++   L   +F +  +  AC P++L LLR   ELH +Q P+VF +LV
Sbjct:  529 LTDALFHPYESIGEAHRAACAYVLAYAGSVVDGR--SLLDTQPATLTPPPLEAIVTALVEASAICKSETTLSYNMHESEAVEKLQRAMETPVVAMGVLHWLSRLLESKSFLNGPFLHACFPVFLKLLRHDVELHMVQWPTVFRVLV 672          
BLAST of mRNA_M-pyrifera_M_contig116537.3437.1 vs. uniprot
Match: A0A1V9ZY20_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZY20_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 3.890e-9
Identity = 44/147 (29.93%), Postives = 68/147 (46.26%), Query Frame = 0
Query:    1 LVRALFLPSGGMNMKFLPKFAFVLAYAVSVKDGR-FSSVTAAADGSIDTSQLESSREKIMAVSRLCLKR---SGDAQQESIAQQLDRHLGLPVIGMGVQLYIGSFLRKSTFYSSSYSSACTPIYLHLLRRIAELHALQRPSVFGLLV 143
            L  ALF P   +        A++LAYA S  D R     T     S +   LE   + +   S +C      S +  +     +L + +  PV+ MGV  ++G  L   +FY+  +  AC P++L L+R   ELH +Q P VF +L+
Sbjct: 1063 LTDALFHPFESITESHRASCAYILAYAASAVDDRSLLDTTPHNSSSFELPSLEPITKALQEASLVCKSETTLSYNMHESEAVDKLVKTMDSPVVSMGVLHWLGRLLESKSFYNGPFLHACFPVFLKLMRHGIELHTVQWPIVFNVLI 1209          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig116537.3437.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
L8GF10_ACACA3.220e-1533.76Endonuclease III, putative n=1 Tax=Acanthamoeba ca... [more]
A0A0H5R8A1_9EUKA1.820e-1133.33Uncharacterized protein (Fragment) n=1 Tax=Spongos... [more]
A0A1V9YFW1_9STRA1.040e-932.19Negative elongation factor n=1 Tax=Achlya hypogyna... [more]
A0A1V9ZY20_9STRA3.890e-929.93Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006942TH1 proteinPFAMPF04858TH1coord: 1..148
e-value: 6.1E-16
score: 58.2
IPR006942TH1 proteinPANTHERPTHR12144TH1 PROTEIN-RELATEDcoord: 1..148

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig116537contigM-pyrifera_M_contig116537:2..475 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig116537.3437.1mRNA_M-pyrifera_M_contig116537.3437.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig116537 2..475 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig116537.3437.1 ID=prot_M-pyrifera_M_contig116537.3437.1|Name=mRNA_M-pyrifera_M_contig116537.3437.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=158bp
LVRALFLPSGGMNMKFLPKFAFVLAYAVSVKDGRFSSVTAAADGSIDTSQ
LESSREKIMAVSRLCLKRSGDAQQESIAQQLDRHLGLPVIGMGVQLYIGS
FLRKSTFYSSSYSSACTPIYLHLLRRIAELHALQRPSVFGLLVDCFHLDL
DLDALAAV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006942TH1