prot_M-pyrifera_M_contig116451.3425.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig116451.3425.1
Unique Nameprot_M-pyrifera_M_contig116451.3425.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length111
Homology
BLAST of mRNA_M-pyrifera_M_contig116451.3425.1 vs. uniprot
Match: A0A7J6Q8B4_PEROL (Transducin (Beta)-like 3 (Fragment) n=1 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6Q8B4_PEROL)

HSP 1 Score: 73.9 bits (180), Expect = 2.450e-13
Identity = 32/57 (56.14%), Postives = 43/57 (75.44%), Query Frame = 0
Query:   13 TLLGHRRGVWDVAFSPVDKLLASSAGDGHVRVWRIDDGACIRTLQGHPNSALCVTFL 69
            T  GHRRGVW V FSPVDK+LAS++GD  +++W + D  CIRT QGH ++ L V+F+
Sbjct:   20 TCTGHRRGVWGVDFSPVDKVLASASGDSLLKLWNLVDYTCIRTFQGHEHAVLNVSFI 76          
BLAST of mRNA_M-pyrifera_M_contig116451.3425.1 vs. uniprot
Match: A0A316UKA1_9BASI (WD40 repeat-like protein n=1 Tax=Jaminaea rosea TaxID=1569628 RepID=A0A316UKA1_9BASI)

HSP 1 Score: 74.3 bits (181), Expect = 3.350e-13
Identity = 31/70 (44.29%), Postives = 47/70 (67.14%), Query Frame = 0
Query:    8 LAPIRTLLGHRRGVWDVAFSPVDKLLASSAGDGHVRVWRIDDGACIRTLQGHPNSALCVTFLPGASSNAL 77
            L+P+ TL GH+RGVW VAFSPVD  + +++GD   ++W + D AC++T +GH +S L   FL G+    +
Sbjct:  559 LSPLATLKGHKRGVWSVAFSPVDPAILTTSGDRTAKLWSLRDFACVKTFEGHSHSVLKGRFLQGSKGTQI 628          
BLAST of mRNA_M-pyrifera_M_contig116451.3425.1 vs. uniprot
Match: A0A7S0UMX7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0UMX7_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 4.060e-13
Identity = 30/53 (56.60%), Postives = 41/53 (77.36%), Query Frame = 0
Query:   14 LLGHRRGVWDVAFSPVDKLLASSAGDGHVRVWRIDDGACIRTLQGHPNSALCV 66
            L GHRRGVWD  FSP+DK+LA+S+GD  +++W + D +C+RT QGH +S L V
Sbjct:    1 LKGHRRGVWDCQFSPIDKVLATSSGDKTIKLWSLSDYSCVRTFQGHLSSVLRV 53          
BLAST of mRNA_M-pyrifera_M_contig116451.3425.1 vs. uniprot
Match: A0A7S1NX73_9ALVE (Hypothetical protein (Fragment) n=1 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A7S1NX73_9ALVE)

HSP 1 Score: 72.4 bits (176), Expect = 7.080e-13
Identity = 30/58 (51.72%), Postives = 43/58 (74.14%), Query Frame = 0
Query:   16 GHRRGVWDVAFSPVDKLLASSAGDGHVRVWRIDDGACIRTLQGH--PNSALCVTFLPG 71
            GHR+ VW++ FSPVD++LAS++GDG  R+W + D  C++T QGH  P+  L V+FL G
Sbjct:   60 GHRKTVWNICFSPVDRVLASASGDGTARIWNLKDYTCVKTFQGHESPHGVLRVSFLSG 117          
BLAST of mRNA_M-pyrifera_M_contig116451.3425.1 vs. uniprot
Match: A0A0G4GY15_VITBC (Utp13 domain-containing protein n=3 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4GY15_VITBC)

HSP 1 Score: 72.4 bits (176), Expect = 1.590e-12
Identity = 30/58 (51.72%), Postives = 43/58 (74.14%), Query Frame = 0
Query:   16 GHRRGVWDVAFSPVDKLLASSAGDGHVRVWRIDDGACIRTLQGH--PNSALCVTFLPG 71
            GHR+ VW++ FSPVD++LAS++GDG  R+W + D  C++T QGH  P+  L V+FL G
Sbjct:  591 GHRKTVWNICFSPVDRVLASASGDGTARIWNLKDYTCVKTFQGHESPHGVLRVSFLSG 648          
BLAST of mRNA_M-pyrifera_M_contig116451.3425.1 vs. uniprot
Match: A0A7S0C1P0_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C1P0_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 2.770e-12
Identity = 42/93 (45.16%), Postives = 56/93 (60.22%), Query Frame = 0
Query:    1 KLWDAHTLAP------------IRTLL-GHRRGVWDVAFSPVDKLLASSAGDGHVRVW---RIDDGA------CIRTLQGHPNSALCVTFLPG 71
            KLW+  TL+             +R +L GH+RGVWDVAFSP D++LAS +GDG V++W   R +D +      C+RT QGH +S L V FL G
Sbjct:  121 KLWNNPTLSKSNNNTTSNSSLTLRAILKGHKRGVWDVAFSPHDRVLASGSGDGTVKLWSLGRNNDTSPAGGCRCVRTFQGHSSSVLRVRFLSG 213          
BLAST of mRNA_M-pyrifera_M_contig116451.3425.1 vs. uniprot
Match: W4KLH4_HETIT (Utp13 domain-containing protein n=1 Tax=Heterobasidion irregulare (strain TC 32-1) TaxID=747525 RepID=W4KLH4_HETIT)

HSP 1 Score: 70.1 bits (170), Expect = 1.030e-11
Identity = 31/67 (46.27%), Postives = 46/67 (68.66%), Query Frame = 0
Query:    8 LAPIRTLLGHRRGVWDVAFSPVDKLLASSAGDGHVRVWRIDDGACIRTLQGHPNSALCVTFLPGASS 74
            +A + T  GH+RGVW V F+  +++LAS  GD  VR+W ++D AC++ L+GH NS L V +L GA +
Sbjct:  602 IALLGTCRGHKRGVWSVRFARHERVLASGGGDRTVRLWSLEDFACLKVLEGHANSVLRVEWLSGADA 668          
BLAST of mRNA_M-pyrifera_M_contig116451.3425.1 vs. uniprot
Match: A0A4S4LPK6_9AGAM (Utp13 domain-containing protein n=1 Tax=Bondarzewia mesenterica TaxID=1095465 RepID=A0A4S4LPK6_9AGAM)

HSP 1 Score: 67.0 bits (162), Expect = 1.240e-10
Identity = 29/59 (49.15%), Postives = 41/59 (69.49%), Query Frame = 0
Query:   11 IRTLLGHRRGVWDVAFSPVDKLLASSAGDGHVRVWRIDDGACIRTLQGHPNSALCVTFL 69
            + T  GH+RGVW V F+  +++LAS  GD  VR+W +DD AC++ L+GH NS L V +L
Sbjct:  614 VGTCRGHKRGVWSVRFAKHERVLASGGGDRTVRIWGLDDFACMKVLEGHVNSVLRVEWL 672          
BLAST of mRNA_M-pyrifera_M_contig116451.3425.1 vs. uniprot
Match: UPI00140396EC (transducin beta-like protein 3 n=1 Tax=Petromyzon marinus TaxID=7757 RepID=UPI00140396EC)

HSP 1 Score: 65.9 bits (159), Expect = 3.150e-10
Identity = 26/50 (52.00%), Postives = 39/50 (78.00%), Query Frame = 0
Query:    8 LAPIRTLLGHRRGVWDVAFSPVDKLLASSAGDGHVRVWRIDDGACIRTLQ 57
            + P+  L GHRRGVW VAFSP+D+++AS++ DG VR+W + D AC++T +
Sbjct:  538 VGPVAVLRGHRRGVWAVAFSPMDQVVASASADGSVRLWGLHDFACLKTFE 587          
BLAST of mRNA_M-pyrifera_M_contig116451.3425.1 vs. uniprot
Match: A0A7S3BFW1_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3BFW1_9VIRI)

HSP 1 Score: 65.1 bits (157), Expect = 4.850e-10
Identity = 27/50 (54.00%), Postives = 37/50 (74.00%), Query Frame = 0
Query:    7 TLAPIRTLLGHRRGVWDVAFSPVDKLLASSAGDGHVRVWRIDDGACIRTL 56
            +L P   L GHRRGVW VAFSP D+++A+++GD  VR+W + D  C+RTL
Sbjct:    2 SLVPAGVLRGHRRGVWSVAFSPTDRVVATASGDRTVRLWTVADCVCVRTL 51          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig116451.3425.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7J6Q8B4_PEROL2.450e-1356.14Transducin (Beta)-like 3 (Fragment) n=1 Tax=Perkin... [more]
A0A316UKA1_9BASI3.350e-1344.29WD40 repeat-like protein n=1 Tax=Jaminaea rosea Ta... [more]
A0A7S0UMX7_9STRA4.060e-1356.60Hypothetical protein (Fragment) n=1 Tax=Pseudo-nit... [more]
A0A7S1NX73_9ALVE7.080e-1351.72Hypothetical protein (Fragment) n=1 Tax=Vitrella b... [more]
A0A0G4GY15_VITBC1.590e-1251.72Utp13 domain-containing protein n=3 Tax=Vitrella b... [more]
A0A7S0C1P0_9STRA2.770e-1245.16Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
W4KLH4_HETIT1.030e-1146.27Utp13 domain-containing protein n=1 Tax=Heterobasi... [more]
A0A4S4LPK6_9AGAM1.240e-1049.15Utp13 domain-containing protein n=1 Tax=Bondarzewi... [more]
UPI00140396EC3.150e-1052.00transducin beta-like protein 3 n=1 Tax=Petromyzon ... [more]
A0A7S3BFW1_9VIRI4.850e-1054.00Hypothetical protein n=1 Tax=Prasinoderma singular... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 49..91
e-value: 9.0E-6
score: 35.2
coord: 7..46
e-value: 1.9E-9
score: 47.4
IPR001680WD40 repeatPFAMPF00400WD40coord: 50..91
e-value: 1.1E-5
score: 26.0
coord: 10..45
e-value: 5.9E-8
score: 33.3
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 14..55
score: 14.92
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 56..100
score: 11.879
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..111
e-value: 2.6E-34
score: 120.4
NoneNo IPR availablePANTHERPTHR19854TRANSDUCIN BETA-LIKE 3coord: 1..111
NoneNo IPR availablePANTHERPTHR19854:SF15TRANSDUCIN BETA-LIKE PROTEIN 3coord: 1..111
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 1..111
score: 28.265
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 1..111

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig116451contigM-pyrifera_M_contig116451:224..556 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig116451.3425.1mRNA_M-pyrifera_M_contig116451.3425.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig116451 224..556 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig116451.3425.1 ID=prot_M-pyrifera_M_contig116451.3425.1|Name=mRNA_M-pyrifera_M_contig116451.3425.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=111bp
KLWDAHTLAPIRTLLGHRRGVWDVAFSPVDKLLASSAGDGHVRVWRIDDG
ACIRTLQGHPNSALCVTFLPGASSNALLASGGAEGALRVWDVAESTCVSV
IDAHKDRIWAI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf