prot_M-pyrifera_M_contig116369.3396.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig116369.3396.1
Unique Name	prot_M-pyrifera_M_contig116369.3396.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	171

Homology

[Close]

BLAST of mRNA_M-pyrifera_M_contig116369.3396.1 vs. uniprot
Match: A0A1J1GFC0_9SPER (Splicing factor 3B subunit (Fragment) n=13 Tax=Keteleeria TaxID=3323 RepID=A0A1J1GFC0_9SPER)

HSP 1 Score: 275 bits (703), Expect = 7.740e-92
Identity = 142/171 (83.04%), Postives = 152/171 (88.89%), Query Frame = 0

Query:    1 MVMEAIERIVSSLGVSDIEPRLEELLIDGILYAFQEQKTDDTKVMLSGFGTVVNALGVRVKPYLNQIVSTIKWRLNLKSAKVRQQAADLVSRIAGVMMKCDAEQLMGHLGVVLFEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLPPILNNRHEKVQENCI 171
            MVME IE++V++LG SDI+ RLEELLIDGILYAFQEQ +DD  VML+GFG VVNAL  RVKPYL QI  TIKWRLN KSAKVRQQAADL+SRIA VM +C  EQLMGHLGVVL+EYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRL PIL NRHEKVQENCI
Sbjct:   31 MVMETIEKVVANLGASDIDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNALSQRVKPYLPQICGTIKWRLNNKSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCI 201

[Close]

BLAST of mRNA_M-pyrifera_M_contig116369.3396.1 vs. uniprot
Match: A0A392P898_9FABA (Splicing factor 3B subunit 1-like (Fragment) n=1 Tax=Trifolium medium TaxID=97028 RepID=A0A392P898_9FABA)

HSP 1 Score: 271 bits (694), Expect = 5.490e-90
Identity = 140/171 (81.87%), Postives = 152/171 (88.89%), Query Frame = 0

Query:    1 MVMEAIERIVSSLGVSDIEPRLEELLIDGILYAFQEQKTDDTKVMLSGFGTVVNALGVRVKPYLNQIVSTIKWRLNLKSAKVRQQAADLVSRIAGVMMKCDAEQLMGHLGVVLFEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLPPILNNRHEKVQENCI 171
            MVME IE++V++LG SDI+ RLEELLIDGILYAFQEQ +DD  VML+GFG VVN+LG RVKPYL QI  TIKWRLN KSAKVRQQAADL+SRIA VM +C  EQLMGHLGVVL+EYLGEEYPEVLGSILGALK+IVNVIGMTKMTPPIKDLLPRL PIL N HEKVQENCI
Sbjct:    1 MVMETIEKVVTNLGSSDIDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNNKSAKVRQQAADLISRIAVVMKQCHEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKSIVNVIGMTKMTPPIKDLLPRLTPILKNXHEKVQENCI 171

[Close]

BLAST of mRNA_M-pyrifera_M_contig116369.3396.1 vs. uniprot
Match: A0A835Q468_VANPL (TOG domain-containing protein n=5 Tax=Vanilla planifolia TaxID=51239 RepID=A0A835Q468_VANPL)

HSP 1 Score: 276 bits (706), Expect = 5.390e-88
Identity = 143/171 (83.63%), Postives = 153/171 (89.47%), Query Frame = 0

Query:    1 MVMEAIERIVSSLGVSDIEPRLEELLIDGILYAFQEQKTDDTKVMLSGFGTVVNALGVRVKPYLNQIVSTIKWRLNLKSAKVRQQAADLVSRIAGVMMKCDAEQLMGHLGVVLFEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLPPILNNRHEKVQENCI 171
            MVME IE++V++LG SDI+ RLEELLIDGILYAFQEQ +DD  VML+GFG VVNALG RVKPYL QI  TIKWRLN KSAKVRQQAADL+SRIA VM +C  EQLMGHLGVVL+EYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRL PIL NRHEKVQENCI
Sbjct:  259 MVMETIEKVVANLGASDIDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNALGQRVKPYLPQIRGTIKWRLNNKSAKVRQQAADLISRIAVVMKQCHEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCI 429

[Close]

BLAST of mRNA_M-pyrifera_M_contig116369.3396.1 vs. uniprot
Match: A0A2K3LVV7_TRIPR (Splicing factor 3B subunit 1-like protein n=2 Tax=rosids TaxID=71275 RepID=A0A2K3LVV7_TRIPR)

HSP 1 Score: 274 bits (700), Expect = 8.680e-88
Identity = 141/171 (82.46%), Postives = 153/171 (89.47%), Query Frame = 0

Query:    1 MVMEAIERIVSSLGVSDIEPRLEELLIDGILYAFQEQKTDDTKVMLSGFGTVVNALGVRVKPYLNQIVSTIKWRLNLKSAKVRQQAADLVSRIAGVMMKCDAEQLMGHLGVVLFEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLPPILNNRHEKVQENCI 171
            MVME IE++V++LG SDI+ RLEELLIDGILYAFQEQ +DD  VML+GFG VVN+LG RVKPYL QI  TIKWRLN KSAKVRQQAADL+SRIA VM +C  EQLMGHLGVVL+EYLGEEYPEVLGSILGALK+IVNVIGMTKMTPPIKDLLPRL PIL NRHEKVQENCI
Sbjct:   45 MVMETIEKVVTNLGSSDIDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNNKSAKVRQQAADLISRIAVVMKQCHEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKSIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCI 215

[Close]

BLAST of mRNA_M-pyrifera_M_contig116369.3396.1 vs. uniprot
Match: A0A835R3I1_VANPL (Uncharacterized protein n=1 Tax=Vanilla planifolia TaxID=51239 RepID=A0A835R3I1_VANPL)

HSP 1 Score: 273 bits (697), Expect = 1.040e-87
Identity = 141/171 (82.46%), Postives = 151/171 (88.30%), Query Frame = 0

Query:    1 MVMEAIERIVSSLGVSDIEPRLEELLIDGILYAFQEQKTDDTKVMLSGFGTVVNALGVRVKPYLNQIVSTIKWRLNLKSAKVRQQAADLVSRIAGVMMKCDAEQLMGHLGVVLFEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLPPILNNRHEKVQENCI 171
            MVME IE++V++LG SDI+ RLEELLIDGI YAFQEQ +DD  VML+GFG VVNALG RVKPYL QI  TIKWRLN KSAKVRQQAADL+SR+A VM  C  EQLMGHLGVVL+EYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRL PIL NRHEKVQENCI
Sbjct:  259 MVMETIEKVVANLGASDIDARLEELLIDGIRYAFQEQTSDDANVMLNGFGAVVNALGQRVKPYLPQICGTIKWRLNNKSAKVRQQAADLISRMAVVMKHCHEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCI 429

[Close]

BLAST of mRNA_M-pyrifera_M_contig116369.3396.1 vs. uniprot
Match: T1MGZ8_TRIUA (TOG domain-containing protein n=1 Tax=Triticum urartu TaxID=4572 RepID=T1MGZ8_TRIUA)

HSP 1 Score: 280 bits (716), Expect = 1.770e-87
Identity = 144/171 (84.21%), Postives = 154/171 (90.06%), Query Frame = 0

Query:    1 MVMEAIERIVSSLGVSDIEPRLEELLIDGILYAFQEQKTDDTKVMLSGFGTVVNALGVRVKPYLNQIVSTIKWRLNLKSAKVRQQAADLVSRIAGVMMKCDAEQLMGHLGVVLFEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLPPILNNRHEKVQENCI 171
            MVME IE++V++LG SDI+PRLEELLIDGILYAFQEQ +DD  VML+GFG VVNALG RVKPYL QI  TIKWRLN KSAKVRQQAADL+SRIA VM +C  EQLMGHLGVVL+EYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRL PIL NRHEKVQENCI
Sbjct:  305 MVMETIEKVVANLGTSDIDPRLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNALGQRVKPYLPQICGTIKWRLNNKSAKVRQQAADLISRIAIVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCI 475

[Close]

BLAST of mRNA_M-pyrifera_M_contig116369.3396.1 vs. uniprot
Match: A0A0D9YM79_9ORYZ (Uncharacterized protein n=2 Tax=Poaceae TaxID=4479 RepID=A0A0D9YM79_9ORYZ)

HSP 1 Score: 277 bits (708), Expect = 2.760e-87
Identity = 143/171 (83.63%), Postives = 153/171 (89.47%), Query Frame = 0

Query:    1 MVMEAIERIVSSLGVSDIEPRLEELLIDGILYAFQEQKTDDTKVMLSGFGTVVNALGVRVKPYLNQIVSTIKWRLNLKSAKVRQQAADLVSRIAGVMMKCDAEQLMGHLGVVLFEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLPPILNNRHEKVQENCI 171
            MVME IE++V++LG SDI+ RLEELLIDGILYAFQEQ +DD  VML+GFG VVNALG RVKPYL QI  TIKWRLN KSAKVRQQAADL+SRIA VM +C  EQLMGHLGVVL+EYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRL PIL NRHEKVQENCI
Sbjct:  170 MVMETIEKVVANLGASDIDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNALGQRVKPYLPQICGTIKWRLNNKSAKVRQQAADLISRIAIVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCI 340

[Close]

BLAST of mRNA_M-pyrifera_M_contig116369.3396.1 vs. uniprot
Match: A0A453NAN5_AEGTS (TOG domain-containing protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453NAN5_AEGTS)

HSP 1 Score: 280 bits (716), Expect = 5.320e-87
Identity = 144/171 (84.21%), Postives = 154/171 (90.06%), Query Frame = 0

Query:    1 MVMEAIERIVSSLGVSDIEPRLEELLIDGILYAFQEQKTDDTKVMLSGFGTVVNALGVRVKPYLNQIVSTIKWRLNLKSAKVRQQAADLVSRIAGVMMKCDAEQLMGHLGVVLFEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLPPILNNRHEKVQENCI 171
            MVME IE++V++LG SDI+PRLEELLIDGILYAFQEQ +DD  VML+GFG VVNALG RVKPYL QI  TIKWRLN KSAKVRQQAADL+SRIA VM +C  EQLMGHLGVVL+EYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRL PIL NRHEKVQENCI
Sbjct:  363 MVMETIEKVVANLGASDIDPRLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNALGQRVKPYLPQICGTIKWRLNNKSAKVRQQAADLISRIAIVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCI 533

[Close]

BLAST of mRNA_M-pyrifera_M_contig116369.3396.1 vs. uniprot
Match: A0A453JIU3_AEGTS (TOG domain-containing protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453JIU3_AEGTS)

HSP 1 Score: 280 bits (716), Expect = 5.420e-87
Identity = 144/171 (84.21%), Postives = 154/171 (90.06%), Query Frame = 0

Query:    1 MVMEAIERIVSSLGVSDIEPRLEELLIDGILYAFQEQKTDDTKVMLSGFGTVVNALGVRVKPYLNQIVSTIKWRLNLKSAKVRQQAADLVSRIAGVMMKCDAEQLMGHLGVVLFEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLPPILNNRHEKVQENCI 171
            MVME IE++V++LG SDI+PRLEELLIDGILYAFQEQ +DD  VML+GFG VVNALG RVKPYL QI  TIKWRLN KSAKVRQQAADL+SRIA VM +C  EQLMGHLGVVL+EYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRL PIL NRHEKVQENCI
Sbjct:  363 MVMETIEKVVANLGTSDIDPRLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNALGQRVKPYLPQICGTIKWRLNNKSAKVRQQAADLISRIAIVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCI 533

[Close]

BLAST of mRNA_M-pyrifera_M_contig116369.3396.1 vs. uniprot
Match: A0A2P5WG13_GOSBA (TOG domain-containing protein n=1 Tax=Gossypium barbadense TaxID=3634 RepID=A0A2P5WG13_GOSBA)

HSP 1 Score: 276 bits (706), Expect = 7.550e-87
Identity = 142/171 (83.04%), Postives = 153/171 (89.47%), Query Frame = 0

Query:    1 MVMEAIERIVSSLGVSDIEPRLEELLIDGILYAFQEQKTDDTKVMLSGFGTVVNALGVRVKPYLNQIVSTIKWRLNLKSAKVRQQAADLVSRIAGVMMKCDAEQLMGHLGVVLFEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLPPILNNRHEKVQENCI 171
            MVME IE++V++LG SDI+ RLEELLIDGILYAFQEQ +DD  VML+GFG VVN+LG RVKPYL QI  TIKWRLN KSAKVRQQAADL+SRIA VM +C  EQLMGHLGVVL+EYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRL PIL NRHEKVQENCI
Sbjct:  133 MVMETIEKVVANLGASDIDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNNKSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCI 303

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig116369.3396.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig116369.3396.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A1J1GFC0_9SPER	7.740e-92	83.04	Splicing factor 3B subunit (Fragment) n=13 Tax=Ket...	[more]
A0A392P898_9FABA	5.490e-90	81.87	Splicing factor 3B subunit 1-like (Fragment) n=1 T...	[more]
A0A835Q468_VANPL	5.390e-88	83.63	TOG domain-containing protein n=5 Tax=Vanilla plan...	[more]
A0A2K3LVV7_TRIPR	8.680e-88	82.46	Splicing factor 3B subunit 1-like protein n=2 Tax=...	[more]
A0A835R3I1_VANPL	1.040e-87	82.46	Uncharacterized protein n=1 Tax=Vanilla planifolia...	[more]
T1MGZ8_TRIUA	1.770e-87	84.21	TOG domain-containing protein n=1 Tax=Triticum ura...	[more]
A0A0D9YM79_9ORYZ	2.760e-87	83.63	Uncharacterized protein n=2 Tax=Poaceae TaxID=4479...	[more]
A0A453NAN5_AEGTS	5.320e-87	84.21	TOG domain-containing protein n=1 Tax=Aegilops tau...	[more]
A0A453JIU3_AEGTS	5.420e-87	84.21	TOG domain-containing protein n=1 Tax=Aegilops tau...	[more]
A0A2P5WG13_GOSBA	7.550e-87	83.04	TOG domain-containing protein n=1 Tax=Gossypium ba...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011989	Armadillo-like helical	GENE3D	1.25.10.10		coord: 1..171 e-value: 4.9E-8 score: 34.1
IPR038737	Splicing factor 3B subunit 1-like	PANTHER	PTHR12097	SPLICING FACTOR 3B, SUBUNIT 1-RELATED	coord: 1..171
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 2..171

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig116369	contig	M-pyrifera_M_contig116369:14..526 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig116369.3396.1	mRNA_M-pyrifera_M_contig116369.3396.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig116369 2..526 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig116369.3396.1 ID=prot_M-pyrifera_M_contig116369.3396.1|Name=mRNA_M-pyrifera_M_contig116369.3396.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=171bp
MVMEAIERIVSSLGVSDIEPRLEELLIDGILYAFQEQKTDDTKVMLSGFG
TVVNALGVRVKPYLNQIVSTIKWRLNLKSAKVRQQAADLVSRIAGVMMKC
DAEQLMGHLGVVLFEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKD
LLPRLPPILNNRHEKVQENCI

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011989	ARM-like
IPR038737	SF3b_su1-like
IPR016024	ARM-type_fold