prot_M-pyrifera_M_contig116350.3388.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig116350.3388.1
Unique Nameprot_M-pyrifera_M_contig116350.3388.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length152
Homology
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BLAST of mRNA_M-pyrifera_M_contig116350.3388.1 vs. uniprot
Match: A0A350PFA3_9BACT (Uncharacterized protein n=4 Tax=Bacteroidetes/Chlorobi group TaxID=68336 RepID=A0A350PFA3_9BACT)

HSP 1 Score: 132 bits (331), Expect = 5.410e-36
Identity = 69/150 (46.00%), Postives = 100/150 (66.67%), Query Frame = 0 
Query:    1 LRIESDPFERIHLYRRSLNKIKQTVQPISKAVCKNLVNEFLDGKRNWFKGINFVDVVPFEPDQTLVEINKIETDEELEEKKRKTIIICIGSFFISIFSAIYMFNNIDNMSEMSFKTFGWVMGGVIGGIVLFIYLIFDYFEIRREIINRRK 150
            +RIE     + HLY   L+KIKQ+VQP+SK +CK LV++FL G +NW KGI F ++ PFEP        K  + EELE+ +RK++++ IGS  IS+ +  YM++  +NM +M  + +   MGG I G+ LF+Y IFD+FEIR E IN++K
Sbjct:   46 IRIEIYGLNKFHLYVEKLHKIKQSVQPVSKNICKKLVSDFLGGNKNWDKGIRFTEIEPFEPKVEKEIPFKKRSLEELEDIERKSLVLLIGSLLISLGAGFYMYSKWNNMIDMDVRIYSLGMGGAIFGLGLFVYTIFDFFEIRDE-INKKK 194
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig116350.3388.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A350PFA3_9BACT5.410e-3646.00Uncharacterized protein n=4 Tax=Bacteroidetes/Chlo... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 105..115
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 85..104
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..84
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 116..139
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 140..151
NoneNo IPR availableTMHMMTMhelixcoord: 117..139
NoneNo IPR availableTMHMMTMhelixcoord: 85..102

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig116350contigM-pyrifera_M_contig116350:21..476 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig116350.3388.1mRNA_M-pyrifera_M_contig116350.3388.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig116350 21..476 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig116350.3388.1 ID=prot_M-pyrifera_M_contig116350.3388.1|Name=mRNA_M-pyrifera_M_contig116350.3388.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=152bp
LRIESDPFERIHLYRRSLNKIKQTVQPISKAVCKNLVNEFLDGKRNWFKG
INFVDVVPFEPDQTLVEINKIETDEELEEKKRKTIIICIGSFFISIFSAI
YMFNNIDNMSEMSFKTFGWVMGGVIGGIVLFIYLIFDYFEIRREIINRRK
R*
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