prot_M-pyrifera_M_contig11635.3387.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig11635.3387.1
Unique Nameprot_M-pyrifera_M_contig11635.3387.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length246
Homology
BLAST of mRNA_M-pyrifera_M_contig11635.3387.1 vs. uniprot
Match: D8LHJ5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHJ5_ECTSI)

HSP 1 Score: 197 bits (501), Expect = 8.260e-58
Identity = 135/224 (60.27%), Postives = 152/224 (67.86%), Query Frame = 0
Query:   44 VFGNAHWLVYLTHWTFALQTVYYFLALGSATHLWANSGRKQRE----EDVSRGGGGRGLSG-------------------RRDRSKG-RKGIGGAVTRSSSVPSXXXXXXXXXXXXXXXXXXXXXXXXXXXGSSXXXXXXXXXSGNH-DLKQWRKLQWGLLFVCADCSIIVTGVYWTFLYNGWSDQLNLQIHLFNSVFMAVNVFIGASPFRWQHIGIPYIYGIL 242
            VFGNAHWL+YLTHWTFALQT+YYFLALGSA HLW NSGRK+R          GGGGR L G                    RDRSK  R+G+G +   +               XXXX XXXXXXXXXXXX       XXXXX+G H  L++WRKLQWGLL VCAD +IIVTGVYWTFLYNGW+DQLNLQIHLFN++FMA NVF+G SPF+W+HIGI YIYG L
Sbjct:    3 VFGNAHWLLYLTHWTFALQTLYYFLALGSAIHLWLNSGRKRRAGWLWSSREIGGGGRELEGVGGGPAIKGRGVGRAGNDSARDRSKEKREGLGRSAAAAVDAGKEGLPLPKPAGXXXXVXXXXXXXXXXXX-------XXXXXNGEHIALERWRKLQWGLLIVCADSAIIVTGVYWTFLYNGWTDQLNLQIHLFNALFMAANVFVGGSPFKWEHIGIAYIYGFL 219          
BLAST of mRNA_M-pyrifera_M_contig11635.3387.1 vs. uniprot
Match: A0A7S2Y4E7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y4E7_9STRA)

HSP 1 Score: 63.5 bits (153), Expect = 2.800e-8
Identity = 53/233 (22.75%), Postives = 81/233 (34.76%), Query Frame = 0
Query:   10 EVFGSSRLLPQKPYVLLRAALALNSLYWLIRSVRVFGNAHWLVYLTHWTFALQTVYYFLALGSATHLWANSGRKQREEDVSRGGGGRGLSGRRDRSKGRKGIGGAVTRSSSVPSXXXXXXXXXXXXXXXXXXXXXXXXXXXGSSXXXXXXXXXSGNHDLKQWRKLQWGLLFVCADCSIIVTGVYWTFLYNGWSDQLNLQIHLFNSVFMAVNVFIGASPFRWQHIGIPYIYGIL 242
            E F SS  L  K Y++ +  L L    W+  S+ + G+  WL+YLTHWTF  + VY+  +   A   ++                                   A +RSS +P                                        S    +     +QW   ++  DC +IVT VYW F+Y G        +H  NS+ M  +  I A P    H  +  +YG++
Sbjct:   19 EKFRSSSWLSPKAYLVYKVILVLFLTPWMPYSMYLDGSVLWLIYLTHWTFTAEWVYFCTSAYQAFRGYSTKSSC------------------------------AESRSSGIPDVETQSASLEK------------------DGNIDLNLPLTSDTPKIGVLEYVQWIAYYITLDCCVIVTIVYWLFVYEGKFGANTFVLHTINSLVMVFDQLIVAMPCGKMHFWVAQVYGVI 203          
BLAST of mRNA_M-pyrifera_M_contig11635.3387.1 vs. uniprot
Match: T1IT61_STRMM (Uncharacterized protein n=1 Tax=Strigamia maritima TaxID=126957 RepID=T1IT61_STRMM)

HSP 1 Score: 53.1 bits (126), Expect = 7.820e-5
Identity = 26/72 (36.11%), Postives = 40/72 (55.56%), Query Frame = 0
Query:  173 KLQWGLLFVCADCSIIVTGVYWTFLYNGWSDQL---NLQIHLFNSVFMAVNVFIGASPFRWQHIGIPYIYGI 241
            K+ W    +    SI++T VYW FLY   +  L   N+QIH  NSV + +++ I + PFR  H   P ++G+
Sbjct:   62 KISWVFTNLSTSTSILITAVYWIFLYPDGTSTLDYGNIQIHAINSVVIVLDLIIISIPFRLFHFYQPLLFGL 133          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig11635.3387.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LHJ5_ECTSI8.260e-5860.27Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2Y4E7_9STRA2.800e-822.75Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
T1IT61_STRMM7.820e-536.11Uncharacterized protein n=1 Tax=Strigamia maritima... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR12242UNCHARACTERIZEDcoord: 17..241
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 229..245
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..20
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 176..197
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 209..228
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 198..208
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 21..39
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 40..58
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 59..78
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 79..175
NoneNo IPR availableTMHMMTMhelixcoord: 55..77
NoneNo IPR availableTMHMMTMhelixcoord: 23..40
NoneNo IPR availableTMHMMTMhelixcoord: 176..198
NoneNo IPR availableTMHMMTMhelixcoord: 208..230

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig11635contigM-pyrifera_M_contig11635:357..4913 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig11635.3387.1mRNA_M-pyrifera_M_contig11635.3387.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig11635 357..4913 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig11635.3387.1 ID=prot_M-pyrifera_M_contig11635.3387.1|Name=mRNA_M-pyrifera_M_contig11635.3387.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=246bp
SLSLRQIRPEVFGSSRLLPQKPYVLLRAALALNSLYWLIRSVRVFGNAHW
LVYLTHWTFALQTVYYFLALGSATHLWANSGRKQREEDVSRGGGGRGLSG
RRDRSKGRKGIGGAVTRSSSVPSSSSLAAASSSDGGCGCGGSSDGGGGGG
GSSDGGCGCGGGSGNHDLKQWRKLQWGLLFVCADCSIIVTGVYWTFLYNG
WSDQLNLQIHLFNSVFMAVNVFIGASPFRWQHIGIPYIYGILCES*
back to top