prot_M-pyrifera_M_contig116218.3368.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig116218.3368.1
Unique Nameprot_M-pyrifera_M_contig116218.3368.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length105
Homology
BLAST of mRNA_M-pyrifera_M_contig116218.3368.1 vs. uniprot
Match: G9MBA2_THET8 (Cas_Cas4 domain-containing protein n=6 Tax=Thermus TaxID=270 RepID=G9MBA2_THET8)

HSP 1 Score: 57.8 bits (138), Expect = 1.020e-7
Identity = 27/53 (50.94%), Postives = 39/53 (73.58%), Query Frame = 0
Query:    4 YKYAGRIDMVARLGTKAYVLDVKTSSMVHPTYSMQLAAYAHAIREMGSLDEDG 56
            ++YAGR+D+VARLG +  V+D+KTS  V+P + +Q+ AYA A+RE G   E G
Sbjct:  154 HRYAGRVDLVARLGGRVVVVDLKTSPRVYPEHLLQVGAYALALREEGLEVEGG 206          
BLAST of mRNA_M-pyrifera_M_contig116218.3368.1 vs. uniprot
Match: UPI001FAA10DA (Dna2/Cas4 domain-containing protein n=1 Tax=Thermus sp. SYSU G00630 TaxID=2908145 RepID=UPI001FAA10DA)

HSP 1 Score: 55.5 bits (132), Expect = 1.310e-7
Identity = 25/53 (47.17%), Postives = 39/53 (73.58%), Query Frame = 0
Query:    4 YKYAGRIDMVARLGTKAYVLDVKTSSMVHPTYSMQLAAYAHAIREMGSLDEDG 56
            ++YAGR+D+VARLG +  V+D+KTS+ V+P + +Q+ AYA A++  G   E G
Sbjct:   28 HRYAGRVDLVARLGGRLVVVDLKTSAQVYPEHLLQVGAYALALQAEGIAVEGG 80          
BLAST of mRNA_M-pyrifera_M_contig116218.3368.1 vs. uniprot
Match: H9ZV63_THETH (Cas_Cas4 domain-containing protein n=1 Tax=Thermus thermophilus JL-18 TaxID=798128 RepID=H9ZV63_THETH)

HSP 1 Score: 55.1 bits (131), Expect = 9.700e-7
Identity = 24/47 (51.06%), Postives = 37/47 (78.72%), Query Frame = 0
Query:    4 YKYAGRIDMVARLGTKAYVLDVKTSSMVHPTYSMQLAAYAHAIREMG 50
            ++YAGR+D+VARLG +  V+D+KTS+ V+P + +Q+ AYA A+R  G
Sbjct:  154 HRYAGRVDLVARLGGRPVVVDLKTSARVYPEHLLQVGAYALALRAEG 200          
BLAST of mRNA_M-pyrifera_M_contig116218.3368.1 vs. uniprot
Match: UPI001FA9D166 (PD-(D/E)XK nuclease family protein n=1 Tax=Thermus sp. SYSU G00630 TaxID=2908145 RepID=UPI001FA9D166)

HSP 1 Score: 54.7 bits (130), Expect = 1.380e-6
Identity = 25/53 (47.17%), Postives = 37/53 (69.81%), Query Frame = 0
Query:    4 YKYAGRIDMVARLGTKAYVLDVKTSSMVHPTYSMQLAAYAHAIREMGSLDEDG 56
            ++YAGR+D+VARLG +  V+D+KTS   +P + +Q+ AYA A+R  G   E G
Sbjct:  155 HRYAGRVDLVARLGGRVVVVDLKTSPRAYPEHLLQVGAYALALRAEGVAVEGG 207          
BLAST of mRNA_M-pyrifera_M_contig116218.3368.1 vs. uniprot
Match: A0A430SFE2_THESC (PDDEXK_1 domain-containing protein n=4 Tax=Thermus TaxID=270 RepID=A0A430SFE2_THESC)

HSP 1 Score: 53.1 bits (126), Expect = 5.020e-6
Identity = 38/90 (42.22%), Postives = 50/90 (55.56%), Query Frame = 0
Query:    6 YAGRIDMVARLGTKAYVLDVKTSSMVHPTYSMQLAAYAHAIREMGSLDEDGKEPIEAVDALVLHLDRRTGVATEYHVGDMELAFNGFKSA 95
            YAGR+D+VA LG +  VLD+KTS   +P + +Q+ AYA A+RE G L  DG         LVL L     VA E  + +   AF G + A
Sbjct:  157 YAGRVDLVAFLGGRVVVLDLKTSPRAYPEHLLQVGAYALALREEG-LPVDG--------GLVLALREGLSVA-EVPLDEAAEAFLGLRRA 236          
BLAST of mRNA_M-pyrifera_M_contig116218.3368.1 vs. uniprot
Match: A0A7R7YI58_THETH (Cas_Cas4 domain-containing protein n=1 Tax=Thermus thermophilus TaxID=274 RepID=A0A7R7YI58_THETH)

HSP 1 Score: 52.8 bits (125), Expect = 6.730e-6
Identity = 25/51 (49.02%), Postives = 35/51 (68.63%), Query Frame = 0
Query:    6 YAGRIDMVARLGTKAYVLDVKTSSMVHPTYSMQLAAYAHAIREMGSLDEDG 56
            YAGR+D+VA LG + YV+D+KTSS  +P + +Q+  YA A+ E G   E G
Sbjct:  156 YAGRVDLVATLGGRLYVVDLKTSSRAYPEHLLQVGGYALALWEEGVRVEGG 206          
BLAST of mRNA_M-pyrifera_M_contig116218.3368.1 vs. uniprot
Match: G8NE48_9DEIN (Uncharacterized protein n=1 Tax=Thermus sp. CCB_US3_UF1 TaxID=1111069 RepID=G8NE48_9DEIN)

HSP 1 Score: 51.6 bits (122), Expect = 1.820e-5
Identity = 28/64 (43.75%), Postives = 38/64 (59.38%), Query Frame = 0
Query:    6 YAGRIDMVARLGTKAYVLDVKTSSMVHPTYSMQLAAYAHAIREMGSLDE--------DGKEPIE 61
            YAGR D+VARLG K +V+D+KTS   +P + +Q+ AYA A+   G   E        DG  P+E
Sbjct:  157 YAGRTDLVARLGGKLWVVDLKTSPRAYPEHFLQVGAYALALEGEGLRVEGGLVLCLGDGASPVE 220          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig116218.3368.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
G9MBA2_THET81.020e-750.94Cas_Cas4 domain-containing protein n=6 Tax=Thermus... [more]
UPI001FAA10DA1.310e-747.17Dna2/Cas4 domain-containing protein n=1 Tax=Thermu... [more]
H9ZV63_THETH9.700e-751.06Cas_Cas4 domain-containing protein n=1 Tax=Thermus... [more]
UPI001FA9D1661.380e-647.17PD-(D/E)XK nuclease family protein n=1 Tax=Thermus... [more]
A0A430SFE2_THESC5.020e-642.22PDDEXK_1 domain-containing protein n=4 Tax=Thermus... [more]
A0A7R7YI58_THETH6.730e-649.02Cas_Cas4 domain-containing protein n=1 Tax=Thermus... [more]
G8NE48_9DEIN1.820e-543.75Uncharacterized protein n=1 Tax=Thermus sp. CCB_US... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038726PD-(D/E)XK endonuclease-like domain, AddAB-typePFAMPF12705PDDEXK_1coord: 7..84
e-value: 5.5E-6
score: 26.5
IPR011335Restriction endonuclease type II-likeSUPERFAMILY52980Restriction endonuclease-likecoord: 6..51

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig116218contigM-pyrifera_M_contig116218:6..320 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig116218.3368.1mRNA_M-pyrifera_M_contig116218.3368.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig116218 6..320 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig116218.3368.1 ID=prot_M-pyrifera_M_contig116218.3368.1|Name=mRNA_M-pyrifera_M_contig116218.3368.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=105bp
SHRYKYAGRIDMVARLGTKAYVLDVKTSSMVHPTYSMQLAAYAHAIREMG
SLDEDGKEPIEAVDALVLHLDRRTGVATEYHVGDMELAFNGFKSALFLWR
ILQNK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038726PDDEXK_AddAB-type
IPR011335Restrct_endonuc-II-like