prot_M-pyrifera_M_contig116026.3331.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig116026.3331.1
Unique Nameprot_M-pyrifera_M_contig116026.3331.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length123
Homology
BLAST of mRNA_M-pyrifera_M_contig116026.3331.1 vs. uniprot
Match: F4PMM2_CAVFA (Leucine-rich repeat-containing protein n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4PMM2_CAVFA)

HSP 1 Score: 70.9 bits (172), Expect = 8.330e-12
Identity = 32/86 (37.21%), Postives = 45/86 (52.33%), Query Frame = 0
Query:    4 VRVLTELYESTGGRSWTTNERWLHGEPCENRWEGVYCNEV-GEVEIVSLTNGGLVGELPSSLASLRSLRFLWLSLNRINGTIPPAL 88
               L +LY+   G  W  ++ WL G+PC N W G+ CNE  G++  + L    L G L S +A L  L  L +  N +NG IPP +
Sbjct:  172 ANALVQLYDLWSGDQWYNSDNWLVGDPCNNMWYGITCNETTGDIIALDLAENNLFGRLTSDIADLTELVHLNIQNNNLNGDIPPTV 257          
BLAST of mRNA_M-pyrifera_M_contig116026.3331.1 vs. uniprot
Match: A0A833GMT5_9GAMM (Uncharacterized protein n=1 Tax=Dokdonella sp. TaxID=2291710 RepID=A0A833GMT5_9GAMM)

HSP 1 Score: 64.3 bits (155), Expect = 8.200e-10
Identity = 29/72 (40.28%), Postives = 44/72 (61.11%), Query Frame = 0
Query:    5 RVLTELYESTGGRSWTTNERWLHGEPCENRWEGVYCNEVGE-VEIVSLTNGGLVGELPSSLASLRSLRFLWL 75
            + L  LY ST G +W +N+ WL G+PC+N W G+ C++ G+ V  + L N GL G +P+    L +L  LW+
Sbjct:   58 QTLVNLYNSTNGANWVSNDNWLTGDPCDNGWYGIGCDDAGQHVREIDLPNNGLSGLVPN----LSALGNLWV 125          
BLAST of mRNA_M-pyrifera_M_contig116026.3331.1 vs. uniprot
Match: UPI00098654F5 (hypothetical protein n=1 Tax=Marinicella sediminis TaxID=1792834 RepID=UPI00098654F5)

HSP 1 Score: 64.7 bits (156), Expect = 1.160e-9
Identity = 28/66 (42.42%), Postives = 39/66 (59.09%), Query Frame = 0
Query:    6 VLTELYESTGGRSWTTNERWLHGEPCENRWEGVYCNEVGEVEIVSLTNGGLVGELPSSLASLRSLR 71
             L ELY+ T G  W  N  WL G+PCEN W GV CN+   +  +SL++  L G +P S+ +L  L+
Sbjct:   30 ALLELYQQTQGDDWLENSNWLSGDPCENNWFGVLCND-DLIRELSLSDNNLTGHIPDSIGALTDLQ 94          
BLAST of mRNA_M-pyrifera_M_contig116026.3331.1 vs. uniprot
Match: UPI0019B1AE20 (Uncharacterized protein n=2 Tax=Marinicella pacifica TaxID=1171543 RepID=UPI0019B1AE20)

HSP 1 Score: 62.8 bits (151), Expect = 5.660e-9
Identity = 31/73 (42.47%), Postives = 42/73 (57.53%), Query Frame = 0
Query:    6 VLTELYESTGGRSWTTNERWLHGEPCENRWEGVYCNEVGEVEIVSLTNGGLVGELPSSLASLRSLRFLWLSLN 78
             L  LY ST G +WT N  WL G+PC+N W GV C E   V  + L    LVG +P+ +  L +L +L L++N
Sbjct:   37 ALVALYNSTNGVNWTDNTNWLVGDPCDNNWIGVSC-ENNSVTKLLLQQKNLVGYIPNEIGDLTNLTWLNLTVN 108          
BLAST of mRNA_M-pyrifera_M_contig116026.3331.1 vs. uniprot
Match: S0FES7_9BACT (Leucine Rich Repeat protein n=1 Tax=Phocaeicola coprophilus DSM 18228 = JCM 13818 TaxID=547042 RepID=S0FES7_9BACT)

HSP 1 Score: 62.0 bits (149), Expect = 1.040e-8
Identity = 32/86 (37.21%), Postives = 51/86 (59.30%), Query Frame = 0
Query:    5 RVLTELYESTGGRSWTTNERWLHGEPCENRWEGVYCNEVGEVEIVSLTNGGLVGELPSSLASLRSLRFLWLSLNRINGTIPPALCA 90
            + L +LY +T G +W  +E W   +P    W GV   + G V  +SL+  GL G LP+SLA+L +L ++ L+ NR++G +P  + A
Sbjct:  295 QALIDLYNATDGDNWINHENWCSDKPLYE-WYGVEYWD-GRVRSLSLSENGLTGNLPASLANLENLNYMNLTGNRLSGNVPDEILA 378          
BLAST of mRNA_M-pyrifera_M_contig116026.3331.1 vs. uniprot
Match: UPI000826DEA0 (T9SS type A sorting domain-containing protein n=1 Tax=Formosa haliotis TaxID=1555194 RepID=UPI000826DEA0)

HSP 1 Score: 58.9 bits (141), Expect = 1.220e-7
Identity = 31/80 (38.75%), Postives = 47/80 (58.75%), Query Frame = 0
Query:    5 RVLTELYESTGGRSWTTNERWLHGEPCENRWEGVYCNEVGEVEIVSLTNGGLVGELPSSLASLRSLRFLWLSLNRINGTI 84
            +VL +LY +TGG SW+ N+ WL  EP +  W GV   +   +  ++L    L G LP SL +L  L+ L L+ N ++GT+
Sbjct:   42 QVLIDLYNATGGDSWSYNKNWLSDEPVDT-WSGVTVED-DHIVSINLYQRNLTGTLPESLKTLSYLKILDLTGNNLSGTL 119          
BLAST of mRNA_M-pyrifera_M_contig116026.3331.1 vs. uniprot
Match: A0A7J6HCC0_CANSA (Protein kinase domain-containing protein n=2 Tax=Cannabis sativa TaxID=3483 RepID=A0A7J6HCC0_CANSA)

HSP 1 Score: 58.2 bits (139), Expect = 2.300e-7
Identity = 29/65 (44.62%), Postives = 39/65 (60.00%), Query Frame = 0
Query:   17 RSWTTNERWLHGEPCENRWEGVYCNEVGEVEIVSLTNGGLVGELPSSLASLRSLRFLWLSLNRIN 81
            +SWT      H +PC   +EGV CN+ G V  +SL   GL GE+P ++A LRSL  L+L  N +N
Sbjct:   40 KSWTP-----HSDPCSGAFEGVACNDQGRVANISLQGKGLWGEIPGTVAELRSLTGLYLHFNSLN 99          
BLAST of mRNA_M-pyrifera_M_contig116026.3331.1 vs. uniprot
Match: A0A803NX80_CANSA (Protein kinase domain-containing protein n=1 Tax=Cannabis sativa TaxID=3483 RepID=A0A803NX80_CANSA)

HSP 1 Score: 58.2 bits (139), Expect = 2.350e-7
Identity = 29/65 (44.62%), Postives = 39/65 (60.00%), Query Frame = 0
Query:   17 RSWTTNERWLHGEPCENRWEGVYCNEVGEVEIVSLTNGGLVGELPSSLASLRSLRFLWLSLNRIN 81
            +SWT      H +PC   +EGV CN+ G V  +SL   GL GE+P ++A LRSL  L+L  N +N
Sbjct:   15 KSWTP-----HSDPCSGAFEGVACNDQGRVANISLQGKGLWGEIPGTVAELRSLTGLYLHFNSLN 74          
BLAST of mRNA_M-pyrifera_M_contig116026.3331.1 vs. uniprot
Match: A0A6A1UK17_9ROSI (Protein disulfide-isomerase SCO2 n=1 Tax=Morella rubra TaxID=262757 RepID=A0A6A1UK17_9ROSI)

HSP 1 Score: 57.8 bits (138), Expect = 3.150e-7
Identity = 32/63 (50.79%), Postives = 38/63 (60.32%), Query Frame = 0
Query:   28 GEPC---ENRWEGVYCNE--VGEVEIVSLTNGGLVGELPSSLASLRSLRFLWLSLNRINGTIP 85
            G+PC   EN W GV C++     V  V LTN GL G LPSS+A L  L  LWL  N ++GTIP
Sbjct:  365 GDPCLPTENSWTGVTCSKGKFSRVVSVHLTNIGLSGSLPSSIAKLTGLTHLWLGGNNLSGTIP 427          
BLAST of mRNA_M-pyrifera_M_contig116026.3331.1 vs. uniprot
Match: A0A7X9RX36_9BACT (T9SS type A sorting domain-containing protein n=1 Tax=Flammeovirga aprica JL-4 TaxID=694437 RepID=A0A7X9RX36_9BACT)

HSP 1 Score: 57.4 bits (137), Expect = 4.570e-7
Identity = 40/117 (34.19%), Postives = 59/117 (50.43%), Query Frame = 0
Query:    6 VLTELYESTGGRSWTTNERWLHGEPCENRWEGVYCNEVGEVEIVSLTNGGLVGELPSSLASLRSLRFLWLSLNRINGTIPPALCAHAALEELSLAYNDLHTSTACLSRMSAMRALDL 122
             L ++Y   GG  W     W+      + W GV   +  +V  ++L+N GL G +P S+A L+ +  L LS+N I+G   P +     LEELSL  N +      L+RMSA+  L L
Sbjct:  138 ALVDIYNKLGGDFWKNTNNWMTDADV-SEWYGVSVID-RKVVAINLSNNGLWGTIPPSIAHLQYITSLDLSVNGISGMDAPEM-EMPLLEELSLHRNYIQALPDSLNRMSALSTLRL 251          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig116026.3331.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
F4PMM2_CAVFA8.330e-1237.21Leucine-rich repeat-containing protein n=1 Tax=Cav... [more]
A0A833GMT5_9GAMM8.200e-1040.28Uncharacterized protein n=1 Tax=Dokdonella sp. Tax... [more]
UPI00098654F51.160e-942.42hypothetical protein n=1 Tax=Marinicella sediminis... [more]
UPI0019B1AE205.660e-942.47Uncharacterized protein n=2 Tax=Marinicella pacifi... [more]
S0FES7_9BACT1.040e-837.21Leucine Rich Repeat protein n=1 Tax=Phocaeicola co... [more]
UPI000826DEA01.220e-738.75T9SS type A sorting domain-containing protein n=1 ... [more]
A0A7J6HCC0_CANSA2.300e-744.62Protein kinase domain-containing protein n=2 Tax=C... [more]
A0A803NX80_CANSA2.350e-744.62Protein kinase domain-containing protein n=1 Tax=C... [more]
A0A6A1UK17_9ROSI3.150e-750.79Protein disulfide-isomerase SCO2 n=1 Tax=Morella r... [more]
A0A7X9RX36_9BACT4.570e-734.19T9SS type A sorting domain-containing protein n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 4..123
e-value: 3.7E-22
score: 80.5
NoneNo IPR availablePANTHERPTHR27008:SF356coord: 18..122
NoneNo IPR availablePANTHERPTHR27008FAMILY NOT NAMEDcoord: 18..122
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 20..122

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig116026contigM-pyrifera_M_contig116026:73..441 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig116026.3331.1mRNA_M-pyrifera_M_contig116026.3331.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig116026 73..441 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig116026.3331.1 ID=prot_M-pyrifera_M_contig116026.3331.1|Name=mRNA_M-pyrifera_M_contig116026.3331.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=123bp
RLNVRVLTELYESTGGRSWTTNERWLHGEPCENRWEGVYCNEVGEVEIVS
LTNGGLVGELPSSLASLRSLRFLWLSLNRINGTIPPALCAHAALEELSLA
YNDLHTSTACLSRMSAMRALDLE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf