prot_M-pyrifera_M_contig11597.3312.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig11597.3312.1
Unique Nameprot_M-pyrifera_M_contig11597.3312.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length200
Homology
BLAST of mRNA_M-pyrifera_M_contig11597.3312.1 vs. uniprot
Match: A0A6H5JPH2_9PHAE (PseudoU_synth_2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JPH2_9PHAE)

HSP 1 Score: 347 bits (889), Expect = 4.780e-116
Identity = 163/195 (83.59%), Postives = 178/195 (91.28%), Query Frame = 0
Query:    5 IKVHGGTGEDDPGPGGRRSVRQSLPYMLAPTKSQDRPLHRPLHCHRLDKPTGGLLVCAKTRPALTAICEAFKNRLISKRYVALVAGELEGSGAIVTPLSGKACETNYRVRGEPVRSLKTPVITTVDLWPVTGRFHQLRRHLASIGCPILGDERYTPEGSPFQDGGMFLTAVGLTLSHPITGEELNFSLPEPAKYE 199
            + VHGGTGEDDPGPGGRRSVRQ+LPYML PTKS+DRPLHRPLHCHRLDK TGGLL+CAKTRPAL+AI +AF+ RL+SKRYVALVAGELEGSGAIVTPL GKAC TNYRVRG PVRSLKT VITTVDLWPVTGR HQLRRHL+SIGCPILGD RYTP+  PFQ+GGM+L AVGLT  HPIT EE+NFS+PEPAK+E
Sbjct:  179 VAVHGGTGEDDPGPGGRRSVRQALPYMLTPTKSKDRPLHRPLHCHRLDKATGGLLICAKTRPALSAIGDAFEQRLVSKRYVALVAGELEGSGAIVTPLDGKACVTNYRVRGPPVRSLKTSVITTVDLWPVTGRLHQLRRHLSSIGCPILGDRRYTPDEVPFQEGGMYLQAVGLTFPHPITREEMNFSIPEPAKFE 373          
BLAST of mRNA_M-pyrifera_M_contig11597.3312.1 vs. uniprot
Match: A0A836CLS8_9STRA (Pseudouridine synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLS8_9STRA)

HSP 1 Score: 191 bits (485), Expect = 4.250e-56
Identity = 100/180 (55.56%), Postives = 121/180 (67.22%), Query Frame = 0
Query:   23 SVRQSLPYMLAPTKSQDRPLHRPLHCHRLDKPTGGLLVCAKTRPALTAICEAFKNRLISKRYVALVAGELEGSGAIVTPLSGKACETNYRVRGE-PVRSLKTPVITTVDLWPVTGRFHQLRRHLASIGCPILGDERYTPEGSP---FQDGGMFLTAVGLTLSHPITGEELNFSLPEPAKY 198
            S+R ++ + L P+ + D  L RP H HRLD PTGGL+VCAKTRPAL  +  AF+ R + KRY ALV G LEGSG I TPLSGK  ET Y V  E  V+SL +  ITTVDLWP TGR HQLR+HLAS+  PILGD+RY P        +  G+FL A+ L   HPITGE LN ++ EP K+
Sbjct:  151 SLRTAIAHCLKPSAATDAVLRRPQHAHRLDGPTGGLMVCAKTRPALQNLSIAFQERRVHKRYRALVTGHLEGSGTISTPLSGKPSETEYSVLDELRVQSLFSGTITTVDLWPKTGRHHQLRKHLASLNVPILGDKRYHPADQAETLLRGEGLFLWALELKFDHPITGEALNLTIEEPEKF 330          
BLAST of mRNA_M-pyrifera_M_contig11597.3312.1 vs. uniprot
Match: A0A7S2RLL2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RLL2_9STRA)

HSP 1 Score: 155 bits (391), Expect = 5.110e-43
Identity = 87/197 (44.16%), Postives = 115/197 (58.38%), Query Frame = 0
Query:    5 IKVHGGTGEDDPGPGGR--RSVRQSLPYMLAPTKSQDRPLHRPLHCHRLDKPTGGLLVCAKTRPALTAICEAFKNRLISKRYVALVAGELEGSGAIVTPLSGKACETNYRVRGEPVRSLKTPVITTVDLWPVTGRFHQLRRHLASIGCPILGDERYTPEGSPFQDG-GMFLTAVGLTLSHPITGEELNFSLPEPAKY 198
            +  HG  G +D G       S++ ++ Y L PT S D PL RP HCHRLD  T GL++ AKTRPAL  +   F  R I K+Y A+V G+L G G I  P+ G A  T++      VRSL+   +T V+L P+TGR HQLR+HLA +G PI+GD RY  +      G GM L AV L  +HPI+G+     + EP K+
Sbjct:   57 MPTHGNRGGEDAGATASLGASLKTAILYSLQPTPSTDEPLRRPEHCHRLDAATFGLVLVAKTRPALRRLTADFAERRIRKQYRAVVHGKLIGEGVIEEPVDGTAAVTHWE-SARTVRSLRWGWLTQVELRPLTGRRHQLRKHLAFLGHPIVGDARYAKDPEQLHRGIGMLLAAVALDFTHPISGKPQQIEVSEPPKF 252          
BLAST of mRNA_M-pyrifera_M_contig11597.3312.1 vs. uniprot
Match: A0A7S4C3Z6_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4C3Z6_CHRCT)

HSP 1 Score: 155 bits (393), Expect = 1.150e-42
Identity = 87/185 (47.03%), Postives = 122/185 (65.95%), Query Frame = 0
Query:   20 GRRSVRQSLPYMLAPTKSQDRPLHRPLHCHRLDKPTGGLLVCAKTRPALTAICEAFKNRLISKRYVALVAGEL---EGSG--AIVTPLSGKACETNYRVRGEPVRSLKTPVITTVDLWPVTGRFHQLRRHLASIGCPILGDERYTPEGSP-FQDGGMFLTAVGLTLSHPITGEELNFSLPEPAKY 198
            GR +VR  L Y L P+++ + PL RP H HRLD PT GLLV AK+RPA++A+ EAF  R + K Y A+VAG++   EG+    + TP+SG++  T +RV      S     ++ V+L P TGR HQLRRH+AS+G PI+GD++Y P   P   + G+ L+AVGL L HP+TG+ L+ S+ EPA +
Sbjct:  165 GRLNVRTMLAYSLQPSQNAE-PLWRPQHVHRLDAPTSGLLVVAKSRPAISALHEAFAQRQVRKTYRAVVAGQIAPHEGTDLRVVETPVSGQSARTEWRVVRR-FASASYGELSLVELHPHTGRTHQLRRHMASLGHPIVGDDKYWPRHMPEHTEHGLCLSAVGLALPHPLTGKVLSLSVDEPASF 347          
BLAST of mRNA_M-pyrifera_M_contig11597.3312.1 vs. uniprot
Match: A0A7S3UCU8_9CHLO (Hypothetical protein n=1 Tax=Picocystis salinarum TaxID=88271 RepID=A0A7S3UCU8_9CHLO)

HSP 1 Score: 152 bits (385), Expect = 4.910e-42
Identity = 82/181 (45.30%), Postives = 106/181 (58.56%), Query Frame = 0
Query:   20 GRRSVRQSLPYMLAPTKSQDRPLHRPLHCHRLDKPTGGLLVCAKTRPALTAICEAFKNRLISKRYVALVAGELEGSGAIVTPLSGKACETNYRVRGEPVRSLKTPVITTVDLWPVTGRFHQLRRHLASIGCPILGDERYTPEGSPFQDGGMFLTAVGLTLSHPITGEELNF-SLPEPAKYE 199
            G+ +++Q LPY+L P   Q   LHRP H HRLD PTGGLL+ AKT+ ++  +   F  R + KRY A+V G LEG G I  PL G+  +T YR   +          T VD+WP TGR+HQ+RRHLASIG PI+GD+ Y P        G+FL A  +   HPITG  +   S P P  +E
Sbjct:  123 GKTTLQQLLPYLLQPAHVQGA-LHRPHHVHRLDMPTGGLLIAAKTQASIREMGILFHERQVQKRYRAVVIGCLEGEGTIDRPLRGQEAQTTYRAVKQQRVGNGHGWRTIVDVWPATGRYHQIRRHLASIGHPIVGDDEYCPRQRHDSSNGLFLWAAEVVFPHPITGRTVALVSEPPPCFHE 302          
BLAST of mRNA_M-pyrifera_M_contig11597.3312.1 vs. uniprot
Match: A0A256WPT6_9BACT (RNA pseudouridine synthase n=1 Tax=Bacteroidetes bacterium 4572_77 TaxID=1972459 RepID=A0A256WPT6_9BACT)

HSP 1 Score: 149 bits (376), Expect = 6.930e-41
Identity = 82/179 (45.81%), Postives = 109/179 (60.89%), Query Frame = 0
Query:   22 RSVRQSLPYMLAPTKSQDRPLHRPLHCHRLDKPTGGLLVCAKTRPALTAICEAFKNRLISKRYVALVAGELEGSGAIVTPLSGKACETNY-RVRGEPVRSLKTPVITTVDLWPVTGRFHQLRRHLASIGCPILGDERYTPEGSPFQDGGMFLTAVGLTLSHPITGEELNFSLPEPAKYE 199
            +++  +LP+ L  +   D  L  P   HRLD PT GLL+  KT+ A+ A+ + FKN+ I K Y A+V GE+  SG I TP+ GK C T+Y + +G+ + S K   +  + L P TGR HQLR HL+SIG PILGD++Y  EG      G+FL A  LT SHP T E L FSLP   K+E
Sbjct:  105 KTIEHALPHNLQKSNLPDA-LEWPQPAHRLDFPTSGLLLVGKTQKAIMALNKCFKNKEIQKTYRAIVIGEIPSSGQINTPIEGKECFTSYQKEKGKSINSPKFGELHLITLSPTTGRKHQLRIHLSSIGNPILGDDKYGKEGLILSKKGLFLQASSLTFSHPFTQEALFFSLPLARKFE 282          
BLAST of mRNA_M-pyrifera_M_contig11597.3312.1 vs. uniprot
Match: A0A3M1YYZ1_9BACT (RluA family pseudouridine synthase (Fragment) n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A3M1YYZ1_9BACT)

HSP 1 Score: 146 bits (369), Expect = 5.690e-40
Identity = 80/177 (45.20%), Postives = 108/177 (61.02%), Query Frame = 0
Query:   22 RSVRQSLPYMLAPTKSQDRPLHRPLHCHRLDKPTGGLLVCAKTRPALTAICEAFKNRLISKRYVALVAGELEGSGAIVTPLSGKACETNYRVRGEPVRSLKTPVITTVDLWPVTGRFHQLRRHLASIGCPILGDERYTPEGSPFQDGGMFLTAVGLTLSHPITGEELNFSLPEPAKY 198
            R+++ +LP  L P+   D  L + L  HRLD PT GLL+ AKT  A   + +AF+N+ + KRY A+  GE+  SG + +P+ GK   T +  R   VRSLK   ++TVDL+P TGR HQLR HLA  G PILGD+ Y PEG   +  G+FL AV L   HP +GE L  ++  P K+
Sbjct:  106 RTLQNALPAHLTPSTRPDA-LKKMLPVHRLDAPTCGLLLVAKTISARINLGQAFENQTVKKRYRAVTIGEMPASGVLDSPIDGKPARTRFE-RVSAVRSLKNGWLSTVDLFPETGRTHQLRIHLAQAGYPILGDKLYGPEGLILKGKGLFLCAVELAFLHPFSGEMLRLAIAPPPKF 280          
BLAST of mRNA_M-pyrifera_M_contig11597.3312.1 vs. uniprot
Match: A0A7S4BPC4_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BPC4_CHRCT)

HSP 1 Score: 148 bits (373), Expect = 1.610e-39
Identity = 89/188 (47.34%), Postives = 113/188 (60.11%), Query Frame = 0
Query:   17 GPGGRRSVRQSLPYMLAPTKS-QDRPLHRPLHCHRLDKPTGGLLVCAKTRPALTAICEAFKNRLISKRYVALVAGELEG-SGAIVTPLSGKACETNYRVRGEPVRSLKTPVITTVDLWPVTGRFHQLRRHLAS-IGCPILGDERYTPEGSPFQDGGMFLTAVGLTLSHPI---TGEELNFSLPEPAKY 198
            G  GR+S+R ++ Y +AP  S     L+RP   HRLDK T GLL+CAKT+PAL ++  AF  R +SKRYVA+V G +EG SG I  PL GK   T + V     RSL+   +TT+ L+P TGR HQLRRH A  +  PILGD +Y   G      GMFL AV LT  HP    T   L+  +P P+K+
Sbjct:  185 GAAGRQSMRTAVQYAVAPPASGTPGALYRPHLVHRLDKGTSGLLLCAKTKPALVSLSSAFAQRRVSKRYVAVVVGYVEGESGKIDAPLDGKEAVTRWEVAARH-RSLRLGHLTTLHLYPTTGRTHQLRRHCAEELNSPILGDSKY---GGECVGSGMFLAAVSLTFQHPARPETDPPLSVEIPWPSKF 368          
BLAST of mRNA_M-pyrifera_M_contig11597.3312.1 vs. uniprot
Match: A0A2N1RPP9_9SPIR (RNA pseudouridine synthase n=1 Tax=Spirochaetae bacterium HGW-Spirochaetae-5 TaxID=2013837 RepID=A0A2N1RPP9_9SPIR)

HSP 1 Score: 145 bits (367), Expect = 2.150e-39
Identity = 78/177 (44.07%), Postives = 109/177 (61.58%), Query Frame = 0
Query:   22 RSVRQSLPYMLAPTKSQDRPLHRPLHCHRLDKPTGGLLVCAKTRPALTAICEAFKNRLISKRYVALVAGELEGSGAIVTPLSGKACETNYRVRGEPVRSLKTPVITTVDLWPVTGRFHQLRRHLASIGCPILGDERYTPEGSPFQDGGMFLTAVGLTLSHPITGEELNFSLPEPAKY 198
            ++V  +LP+ L  +   D  L RP   HRLD  T GLL+ AKTR A   +   F++R I KRY A+V GE+   G I++ + G++ ET+Y +  + V+S+K   +T VDL+P TGR HQLRRH+A  G PI+GD+ Y   G  F+  G+FL AV LTL HP  G  LN  + +P K+
Sbjct:  116 KTVENALPFNLKKSMEDDA-LGRPGPVHRLDSQTSGLLLIAKTRRARINLGHQFESRKIKKRYRAVVKGEIRNPGRIISDIDGRSSETDY-IPVKSVQSIKNGYVTLVDLFPGTGRTHQLRRHMAESGHPIIGDKLYGEPGDLFRGKGLFLAAVELTLDHPCDGVYLNLRIDDPEKF 290          
BLAST of mRNA_M-pyrifera_M_contig11597.3312.1 vs. uniprot
Match: A0A2N2JN50_9DELT (RNA pseudouridine synthase n=1 Tax=Deltaproteobacteria bacterium HGW-Deltaproteobacteria-14 TaxID=2013741 RepID=A0A2N2JN50_9DELT)

HSP 1 Score: 144 bits (364), Expect = 8.330e-39
Identity = 81/179 (45.25%), Postives = 103/179 (57.54%), Query Frame = 0
Query:   22 RSVRQSLPYMLAPTKSQDRPLHRPLHCHRLDKPTGGLLVCAKTRPALTAICEAFKNRLISKRYVALVAGELEGSGAIVTPLSGKACETNYRV--RGEPVRSLKTPVITTVDLWPVTGRFHQLRRHLASIGCPILGDERYTPEGSPFQDGGMFLTAVGLTLSHPITGEELNFSLPEPAKY 198
            R++R +L   LA +   D  L  P   HRLD  T GL+   KT  AL A+  AF +R ++KRY A+V G LEG GAI  PL G+ CET Y     G  VR      +T VDLWP+TGR HQLRRHLA +G  ++GD  Y   G+  +  G+FL AV LTL HP  G  +   +P P K+
Sbjct:  130 RTLRHALSANLAASPRPDA-LRLPEPAHRLDAATSGLVAIGKTASALAALNAAFASRDVAKRYRAVVVGRLEGEGAITVPLGGRPCETRYAAVQHGAAVRC---GWLTVVDLWPLTGRTHQLRRHLAGLGHAVVGDRLYGTRGTILRGLGLFLAAVELTLPHPDDGRPVQVEIPPPRKH 304          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig11597.3312.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JPH2_9PHAE4.780e-11683.59PseudoU_synth_2 domain-containing protein n=2 Tax=... [more]
A0A836CLS8_9STRA4.250e-5655.56Pseudouridine synthase n=1 Tax=Tribonema minus Tax... [more]
A0A7S2RLL2_9STRA5.110e-4344.16Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S4C3Z6_CHRCT1.150e-4247.03Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A7S3UCU8_9CHLO4.910e-4245.30Hypothetical protein n=1 Tax=Picocystis salinarum ... [more]
A0A256WPT6_9BACT6.930e-4145.81RNA pseudouridine synthase n=1 Tax=Bacteroidetes b... [more]
A0A3M1YYZ1_9BACT5.690e-4045.20RluA family pseudouridine synthase (Fragment) n=1 ... [more]
A0A7S4BPC4_CHRCT1.610e-3947.34Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A2N1RPP9_9SPIR2.150e-3944.07RNA pseudouridine synthase n=1 Tax=Spirochaetae ba... [more]
A0A2N2JN50_9DELT8.330e-3945.25RNA pseudouridine synthase n=1 Tax=Deltaproteobact... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.2350.10coord: 4..194
e-value: 4.5E-38
score: 132.9
NoneNo IPR availablePANTHERPTHR21600RIBOSOMAL LARGE SUBUNIT PSEUDOURIDINE SYNTHASE Bcoord: 27..195
IPR006145Pseudouridine synthase, RsuA/RluAPFAMPF00849PseudoU_synth_2coord: 44..147
e-value: 3.0E-18
score: 66.4
IPR020103Pseudouridine synthase, catalytic domain superfamilySUPERFAMILY55120Pseudouridine synthasecoord: 25..197

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig11597contigM-pyrifera_M_contig11597:88..8983 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig11597.3312.1mRNA_M-pyrifera_M_contig11597.3312.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig11597 88..8983 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig11597.3312.1 ID=prot_M-pyrifera_M_contig11597.3312.1|Name=mRNA_M-pyrifera_M_contig11597.3312.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=200bp
MYINIKVHGGTGEDDPGPGGRRSVRQSLPYMLAPTKSQDRPLHRPLHCHR
LDKPTGGLLVCAKTRPALTAICEAFKNRLISKRYVALVAGELEGSGAIVT
PLSGKACETNYRVRGEPVRSLKTPVITTVDLWPVTGRFHQLRRHLASIGC
PILGDERYTPEGSPFQDGGMFLTAVGLTLSHPITGEELNFSLPEPAKYE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006145PsdUridine_synth_RsuA/RluA
IPR020103PsdUridine_synth_cat_dom_sf