prot_M-pyrifera_M_contig115865.3295.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig115865.3295.1
Unique Nameprot_M-pyrifera_M_contig115865.3295.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length64
Homology
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BLAST of mRNA_M-pyrifera_M_contig115865.3295.1 vs. uniprot
Match: A0A842WJH4_9ARCH (Uncharacterized protein n=1 Tax=Candidatus Micrarchaeota archaeon TaxID=2250274 RepID=A0A842WJH4_9ARCH)

HSP 1 Score: 52.8 bits (125), Expect = 2.060e-6
Identity = 28/42 (66.67%), Postives = 29/42 (69.05%), Query Frame = 0 
Query:    6 DRLISAGADVNAADSAGWTPLMNAASMGKAEFCTKLLASGAD 47
            +RLI AGADVNA D  GWTPLMNAA  G AE    LL  GAD
Sbjct:  247 ERLIEAGADVNAVDGLGWTPLMNAARKGHAEMVELLLDQGAD 288
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig115865.3295.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A842WJH4_9ARCH2.060e-666.67Uncharacterized protein n=1 Tax=Candidatus Micrarc... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13637Ank_4coord: 2..41
e-value: 5.1E-7
score: 30.1
NoneNo IPR availablePANTHERPTHR24180FAMILY NOT NAMEDcoord: 3..61
NoneNo IPR availablePANTHERPTHR24180:SF1526S PROTEASOME REGULATORY SUBUNIT P28-RELATEDcoord: 3..61
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..64
e-value: 4.9E-17
score: 64.2
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 3..61
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 21..53
score: 10.579
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 1..64
score: 17.847

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig115865contigM-pyrifera_M_contig115865:371..562 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig115865.3295.1mRNA_M-pyrifera_M_contig115865.3295.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig115865 371..562 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig115865.3295.1 ID=prot_M-pyrifera_M_contig115865.3295.1|Name=mRNA_M-pyrifera_M_contig115865.3295.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=64bp
SLSLLDRLISAGADVNAADSAGWTPLMNAASMGKAEFCTKLLASGADVNM
STGPPHHWTALARA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036770Ankyrin_rpt-contain_sf
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom