prot_M-pyrifera_M_contig115705.3259.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig115705.3259.1
Unique Nameprot_M-pyrifera_M_contig115705.3259.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length124
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig115705.3259.1 vs. uniprot
Match: A0A7J5TRN3_9BACT (Uncharacterized protein n=2 Tax=Rudanella paleaurantiibacter TaxID=2614655 RepID=A0A7J5TRN3_9BACT)

HSP 1 Score: 50.8 bits (120), Expect = 9.290e-5
Identity = 31/96 (32.29%), Postives = 54/96 (56.25%), Query Frame = 0 
Query:   29 TYDAVGNVVEVRRWGAGGLVAVGRTE---YDAETMRFGVRKTNALGFVISHTFDPALGTILSTTNENNITTKYKTNLLGQPLETIRADGAIESIER 121
            T+D  GN+ +       G     RT+   +D+   RF +R TNALG   S T+DPALG++L++T+ N + + ++ +  G+ ++     G  E++ER
Sbjct: 2628 THDVFGNITQTESRAWNGTQVESRTDQFVFDSRG-RFQIRMTNALGQQTSATYDPALGSVLTSTDRNGLVSNFQYDAFGRMVKVTTPTGE-ETVER 2721
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig115705.3259.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A7J5TRN3_9BACT9.290e-532.29Uncharacterized protein n=2 Tax=Rudanella paleaura... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig115705contigM-pyrifera_M_contig115705:52..423 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig115705.3259.1mRNA_M-pyrifera_M_contig115705.3259.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig115705 52..423 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig115705.3259.1 ID=prot_M-pyrifera_M_contig115705.3259.1|Name=mRNA_M-pyrifera_M_contig115705.3259.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=124bp
YTPDFNTGALLGQVEGVEDAKYTHGINKTYDAVGNVVEVRRWGAGGLVAV
GRTEYDAETMRFGVRKTNALGFVISHTFDPALGTILSTTNENNITTKYKT
NLLGQPLETIRADGAIESIERRWC
back to top