prot_M-pyrifera_M_contig115658.3244.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig115658.3244.1
Unique Nameprot_M-pyrifera_M_contig115658.3244.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length71
Homology
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BLAST of mRNA_M-pyrifera_M_contig115658.3244.1 vs. uniprot
Match: A0A7S4MT69_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4MT69_9EUKA)

HSP 1 Score: 83.6 bits (205), Expect = 2.720e-18
Identity = 39/71 (54.93%), Postives = 51/71 (71.83%), Query Frame = 0 
Query:    1 MVYPRDFVMSRGIRRKEDGTIISNHIACEHPKAGEVKGYVRGQLRASGYHIKPNDGGGCTVTYVVQVDPKG 71
            MV  RDFVM+R ++R +DGTI+SNH++     A + KG+VRG + ASGY +KPN  G  T  YVVQ+DPKG
Sbjct:  106 MVTNRDFVMARAVKRCDDGTILSNHVSVVDDDAPDAKGFVRGDVFASGYWLKPNGDGTSTAAYVVQIDPKG 176
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BLAST of mRNA_M-pyrifera_M_contig115658.3244.1 vs. uniprot
Match: A0A7S1IDR3_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1IDR3_9EUGL)

HSP 1 Score: 60.5 bits (145), Expect = 2.510e-9
Identity = 31/74 (41.89%), Postives = 45/74 (60.81%), Query Frame = 0 
Query:    2 VYPRDFVMSRGIRRKEDGTIISNHIACEHPK----AGEVKGYVRGQLRASGYHIKPNDGGGCTVTYVVQVDPKG 71
            ++ RDFV +       DG+ +S   + EHPK    +G     VRG++  SGY++ PN+ G CTV+Y+VQ DPKG
Sbjct:  124 LWDRDFVWAELCTMLPDGSGLSCGCSVEHPKMPPESGGFFNAVRGEISCSGYYVSPNEDGTCTVSYLVQCDPKG 197
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BLAST of mRNA_M-pyrifera_M_contig115658.3244.1 vs. uniprot
Match: A0A0J9Y8S8_BRUMA (Bm1578 (Fragment) n=1 Tax=Brugia malayi TaxID=6279 RepID=A0A0J9Y8S8_BRUMA)

HSP 1 Score: 52.0 bits (123), Expect = 2.910e-7
Identity = 28/67 (41.79%), Postives = 34/67 (50.75%), Query Frame = 0 
Query:    5 RDFVMSRGIRRKEDGTIISNHIACEHPKAGEVKGYVRGQLRASGYHIKPNDGGGCTVTYVVQVDPKG 71
            RDFV+ R          I +H  C H K    KGY+RG +  + YHI+     GC VTYV   DPKG
Sbjct:    1 RDFVLQRSWLDTGKEKYICSHSVC-HKKYPPAKGYIRGVVHLTAYHIRDMGQNGCQVTYVNHSDPKG 66
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BLAST of mRNA_M-pyrifera_M_contig115658.3244.1 vs. uniprot
Match: A0A6B2LG69_9EUKA (START domain-containing protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LG69_9EUKA)

HSP 1 Score: 52.4 bits (124), Expect = 2.650e-6
Identity = 31/69 (44.93%), Postives = 37/69 (53.62%), Query Frame = 0 
Query:    5 RDFVMSRGIRRKEDGT--IISNHIACEHPKAGEVKGYVRGQLRASGYHIKPNDGGGCTVTYVVQVDPKG 71
            RDF   R   RKEDG+  II NH    H    E K YVR     +GY I+PN  G CT+ Y+ Q D +G
Sbjct:  103 RDFCNQRSWWRKEDGSEYIIHNHSVI-HKDCPEKKQYVRAWSHMTGYMIRPNTDGTCTMVYLTQTDLRG 170
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BLAST of mRNA_M-pyrifera_M_contig115658.3244.1 vs. uniprot
Match: A0A0N4TU01_BRUPA (START domain-containing protein n=5 Tax=Onchocercidae TaxID=6296 RepID=A0A0N4TU01_BRUPA)

HSP 1 Score: 51.2 bits (121), Expect = 8.700e-6
Identity = 28/67 (41.79%), Postives = 34/67 (50.75%), Query Frame = 0 
Query:    5 RDFVMSRGIRRKEDGTIISNHIACEHPKAGEVKGYVRGQLRASGYHIKPNDGGGCTVTYVVQVDPKG 71
            RDFV+ R          I +H  C H K    KGY+RG +  + YHI+     GC VTYV   DPKG
Sbjct:  128 RDFVLQRSWLDIGKEKYICSHSVC-HKKYPPAKGYIRGVVHLTAYHIRDMGQNGCQVTYVNHSDPKG 193
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig115658.3244.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A7S4MT69_9EUKA2.720e-1854.93Hypothetical protein n=1 Tax=Vannella sp. CB-2014 ... [more]
A0A7S1IDR3_9EUGL2.510e-941.89Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A0A0J9Y8S8_BRUMA2.910e-741.79Bm1578 (Fragment) n=1 Tax=Brugia malayi TaxID=6279... [more]
A0A6B2LG69_9EUKA2.650e-644.93START domain-containing protein n=1 Tax=Arcella in... [more]
A0A0N4TU01_BRUPA8.700e-641.79START domain-containing protein n=5 Tax=Onchocerci... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023393START-like domain superfamilyGENE3D3.30.530.20coord: 1..71
e-value: 4.4E-19
score: 71.0
IPR002913START domainPFAMPF01852STARTcoord: 2..71
e-value: 1.6E-15
score: 57.1
IPR002913START domainPROSITEPS50848STARTcoord: 1..71
score: 18.551
NoneNo IPR availablePANTHERPTHR19308:SF14coord: 2..71
NoneNo IPR availablePANTHERPTHR19308PHOSPHATIDYLCHOLINE TRANSFER PROTEINcoord: 2..71
NoneNo IPR availableSUPERFAMILY55961Bet v1-likecoord: 2..71

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig115658contigM-pyrifera_M_contig115658:142..354 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig115658.3244.1mRNA_M-pyrifera_M_contig115658.3244.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig115658 127..354 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig115658.3244.1 ID=prot_M-pyrifera_M_contig115658.3244.1|Name=mRNA_M-pyrifera_M_contig115658.3244.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=71bp
MVYPRDFVMSRGIRRKEDGTIISNHIACEHPKAGEVKGYVRGQLRASGYH
IKPNDGGGCTVTYVVQVDPKG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023393START-like_dom_sf
IPR002913START_lipid-bd_dom