prot_M-pyrifera_M_contig115474.3208.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig115474.3208.1
Unique Nameprot_M-pyrifera_M_contig115474.3208.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length106
Homology
BLAST of mRNA_M-pyrifera_M_contig115474.3208.1 vs. uniprot
Match: A0A5C3LHW5_9AGAR (LsmAD domain-containing protein n=1 Tax=Coprinopsis marcescibilis TaxID=230819 RepID=A0A5C3LHW5_9AGAR)

HSP 1 Score: 100 bits (248), Expect = 2.480e-22
Identity = 56/97 (57.73%), Postives = 66/97 (68.04%), Query Frame = 0
Query:    5 GGPRRLQRWVP--DGDTAATALDE---GLGSGTGAWDQFEANRTLFGVEASFDEAAYTTPLDRSGPDYRRREQEAARIAQEIKRQASANVHVAEERG 96
            G  R LQ WVP  DG+  AT  DE   G  +G+GAWDQF AN TLFGV+ASFDE  YTT +DR+ PD++ RE+ A RIA EI    + N HVAEERG
Sbjct:  168 GRERELQAWVPSGDGNAGATLGDEDTFGPNTGSGAWDQFTANETLFGVKASFDEDVYTTRIDRNAPDFKERERNAQRIANEIMGTTTNNPHVAEERG 264          
BLAST of mRNA_M-pyrifera_M_contig115474.3208.1 vs. uniprot
Match: A0A197JHC0_9FUNG (LsmAD domain-containing protein n=1 Tax=Linnemannia elongata AG-77 TaxID=1314771 RepID=A0A197JHC0_9FUNG)

HSP 1 Score: 96.7 bits (239), Expect = 4.070e-21
Identity = 52/106 (49.06%), Postives = 70/106 (66.04%), Query Frame = 0
Query:    8 RRLQRWVPDGDTAATALDEGLGS----GTGAWDQFEANRTLFGVEASFDEAAYTTPLDRSGPDYRRREQEAARIAQEIKRQASANVHVAEERGRRSD---LSEEQL 106
            R L++W P+G+ +   +++ LG     G+ +WDQF AN  LFGV   FDE  YTT LDR+G DY+ REQ+A +IAQEI++  S+NVH+ EERG   D   L EE L
Sbjct:  184 RDLKKWAPEGNLSYGGIEDDLGDTNHHGSASWDQFAANERLFGVRTDFDEEIYTTKLDRTGADYKAREQQAMQIAQEIQQSVSSNVHMREERGLAVDDSGLDEEDL 289          
BLAST of mRNA_M-pyrifera_M_contig115474.3208.1 vs. uniprot
Match: G8BU30_TETPH (LsmAD domain-containing protein n=1 Tax=Tetrapisispora phaffii (strain ATCC 24235 / CBS 4417 / NBRC 1672 / NRRL Y-8282 / UCD 70-5) TaxID=1071381 RepID=G8BU30_TETPH)

HSP 1 Score: 96.3 bits (238), Expect = 5.500e-21
Identity = 46/89 (51.69%), Postives = 66/89 (74.16%), Query Frame = 0
Query:    8 RRLQRWVPDGDTAATALDEGLGSGTGAWDQFEANRTLFGVEASFDEAAYTTPLDRSGPDYRRREQEAARIAQEIKRQASANVHVAEERG 96
            R LQ+W P+ D ++ AL++GL  G+  WDQF  N   FGV +S+DE  YTT +D+S P+YR+R QEA ++A+EI+ Q S+N+HVAE+RG
Sbjct:  181 RELQKWAPEADDSS-ALNQGLDDGSSNWDQFAVNEKKFGVTSSYDEHFYTTKIDKSHPEYRKRLQEAEKLAKEIESQGSSNIHVAEDRG 268          
BLAST of mRNA_M-pyrifera_M_contig115474.3208.1 vs. uniprot
Match: A0A4Q2E0Y1_9AGAR (LsmAD domain-containing protein n=1 Tax=Candolleomyces aberdarensis TaxID=2316362 RepID=A0A4Q2E0Y1_9AGAR)

HSP 1 Score: 92.4 bits (228), Expect = 1.240e-19
Identity = 52/97 (53.61%), Postives = 62/97 (63.92%), Query Frame = 0
Query:    5 GGPRRLQRWVPDGD--TAATALDE---GLGSGTGAWDQFEANRTLFGVEASFDEAAYTTPLDRSGPDYRRREQEAARIAQEIKRQASANVHVAEERG 96
            G  R LQ WVP  D   A++  DE   G  + T +WDQF  N  LFGV+ASFDE  YTT LDR+ PD++ RE+EA RIA EI    + N HVAEERG
Sbjct:  133 GRERELQAWVPSNDIPVASSNTDEDTFGTSNATTSWDQFSVNEQLFGVKASFDEEVYTTKLDRNAPDFKEREREAQRIANEILGATTNNPHVAEERG 229          
BLAST of mRNA_M-pyrifera_M_contig115474.3208.1 vs. uniprot
Match: W2S9F8_9EURO (LsmAD domain-containing protein n=1 Tax=Cyphellophora europaea CBS 101466 TaxID=1220924 RepID=W2S9F8_9EURO)

HSP 1 Score: 92.0 bits (227), Expect = 1.710e-19
Identity = 50/92 (54.35%), Postives = 64/92 (69.57%), Query Frame = 0
Query:    6 GPRRLQRWVPDGDTAATALDEGLGSG-TGAWDQFEANRTLFGVEASFDEAAYTTPLDRSGPDYRRREQEAARIAQEIKRQASANVHVAEERG 96
            G R LQ+WVPD   A+ A D  L SG TG+WDQF AN+ LFG ++++DE+ YTT LDRS   YR RE +A ++A+EI+   S N HV EERG
Sbjct:  133 GERMLQKWVPD---ASDATDFSLESGNTGSWDQFAANKQLFGAQSTYDESYYTTHLDRSSESYRAREAKATKLAKEIEGSQSTNQHVREERG 221          
BLAST of mRNA_M-pyrifera_M_contig115474.3208.1 vs. uniprot
Match: PBP1_CRYNH (PAB1-binding protein 1 n=11 Tax=Cryptococcus TaxID=5206 RepID=PBP1_CRYNH)

HSP 1 Score: 91.7 bits (226), Expect = 2.300e-19
Identity = 52/114 (45.61%), Postives = 70/114 (61.40%), Query Frame = 0
Query:    3 RGGGP--RRLQRWVPDGDTAATALDEGLGS------GTG---AWDQFEANRTLFGVEASFDEAAYTTPLDRSGPDYRRREQEAARIAQEIKRQASANVHVAEERGRRSDLSEEQ 105
            R  GP  R LQ WVPDG +     + G G+      GT     WDQFE N  LFG +  F E  YTT L++SGPD+ +RE+EA R+A++I  Q S N H+AEERG+ +D+ +E+
Sbjct:   84 RAAGPVERELQPWVPDGPSPPPQSNGGSGNADFETFGTTNNITWDQFETNERLFGAKTDFKEELYTTKLNKSGPDFHKREKEAERLAKQIMGQTSKNAHIAEERGQATDIRDEE 197          
BLAST of mRNA_M-pyrifera_M_contig115474.3208.1 vs. uniprot
Match: A0A2B7XTH0_9EURO (LsmAD domain-containing protein n=1 Tax=Helicocarpus griseus UAMH5409 TaxID=1447875 RepID=A0A2B7XTH0_9EURO)

HSP 1 Score: 91.7 bits (226), Expect = 2.350e-19
Identity = 49/89 (55.06%), Postives = 57/89 (64.04%), Query Frame = 0
Query:    8 RRLQRWVPDGDTAATALDEGLGSGTGAWDQFEANRTLFGVEASFDEAAYTTPLDRSGPDYRRREQEAARIAQEIKRQASANVHVAEERG 96
            R LQRW P  D       E  GSG   WDQFEAN  LFG   S+DE  YTT +DRS P Y+R+E EAARIA+EI+   + NVH+ EERG
Sbjct:  244 RELQRWEPGADAPVDMSLESSGSGN--WDQFEANERLFGATTSYDENLYTTKIDRSDPSYKRKEAEAARIAREIETSDTDNVHLREERG 330          
BLAST of mRNA_M-pyrifera_M_contig115474.3208.1 vs. uniprot
Match: A0A1Y2GAT5_9FUNG (LsmAD domain-containing protein n=1 Tax=Lobosporangium transversale TaxID=64571 RepID=A0A1Y2GAT5_9FUNG)

HSP 1 Score: 90.9 bits (224), Expect = 4.320e-19
Identity = 52/106 (49.06%), Postives = 64/106 (60.38%), Query Frame = 0
Query:    8 RRLQRWVPDGDTAATALDEGLGSG----TGAWDQFEANRTLFGVEASFDEAAYTTPLDRSGPDYRRREQEAARIAQEIKRQASANVHVAEERGRRSD---LSEEQL 106
            R L++W P+   A T +++ LG         WDQF AN  LFGV+  FDE  YTT LDRSG DY+ REQ A +IA EI++  S NVH+ EERG   D   L EE L
Sbjct:  178 RDLKKWAPEEHVAFTGIEDELGDSHHHSRSGWDQFAANEKLFGVKTDFDEEIYTTKLDRSGADYKAREQHAIQIANEIQQSVSNNVHMREERGLAVDDSGLDEEDL 283          
BLAST of mRNA_M-pyrifera_M_contig115474.3208.1 vs. uniprot
Match: A0A074WUT0_9PEZI (LsmAD domain-containing protein n=1 Tax=Aureobasidium namibiae CBS 147.97 TaxID=1043004 RepID=A0A074WUT0_9PEZI)

HSP 1 Score: 89.7 bits (221), Expect = 1.110e-18
Identity = 51/90 (56.67%), Postives = 56/90 (62.22%), Query Frame = 0
Query:    8 RRLQRWVPDGDTAATALDEGL--GSGTGAWDQFEANRTLFGVEASFDEAAYTTPLDRSGPDYRRREQEAARIAQEIKRQASANVHVAEER 95
            R LQRW P  DTA   +D  L   S  G WDQF AN  L+ V + +DE  YTT +DRS PDYRRR  EA RIA EI R A  N HVAEER
Sbjct:  225 RELQRWQPSADTA---IDMSLEDNSRPGEWDQFAANEALYNVRSDYDENIYTTTIDRSDPDYRRRAAEADRIADEINRSAPVNSHVAEER 311          
BLAST of mRNA_M-pyrifera_M_contig115474.3208.1 vs. uniprot
Match: A5DIA9_PICGU (LsmAD domain-containing protein n=3 Tax=Meyerozyma TaxID=766728 RepID=A5DIA9_PICGU)

HSP 1 Score: 88.6 bits (218), Expect = 2.750e-18
Identity = 46/95 (48.42%), Postives = 66/95 (69.47%), Query Frame = 0
Query:    8 RRLQRWVPDGDTAATALDEGLGSGTGAWDQFEANRTLFGVEASFDEAAYTTPLDRSGPDYRRREQEAARIAQEIKRQASANVHVAEERGRRSDLS 102
            R LQRWVPD D+   +L++   SG G WDQF+ N   FGV +++DE+ YTT ++ SG DY++R +EA  IA+EI+ Q+S + H+ EERG + D S
Sbjct:  178 RELQRWVPDDDSKMVSLED---SGKGHWDQFKVNEEKFGVGSTYDESLYTTKINTSGADYKKRLKEATIIAREIESQSSTDRHILEERGIQVDDS 269          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig115474.3208.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5C3LHW5_9AGAR2.480e-2257.73LsmAD domain-containing protein n=1 Tax=Coprinopsi... [more]
A0A197JHC0_9FUNG4.070e-2149.06LsmAD domain-containing protein n=1 Tax=Linnemanni... [more]
G8BU30_TETPH5.500e-2151.69LsmAD domain-containing protein n=1 Tax=Tetrapisis... [more]
A0A4Q2E0Y1_9AGAR1.240e-1953.61LsmAD domain-containing protein n=1 Tax=Candolleom... [more]
W2S9F8_9EURO1.710e-1954.35LsmAD domain-containing protein n=1 Tax=Cyphelloph... [more]
PBP1_CRYNH2.300e-1945.61PAB1-binding protein 1 n=11 Tax=Cryptococcus TaxID... [more]
A0A2B7XTH0_9EURO2.350e-1955.06LsmAD domain-containing protein n=1 Tax=Helicocarp... [more]
A0A1Y2GAT5_9FUNG4.320e-1949.06LsmAD domain-containing protein n=1 Tax=Lobosporan... [more]
A0A074WUT0_9PEZI1.110e-1856.67LsmAD domain-containing protein n=1 Tax=Aureobasid... [more]
A5DIA9_PICGU2.750e-1848.42LsmAD domain-containing protein n=3 Tax=Meyerozyma... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009604LsmAD domainSMARTSM01272LsmAD_2coord: 45..105
e-value: 2.8E-22
score: 90.0
IPR009604LsmAD domainPFAMPF06741LsmADcoord: 45..105
e-value: 3.0E-22
score: 78.9
NoneNo IPR availablePANTHERPTHR12854:SF7ATAXIN-2 HOMOLOGcoord: 2..100
NoneNo IPR availablePANTHERPTHR12854ATAXIN 2-RELATEDcoord: 2..100

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig115474contigM-pyrifera_M_contig115474:182..499 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig115474.3208.1mRNA_M-pyrifera_M_contig115474.3208.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig115474 182..499 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig115474.3208.1 ID=prot_M-pyrifera_M_contig115474.3208.1|Name=mRNA_M-pyrifera_M_contig115474.3208.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=106bp
GGRGGGPRRLQRWVPDGDTAATALDEGLGSGTGAWDQFEANRTLFGVEAS
FDEAAYTTPLDRSGPDYRRREQEAARIAQEIKRQASANVHVAEERGRRSD
LSEEQL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009604LsmAD_domain