prot_M-pyrifera_M_contig115335.3190.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig115335.3190.1
Unique Nameprot_M-pyrifera_M_contig115335.3190.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length67
Homology
BLAST of mRNA_M-pyrifera_M_contig115335.3190.1 vs. uniprot
Match: A0A7S2TM98_9EUKA (Serine protease n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TM98_9EUKA)

HSP 1 Score: 51.6 bits (122), Expect = 5.940e-6
Identity = 23/54 (42.59%), Postives = 32/54 (59.26%), Query Frame = 0
Query:    2 YFSSSLYVCSGTMIGNGLVLTARHCIYDIDSRKWAE-RVYVAPGMTGFTNWPVG 54
            + +   +VC+G +IGN +VLT  HC++DID+RKW   R    P   G  N P G
Sbjct:  254 FIAQGSHVCTGALIGNRVVLTNAHCVFDIDTRKWFNARFQFCPARNGRLNDPYG 307          
BLAST of mRNA_M-pyrifera_M_contig115335.3190.1 vs. uniprot
Match: UPI000E0FEEF0 (trypsin-like serine protease n=1 Tax=Synechococcus sp. N32 TaxID=2575514 RepID=UPI000E0FEEF0)

HSP 1 Score: 49.3 bits (116), Expect = 3.870e-5
Identity = 26/52 (50.00%), Postives = 32/52 (61.54%), Query Frame = 0
Query:    1 MYFSSSLYVCSGTMIGNGLVLTARHCIYDIDSRKW--AERVYVAPGMTGFTN 50
            M F +S YVCSG+MIG G+V+TA HCI +    K   A+ VY  PG T   N
Sbjct:  129 MRFGNSNYVCSGSMIGKGIVVTAAHCIANWGQGKSGIADEVYFIPGATKRAN 180          
BLAST of mRNA_M-pyrifera_M_contig115335.3190.1 vs. uniprot
Match: UPI000E0E9A98 (trypsin-like serine protease n=1 Tax=Synechococcus sp. N32 TaxID=2575514 RepID=UPI000E0E9A98)

HSP 1 Score: 48.5 bits (114), Expect = 6.990e-5
Identity = 21/52 (40.38%), Postives = 30/52 (57.69%), Query Frame = 0
Query:    1 MYFSSSLYVCSGTMIGNGLVLTARHCIYDIDS--RKWAERVYVAPGMTGFTN 50
            M F +S YVCS ++IG GL +TA HC+++       WA  +Y  P  T  +N
Sbjct:   16 MRFGNSAYVCSASLIGKGLAVTAAHCVHEYGKGLSGWATDIYFVPAATSSSN 67          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig115335.3190.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A7S2TM98_9EUKA5.940e-642.59Serine protease n=1 Tax=Lotharella oceanica TaxID=... [more]
UPI000E0FEEF03.870e-550.00trypsin-like serine protease n=1 Tax=Synechococcus... [more]
UPI000E0E9A986.990e-540.38trypsin-like serine protease n=1 Tax=Synechococcus... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.40.10.10coord: 1..66
e-value: 2.3E-11
score: 45.6
IPR001254Serine proteases, trypsin domainPFAMPF00089Trypsincoord: 3..32
e-value: 2.2E-5
score: 24.4
IPR009003Peptidase S1, PA clanSUPERFAMILY50494Trypsin-like serine proteasescoord: 4..52

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig115335contigM-pyrifera_M_contig115335:363..563 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig115335.3190.1mRNA_M-pyrifera_M_contig115335.3190.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig115335 351..563 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig115335.3190.1 ID=prot_M-pyrifera_M_contig115335.3190.1|Name=mRNA_M-pyrifera_M_contig115335.3190.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=67bp
MYFSSSLYVCSGTMIGNGLVLTARHCIYDIDSRKWAERVYVAPGMTGFTN
WPVGVHAAHSFGGWTAY
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001254Trypsin_dom
IPR009003Peptidase_S1_PA