prot_M-pyrifera_M_contig11518.3161.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig11518.3161.1
Unique Nameprot_M-pyrifera_M_contig11518.3161.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length99
Homology
BLAST of mRNA_M-pyrifera_M_contig11518.3161.1 vs. uniprot
Match: A0A6H5JHB6_9PHAE (RF_PROK_I domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JHB6_9PHAE)

HSP 1 Score: 186 bits (471), Expect = 5.760e-55
Identity = 88/99 (88.89%), Postives = 93/99 (93.94%), Query Frame = 0
Query:    1 GWLRREAGVHRLVRNSPYDPTGRRHTSFAQVRIFPEADSVSGGAAKVEIPAKELKIDTMRAQGAGGQHVNTTDSAVRITHLPTGLVALSQSDRSQHKNR 99
            GWLR EAGVHRLVRNSPYDP GRRHTSF+QVR+FPEA   SG AAKVEIPAK+LK+DTMRAQGAGGQHVNTTDSAVR+THLPTGLVALSQSDRSQHKNR
Sbjct:  279 GWLRSEAGVHRLVRNSPYDPNGRRHTSFSQVRVFPEAGGESGDAAKVEIPAKDLKVDTMRAQGAGGQHVNTTDSAVRLTHLPTGLVALSQSDRSQHKNR 377          
BLAST of mRNA_M-pyrifera_M_contig11518.3161.1 vs. uniprot
Match: A0A8K1CGR1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CGR1_PYTOL)

HSP 1 Score: 149 bits (375), Expect = 3.100e-41
Identity = 70/101 (69.31%), Postives = 81/101 (80.20%), Query Frame = 0
Query:    1 GWLRREAGVHRLVRNSPYDPTGRRHTSFAQVRIFPEADSVSGGAAK--VEIPAKELKIDTMRAQGAGGQHVNTTDSAVRITHLPTGLVALSQSDRSQHKNR 99
            GW + EAGVHRLVR SP+D  GRRHTSFAQVR++P A    GG  K  +EIP K+L+IDT R+ GAGGQHVNTTDSAVRITHLPTG+V   QSDRSQH+N+
Sbjct:  225 GWAKTEAGVHRLVRISPFDSAGRRHTSFAQVRVYPMAAMAGGGQGKHAIEIPTKDLRIDTYRSSGAGGQHVNTTDSAVRITHLPTGIVVTCQSDRSQHRNK 325          
BLAST of mRNA_M-pyrifera_M_contig11518.3161.1 vs. uniprot
Match: A0A662WW55_9STRA (RF_PROK_I domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WW55_9STRA)

HSP 1 Score: 146 bits (368), Expect = 8.030e-40
Identity = 65/99 (65.66%), Postives = 80/99 (80.81%), Query Frame = 0
Query:    1 GWLRREAGVHRLVRNSPYDPTGRRHTSFAQVRIFPEADSVSGGAAKVEIPAKELKIDTMRAQGAGGQHVNTTDSAVRITHLPTGLVALSQSDRSQHKNR 99
            GW + EAGVHRLVR SP+D  GRRHTSFAQVR++P A    G    VE+PAK+L++DT R+ G GGQHVN+TDSA+RITHLP+G+V  SQSDRSQH+N+
Sbjct:  265 GWAKSEAGVHRLVRVSPFDSAGRRHTSFAQVRVYPMASEGGGSRQDVELPAKDLRVDTFRSSGPGGQHVNSTDSAIRITHLPSGIVVQSQSDRSQHRNK 363          
BLAST of mRNA_M-pyrifera_M_contig11518.3161.1 vs. uniprot
Match: A0A140ECK2_9STRA (Mitochondrial peptide chain release factor 2 n=1 Tax=Vischeria sp. CAUP Q 202 TaxID=1805947 RepID=A0A140ECK2_9STRA)

HSP 1 Score: 145 bits (367), Expect = 1.160e-39
Identity = 70/99 (70.71%), Postives = 82/99 (82.83%), Query Frame = 0
Query:    1 GWLRREAGVHRLVRNSPYDPTGRRHTSFAQVRIFPEADSVSGGAAKVEIPAKELKIDTMRAQGAGGQHVNTTDSAVRITHLPTGLVALSQSDRSQHKNR 99
            GW R EAGVHRLVR SP+D   +RHTSFAQVR+FPE+ S S  A  VEIPAK+L+IDT R+QGAGGQ VNTTDSAVR+ HLPTGLVA  Q++RSQH+N+
Sbjct:  277 GWFRTEAGVHRLVRMSPFDANKKRHTSFAQVRVFPESTSSSSSA--VEIPAKDLRIDTYRSQGAGGQSVNTTDSAVRVVHLPTGLVATCQNERSQHRNK 373          
BLAST of mRNA_M-pyrifera_M_contig11518.3161.1 vs. uniprot
Match: A0A421GPH8_9STRA (RF_PROK_I domain-containing protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421GPH8_9STRA)

HSP 1 Score: 142 bits (358), Expect = 3.300e-39
Identity = 66/99 (66.67%), Postives = 79/99 (79.80%), Query Frame = 0
Query:    1 GWLRREAGVHRLVRNSPYDPTGRRHTSFAQVRIFPEADSVSGGAAKVEIPAKELKIDTMRAQGAGGQHVNTTDSAVRITHLPTGLVALSQSDRSQHKNR 99
            GW + EAGVHRLVR SP+D  GRRHTSFAQVR++P A    G   ++EI  K+L+IDT R+ G GGQHVNTTDSA+RITHLPTG+V  SQSDRSQH+N+
Sbjct:  165 GWTKSEAGVHRLVRISPFDTAGRRHTSFAQVRVYPMAPE-GGSKQEIEISTKDLRIDTFRSSGPGGQHVNTTDSAIRITHLPTGIVVQSQSDRSQHRNK 262          
BLAST of mRNA_M-pyrifera_M_contig11518.3161.1 vs. uniprot
Match: H3GA21_PHYRM (RF_PROK_I domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GA21_PHYRM)

HSP 1 Score: 142 bits (357), Expect = 9.820e-39
Identity = 66/99 (66.67%), Postives = 80/99 (80.81%), Query Frame = 0
Query:    1 GWLRREAGVHRLVRNSPYDPTGRRHTSFAQVRIFPEADSVSGGAAKVEIPAKELKIDTMRAQGAGGQHVNTTDSAVRITHLPTGLVALSQSDRSQHKNR 99
            GW + EAGVHRLVR SP+D  GRRHTSFAQVR++P A S      ++EIP K+L+IDT R+ G GGQHVN+TDSA+RITHLPTG+V  SQSDRSQH+N+
Sbjct:  204 GWAKSEAGVHRLVRISPFDSAGRRHTSFAQVRVYPMA-SEGRSKEEIEIPTKDLRIDTFRSSGPGGQHVNSTDSAIRITHLPTGIVVQSQSDRSQHRNK 301          
BLAST of mRNA_M-pyrifera_M_contig11518.3161.1 vs. uniprot
Match: A0A2D4CE05_PYTIN (Peptide chain release factor 2 n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CE05_PYTIN)

HSP 1 Score: 142 bits (358), Expect = 9.880e-39
Identity = 68/100 (68.00%), Postives = 79/100 (79.00%), Query Frame = 0
Query:    1 GWLRREAGVHRLVRNSPYDPTGRRHTSFAQVRIFPEADSVSGGAAKV-EIPAKELKIDTMRAQGAGGQHVNTTDSAVRITHLPTGLVALSQSDRSQHKNR 99
            GW + EAGVHRLVR SP+D  GRRHTSFAQVR++P A       + V EIP K+L+IDT R+ GAGGQHVNTTDSAVRITHLPTG+V   QSDRSQH+N+
Sbjct:  219 GWAKTEAGVHRLVRLSPFDSAGRRHTSFAQVRVYPVAALAGASNSAVHEIPVKDLRIDTYRSSGAGGQHVNTTDSAVRITHLPTGIVVTCQSDRSQHRNK 318          
BLAST of mRNA_M-pyrifera_M_contig11518.3161.1 vs. uniprot
Match: K3WM13_GLOUD (RF_PROK_I domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WM13_GLOUD)

HSP 1 Score: 140 bits (354), Expect = 1.380e-38
Identity = 65/100 (65.00%), Postives = 81/100 (81.00%), Query Frame = 0
Query:    1 GWLRREAGVHRLVRNSPYDPTGRRHTSFAQVRIFPEADSVSGGAAK-VEIPAKELKIDTMRAQGAGGQHVNTTDSAVRITHLPTGLVALSQSDRSQHKNR 99
            GW++ EAGVHRLVR SP+D   RRHTSFAQVR++P A   + G+   ++I  K+L+IDT R+ GAGGQHVNTTDSA+RITHLPTG+V  SQSDRSQH+N+
Sbjct:  165 GWVKTEAGVHRLVRVSPFDSAARRHTSFAQVRVYPMAAMANSGSKHLIDIAMKDLRIDTFRSSGAGGQHVNTTDSAIRITHLPTGIVVQSQSDRSQHRNK 264          
BLAST of mRNA_M-pyrifera_M_contig11518.3161.1 vs. uniprot
Match: A0A2P4XMB8_9STRA (Peptide chain release factor n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XMB8_9STRA)

HSP 1 Score: 136 bits (342), Expect = 4.650e-38
Identity = 64/99 (64.65%), Postives = 77/99 (77.78%), Query Frame = 0
Query:    1 GWLRREAGVHRLVRNSPYDPTGRRHTSFAQVRIFPEADSVSGGAAKVEIPAKELKIDTMRAQGAGGQHVNTTDSAVRITHLPTGLVALSQSDRSQHKNR 99
            GW + EAGVHRLVR SP+D  GRRHTSFAQVR++P A         +EI  K+L+IDT R+ G GGQHVN+TDSA+RITHLPTG+V  SQSDRSQH+N+
Sbjct:   40 GWAKSEAGVHRLVRISPFDSAGRRHTSFAQVRVYPMATEGRSNE-DIEILTKDLRIDTFRSSGPGGQHVNSTDSAIRITHLPTGIVVQSQSDRSQHRNK 137          
BLAST of mRNA_M-pyrifera_M_contig11518.3161.1 vs. uniprot
Match: A0A3F2RRE3_9STRA (RF_PROK_I domain-containing protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RRE3_9STRA)

HSP 1 Score: 143 bits (361), Expect = 1.000e-37
Identity = 66/99 (66.67%), Postives = 80/99 (80.81%), Query Frame = 0
Query:    1 GWLRREAGVHRLVRNSPYDPTGRRHTSFAQVRIFPEADSVSGGAAKVEIPAKELKIDTMRAQGAGGQHVNTTDSAVRITHLPTGLVALSQSDRSQHKNR 99
            GW++ EAGVHRLVR SP+D  GRRHTSFAQVR++P A    G   ++EI  K+L+IDT R+ G GGQHVNTTDSA+RITHLPTG+V  SQSDRSQH+N+
Sbjct:  641 GWMKSEAGVHRLVRISPFDTAGRRHTSFAQVRVYPMAPE-GGSKQEIEISTKDLRIDTFRSSGPGGQHVNTTDSAIRITHLPTGIVVQSQSDRSQHRNK 738          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig11518.3161.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JHB6_9PHAE5.760e-5588.89RF_PROK_I domain-containing protein n=2 Tax=Ectoca... [more]
A0A8K1CGR1_PYTOL3.100e-4169.31Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A662WW55_9STRA8.030e-4065.66RF_PROK_I domain-containing protein n=2 Tax=Nothop... [more]
A0A140ECK2_9STRA1.160e-3970.71Mitochondrial peptide chain release factor 2 n=1 T... [more]
A0A421GPH8_9STRA3.300e-3966.67RF_PROK_I domain-containing protein n=2 Tax=Phytop... [more]
H3GA21_PHYRM9.820e-3966.67RF_PROK_I domain-containing protein n=1 Tax=Phytop... [more]
A0A2D4CE05_PYTIN9.880e-3968.00Peptide chain release factor 2 n=2 Tax=Pythium ins... [more]
K3WM13_GLOUD1.380e-3865.00RF_PROK_I domain-containing protein n=1 Tax=Globis... [more]
A0A2P4XMB8_9STRA4.650e-3864.65Peptide chain release factor n=1 Tax=Phytophthora ... [more]
A0A3F2RRE3_9STRA1.000e-3766.67RF_PROK_I domain-containing protein n=1 Tax=Phytop... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000352Peptide chain release factor class IPFAMPF00472RF-1coord: 46..99
e-value: 1.3E-22
score: 79.9
IPR000352Peptide chain release factor class IPROSITEPS00745RF_PROK_Icoord: 60..76
NoneNo IPR availableGENE3D3.30.70.1660coord: 1..36
e-value: 2.3E-41
score: 143.3
NoneNo IPR availableGENE3D3.30.160.20coord: 37..99
e-value: 2.3E-41
score: 143.3
NoneNo IPR availablePANTHERPTHR43116FAMILY NOT NAMEDcoord: 1..99
NoneNo IPR availablePANTHERPTHR43116:SF3PEPTIDE CHAIN RELEASE FACTOR PRFB1, CHLOROPLASTICcoord: 1..99
NoneNo IPR availableSUPERFAMILY75620Release factorcoord: 1..99
IPR005139Peptide chain release factorPFAMPF03462PCRFcoord: 1..31
e-value: 2.5E-9
score: 37.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig11518contigM-pyrifera_M_contig11518:1376..3738 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig11518.3161.1mRNA_M-pyrifera_M_contig11518.3161.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig11518 1375..3738 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig11518.3161.1 ID=prot_M-pyrifera_M_contig11518.3161.1|Name=mRNA_M-pyrifera_M_contig11518.3161.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=99bp
GWLRREAGVHRLVRNSPYDPTGRRHTSFAQVRIFPEADSVSGGAAKVEIP
AKELKIDTMRAQGAGGQHVNTTDSAVRITHLPTGLVALSQSDRSQHKNR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000352Pep_chain_release_fac_I
IPR005139PCRF