prot_M-pyrifera_M_contig115174.3158.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig115174.3158.1
Unique Nameprot_M-pyrifera_M_contig115174.3158.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length188
Homology
BLAST of mRNA_M-pyrifera_M_contig115174.3158.1 vs. uniprot
Match: A0A6I6AHN7_9PLAN (DUF1956 domain-containing protein n=2 Tax=Gimesia TaxID=1649453 RepID=A0A6I6AHN7_9PLAN)

HSP 1 Score: 370 bits (950), Expect = 5.150e-129
Identity = 186/188 (98.94%), Postives = 187/188 (99.47%), Query Frame = 0
Query:    1 EGGVSSTRQKILEVAGQVFAEKGFDRATSKEITELANTNAASVNYYFGGLEELYKAVLHEAGSRLITTDTIRSVIEEKSNPQAKLYAFMGIFVQALTSPISSSWVLRVISRELVHPTSVAAPFKGKERVERIFILKNIVSELMGLPANHPAVERGCLSIISPCFMLLICDRPSLQEMFPNLGFTQKDA 188
            EGGVSSTRQKILEVAGQVFAEKGFDRATSKEITELANTNAASVNYYFGGLEELYKAVLHEAGSRLITTDTIRSVIEEKSNPQAKLYAFMGIFVQAL SPISSSWVLRVISRELVHPTSVAAPFKGKERVERIFI+KNIVSELMGLPANHPAVERGCLSIISPCFMLLICDRPSLQEMFPNLGFTQKDA
Sbjct:   14 EGGVSSTRQKILEVAGQVFAEKGFDRATSKEITELANTNAASVNYYFGGLEELYKAVLHEAGSRLITTDTIRSVIEEKSNPQAKLYAFMGIFVQALASPISSSWVLRVISRELVHPTSVAAPFKGKERVERIFIIKNIVSELMGLPANHPAVERGCLSIISPCFMLLICDRPSLQEMFPNLGFTQKDA 201          
BLAST of mRNA_M-pyrifera_M_contig115174.3158.1 vs. uniprot
Match: A0A2E2C0B0_9PLAN (HTH tetR-type domain-containing protein n=1 Tax=Gimesia sp. TaxID=2024833 RepID=A0A2E2C0B0_9PLAN)

HSP 1 Score: 339 bits (869), Expect = 1.130e-116
Identity = 169/188 (89.89%), Postives = 175/188 (93.09%), Query Frame = 0
Query:    1 EGGVSSTRQKILEVAGQVFAEKGFDRATSKEITELANTNAASVNYYFGGLEELYKAVLHEAGSRLITTDTIRSVIEEKSNPQAKLYAFMGIFVQALTSPISSSWVLRVISRELVHPTSVAAPFKGKERVERIFILKNIVSELMGLPANHPAVERGCLSIISPCFMLLICDRPSLQEMFPNLGFTQKDA 188
            EG VS+TRQKILEVAGQVFAEKGFDRATSKEITELANTNAASVNYYFG +EELYKAVLHEA SRLITTD+IRS IE KS+P AKLY F+GIFVQALTSPISSSWVLRVISRELVHPTSV A FKGKER+ERIFILK IVSELMGLP NHPAVERGCLSII PCFMLLICDRPSLQEMFPNLGF QKDA
Sbjct:   14 EGAVSTTRQKILEVAGQVFAEKGFDRATSKEITELANTNAASVNYYFGSVEELYKAVLHEAASRLITTDSIRSTIEAKSDPHAKLYGFVGIFVQALTSPISSSWVLRVISRELVHPTSVTASFKGKERIERIFILKGIVSELMGLPVNHPAVERGCLSIIGPCFMLLICDRPSLQEMFPNLGFAQKDA 201          
BLAST of mRNA_M-pyrifera_M_contig115174.3158.1 vs. uniprot
Match: A0A517WGU9_9PLAN (Putative DNA-binding transcriptional regulator n=1 Tax=Gimesia chilikensis TaxID=2605989 RepID=A0A517WGU9_9PLAN)

HSP 1 Score: 212 bits (539), Expect = 1.710e-66
Identity = 103/188 (54.79%), Postives = 135/188 (71.81%), Query Frame = 0
Query:    1 EGGVSSTRQKILEVAGQVFAEKGFDRATSKEITELANTNAASVNYYFGGLEELYKAVLHEAGSRLITTDTIRSVIEEKSNPQAKLYAFMGIFVQALTSPISSSWVLRVISRELVHPTSVAAPFKGKERVERIFILKNIVSELMGLPANHPAVERGCLSIISPCFMLLICDRPSLQEMFPNLGFTQKDA 188
            +G  ++TRQ++LEV GQ+FAEKGFDR TSKEITE A TN+A+VNYYF G+E LY AVL EA + LI +  + + + E+ + +AKL  F+ +F+  LTSP SSSW LRV+ RE   PT V      K R+E++ +LK IVSELM LP +HP+V RGC+SI+ PCFML+ICDR +L+  FP LG    DA
Sbjct:   14 DGDSANTRQRLLEVGGQIFAEKGFDRTTSKEITEQAGTNSAAVNYYFEGIEGLYAAVLEEASNMLIKSADMEAAVAEQQDAKAKLKTFLSMFINVLTSPASSSWRLRVLIREFASPTFVDHTPHEKSRLEKMNLLKGIVSELMDLPEDHPSVGRGCISIMGPCFMLMICDRVTLKHAFPQLGLKSDDA 201          
BLAST of mRNA_M-pyrifera_M_contig115174.3158.1 vs. uniprot
Match: UPI001CD021C4 (CerR family C-terminal domain-containing protein n=1 Tax=Bremerella volcania TaxID=2527984 RepID=UPI001CD021C4)

HSP 1 Score: 210 bits (534), Expect = 1.110e-65
Identity = 102/184 (55.43%), Postives = 133/184 (72.28%), Query Frame = 0
Query:    5 SSTRQKILEVAGQVFAEKGFDRATSKEITELANTNAASVNYYFGGLEELYKAVLHEAGSRLITTDTIRSVIEEKSNPQAKLYAFMGIFVQALTSPISSSWVLRVISRELVHPTSVAAPFKGKERVERIFILKNIVSELMGLPANHPAVERGCLSIISPCFMLLICDRPSLQEMFPNLGFTQKDA 188
            +STR ++LEVAGQ+FAE GFDR TSKEITE A TN A+VNY+F  LE LY AV+ EA   L TT  +++ +EE+ + Q KL AF+G+FV+ LTSP SSSW LRV+ RE   PT V      K R++++ ILK IVSELM LP +HPAV R C+++++PCFML++CDRP+L+  FP  G    DA
Sbjct:   18 TSTRDRLLEVAGQLFAEHGFDRTTSKEITEKAGTNIAAVNYHFNSLEGLYGAVIEEATRMLATTSHMQAAVEEQGDAQDKLRAFLGVFVRVLTSPASSSWRLRVLVREFTSPTLVDQTKYKKSRLQKMNILKRIVSELMELPEDHPAVGRSCINVMAPCFMLMLCDRPTLKRSFPKFGLKSDDA 201          
BLAST of mRNA_M-pyrifera_M_contig115174.3158.1 vs. uniprot
Match: A0A255R2D5_9BACT (HTH tetR-type domain-containing protein n=2 Tax=Rhodopirellula sp. MGV TaxID=2023130 RepID=A0A255R2D5_9BACT)

HSP 1 Score: 207 bits (528), Expect = 7.980e-65
Identity = 96/184 (52.17%), Postives = 134/184 (72.83%), Query Frame = 0
Query:    5 SSTRQKILEVAGQVFAEKGFDRATSKEITELANTNAASVNYYFGGLEELYKAVLHEAGSRLITTDTIRSVIEEKSNPQAKLYAFMGIFVQALTSPISSSWVLRVISRELVHPTSVAAPFKGKERVERIFILKNIVSELMGLPANHPAVERGCLSIISPCFMLLICDRPSLQEMFPNLGFTQKDA 188
            ++TR ++LE AGQ+FAEKGFDR TSKEITELA  N ASVNY+F G+E LY AV+ EA   L+T+  ++  ++   +P  KL AF+ +FV++LTSP SSSW LR+++RE   PT    P   KER++++ ILK IV+E+ GLP  HPAV R C+++++PCF L+I DRP++++ FP LG   KDA
Sbjct:   18 TNTRMRLLEAAGQLFAEKGFDRTTSKEITELAGANVASVNYHFQGIEGLYAAVVEEASGLLVTSAQMQEAMQGHQDPNNKLEAFLRMFVRSLTSPASSSWKLRILAREFSSPTLCNQPLHKKERMQKVSILKGIVAEITGLPEEHPAVARSCINVLAPCFFLMIGDRPTIKKAFPKLGLNPKDA 201          
BLAST of mRNA_M-pyrifera_M_contig115174.3158.1 vs. uniprot
Match: A0A2W4T1B1_9PROT (DUF1956 domain-containing protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4T1B1_9PROT)

HSP 1 Score: 181 bits (460), Expect = 2.740e-54
Identity = 85/184 (46.20%), Postives = 125/184 (67.93%), Query Frame = 0
Query:    5 SSTRQKILEVAGQVFAEKGFDRATSKEITELANTNAASVNYYFGGLEELYKAVLHEAGSRLITTDTIRSVIEEKSNPQAKLYAFMGIFVQALTSPISSSWVLRVISRELVHPTSVAAPFKGKERVERIFILKNIVSELMGLPANHPAVERGCLSIISPCFMLLICDRPSLQEMFPNLGFTQKDA 188
            ++T+ ++LE AG +FAEKGFDR T+KEI E A TNAASVNY+FGG+E LY+ VL EA  R ++   + S +E + +PQ KL   + +F+ A+T P SSSW +RV++RE++ PT      + K    +  ++  +VSE++GLP  HP+V R C SI +PCF+LL+ DR  ++++FP LG    DA
Sbjct:   24 ATTKAQLLEAAGVLFAEKGFDRTTAKEIAEKAGTNAASVNYHFGGIEGLYEEVLVEAHHRFVSLQALASAVEGEGDPQQKLRRLLELFINAVTEPASSSWAVRVLTREILSPTPYFHTLRRKAIEPKKSLIFGLVSEVLGLPREHPSVARACFSIAAPCFLLLVADRHLIKQVFPALGADATDA 207          
BLAST of mRNA_M-pyrifera_M_contig115174.3158.1 vs. uniprot
Match: A0A5Q0BHP0_9GAMM (DUF1956 domain-containing protein n=1 Tax=Candidatus Methylospira mobilis TaxID=1808979 RepID=A0A5Q0BHP0_9GAMM)

HSP 1 Score: 179 bits (455), Expect = 1.090e-53
Identity = 88/181 (48.62%), Postives = 120/181 (66.30%), Query Frame = 0
Query:    7 TRQKILEVAGQVFAEKGFDRATSKEITELANTNAASVNYYFGGLEELYKAVLHEAGSRLITTDTIRSVIEEKSNPQAKLYAFMGIFVQALTSPISSSWVLRVISRELVHPTSVAAPFKGKERVERIFILKNIVSELMGLPANHPAVERGCLSIISPCFMLLICDRPSLQEMFPNLGFTQKD 187
            TR +IL V GQ+FAEKGFDR T KEI   A  N A++NYYFGG+E LY  VL EA  +L T +T+ +++  +   QAKL A +   V A T P +SSW+LRVI RE+V P+   + F  +E + +  +LK IV+EL+GLP  HP V RG   +I+PC M+LI DR +L+ ++PN GF + D
Sbjct:   23 TRSQILRVGGQLFAEKGFDRTTGKEICARAGANTAAINYYFGGMEGLYTTVLLEAHRQLFTMETLSAIVAAEVTAQAKLEAVILQLVDAFTEPSASSWMLRVIGREIVAPSPFLSFFSEQEVMPKCVMLKGIVAELVGLPEEHPVVTRGAFFVIAPCIMMLINDRETLKLLYPNFGFEKSD 203          
BLAST of mRNA_M-pyrifera_M_contig115174.3158.1 vs. uniprot
Match: A0A4D7BHX8_9HYPH (DUF1956 domain-containing protein n=1 Tax=Phreatobacter stygius TaxID=1940610 RepID=A0A4D7BHX8_9HYPH)

HSP 1 Score: 176 bits (447), Expect = 1.570e-52
Identity = 85/177 (48.02%), Postives = 125/177 (70.62%), Query Frame = 0
Query:    5 SSTRQKILEVAGQVFAEKGFDRATSKEITELANTNAASVNYYFGGLEELYKAVLHEAGSRLITTDTIRSVIEEKSNPQAKLYAFMGIFVQALTSPISSSWVLRVISRELVHPTSVAAPFKGKERVERIFILKNIVSELMGLPANHPAVERGCLSIISPCFMLLICDRPSLQEMFPNL 181
            ++TR +ILEVAG+VFAEKG DRAT KEI E A  N+A+VNYY+GG++ELY  VL EA  RL+  D + +V + +  P+ KL   +G+ V+A+  P  SSW LRV+SRE++ P+++    + +E + +  +L  +V+E++GLPA+HPAV R C+SI +P  +LLI DR  + +MFP L
Sbjct:   19 AATRLQILEVAGEVFAEKGVDRATGKEIAERAKANSAAVNYYYGGIDELYGEVLVEAHRRLVAYDVLAAVAKGEGRPEDKLRRLLGVVVKAIMGPKGSSWALRVLSREILAPSAMFHVLRERELLPKKQLLAGLVAEMLGLPADHPAVSRSCISIAAPFVVLLIGDRQVVTQMFPGL 195          
BLAST of mRNA_M-pyrifera_M_contig115174.3158.1 vs. uniprot
Match: A0A838BJL7_9HYPH (CerR family C-terminal domain-containing protein n=1 Tax=Microvirga mediterraneensis TaxID=2754695 RepID=A0A838BJL7_9HYPH)

HSP 1 Score: 171 bits (434), Expect = 2.250e-50
Identity = 80/178 (44.94%), Postives = 121/178 (67.98%), Query Frame = 0
Query:    5 SSTRQKILEVAGQVFAEKGFDRATSKEITELANTNAASVNYYFGGLEELYKAVLHEAGSRLITTDTIRSVIEEKSNPQAKLYAFMGIFVQALTSPISSSWVLRVISRELVHPTSVAAPFKGKERVERIFILKNIVSELMGLPANHPAVERGCLSIISPCFMLLICDRPSLQEMFPNLG 182
            ++T+ ++LE AG VFAEKGFDRAT+KEI E A  NAASVNYY+GG+E LY+ VL  A  R+++   + +V+   ++P+ KL   + + ++ +T P SSSW +RV++RE++ P+      + KE   +  ++  +VSEL+GLP  HP V R C+SI +PC MLL+ DR  + ++FP LG
Sbjct:   22 ATTKAQLLEAAGMVFAEKGFDRATAKEIAERAGANAASVNYYYGGIEGLYEEVLVTAHHRIVSYQALAAVMAGDADPRQKLRGLIELIIRTVTGPASSSWAVRVLTREVLAPSPYINALRQKEIEPKKLLVFGLVSELLGLPREHPIVARACVSIAAPCIMLLVADRHLVAQLFPALG 199          
BLAST of mRNA_M-pyrifera_M_contig115174.3158.1 vs. uniprot
Match: A0A5N3P9U2_9HYPH (DUF1956 domain-containing protein n=1 Tax=Microvirga brassicacearum TaxID=2580413 RepID=A0A5N3P9U2_9HYPH)

HSP 1 Score: 171 bits (432), Expect = 3.360e-50
Identity = 80/178 (44.94%), Postives = 117/178 (65.73%), Query Frame = 0
Query:    5 SSTRQKILEVAGQVFAEKGFDRATSKEITELANTNAASVNYYFGGLEELYKAVLHEAGSRLITTDTIRSVIEEKSNPQAKLYAFMGIFVQALTSPISSSWVLRVISRELVHPTSVAAPFKGKERVERIFILKNIVSELMGLPANHPAVERGCLSIISPCFMLLICDRPSLQEMFPNLG 182
            ++TR +IL+ AG+VFAEKG DR T KEI + A TN+A+VNYYFGG+  LY+ VL EA  R ++ + + ++   +   + KL +F+ + V  LT P SSSW  RV+SRE++ P+      + +E   +  ++  IV E+M LPA+HPAV  GC S++ PC MLL+ DR  L ++FP LG
Sbjct:   21 ANTRAQILQAAGEVFAEKGLDRTTGKEIADRAGTNSAAVNYYFGGVAGLYEEVLVEAHRRFVSYEALTTIATREGTAEEKLRSFIELVVTTLTGPASSSWAFRVLSREILSPSPFIEALRMRELQPKKLLISAIVGEIMDLPADHPAVASGCFSVVMPCAMLLVADRHLLTQLFPILG 198          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig115174.3158.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6I6AHN7_9PLAN5.150e-12998.94DUF1956 domain-containing protein n=2 Tax=Gimesia ... [more]
A0A2E2C0B0_9PLAN1.130e-11689.89HTH tetR-type domain-containing protein n=1 Tax=Gi... [more]
A0A517WGU9_9PLAN1.710e-6654.79Putative DNA-binding transcriptional regulator n=1... [more]
UPI001CD021C41.110e-6555.43CerR family C-terminal domain-containing protein n... [more]
A0A255R2D5_9BACT7.980e-6552.17HTH tetR-type domain-containing protein n=2 Tax=Rh... [more]
A0A2W4T1B1_9PROT2.740e-5446.20DUF1956 domain-containing protein n=1 Tax=Proteoba... [more]
A0A5Q0BHP0_9GAMM1.090e-5348.62DUF1956 domain-containing protein n=1 Tax=Candidat... [more]
A0A4D7BHX8_9HYPH1.570e-5248.02DUF1956 domain-containing protein n=1 Tax=Phreatob... [more]
A0A838BJL7_9HYPH2.250e-5044.94CerR family C-terminal domain-containing protein n... [more]
A0A5N3P9U2_9HYPH3.360e-5044.94DUF1956 domain-containing protein n=1 Tax=Microvir... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015292Transcription regulator YbiH, C-terminalPFAMPF09209TetR_C_32coord: 81..176
e-value: 2.2E-11
score: 43.8
NoneNo IPR availableGENE3D1.10.357.10coord: 4..185
e-value: 3.4E-23
score: 84.9
NoneNo IPR availablePANTHERPTHR30055HTH-TYPE TRANSCRIPTIONAL REGULATOR RUTRcoord: 5..103
IPR001647DNA-binding HTH domain, TetR-typePFAMPF00440TetR_Ncoord: 11..57
e-value: 3.3E-10
score: 39.6
IPR001647DNA-binding HTH domain, TetR-typePROSITEPS50977HTH_TETR_2coord: 5..65
score: 18.545
IPR036271Tetracyclin repressor-like, C-terminal domain superfamilySUPERFAMILY48498Tetracyclin repressor-like, C-terminal domaincoord: 78..176
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 6..66

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig115174contigM-pyrifera_M_contig115174:1..564 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig115174.3158.1mRNA_M-pyrifera_M_contig115174.3158.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig115174 1..564 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig115174.3158.1 ID=prot_M-pyrifera_M_contig115174.3158.1|Name=mRNA_M-pyrifera_M_contig115174.3158.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=188bp
EGGVSSTRQKILEVAGQVFAEKGFDRATSKEITELANTNAASVNYYFGGL
EELYKAVLHEAGSRLITTDTIRSVIEEKSNPQAKLYAFMGIFVQALTSPI
SSSWVLRVISRELVHPTSVAAPFKGKERVERIFILKNIVSELMGLPANHP
AVERGCLSIISPCFMLLICDRPSLQEMFPNLGFTQKDA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015292Tscrpt_reg_YbiH_C
IPR001647HTH_TetR
IPR036271Tet_transcr_reg_TetR-rel_C_sf
IPR009057Homeobox-like_sf