prot_M-pyrifera_M_contig115015.3121.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig115015.3121.1
Unique Name	prot_M-pyrifera_M_contig115015.3121.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	180

Homology

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BLAST of mRNA_M-pyrifera_M_contig115015.3121.1 vs. uniprot
Match: A0A2E7HN97_9BACT (Shikimate dehydrogenase (NADP(+)) n=1 Tax=Opitutae bacterium TaxID=2026771 RepID=A0A2E7HN97_9BACT)

HSP 1 Score: 273 bits (699), Expect = 4.340e-90
Identity = 133/178 (74.72%), Postives = 155/178 (87.08%), Query Frame = 0

Query:    1 ENTDGKGFVKSLRELVDPQGKRVVIFGAGGAARAICVEVALAGARQITIVNRSQARGEELVALLNANVPADADFVLWEGPYSIPEGTDIVINATSIGLFPDIDARLDLDVATLSSEMVVADVIPNPPRTQLVRDAESRGCRVIDGLGMLVNQGVIGVEYWSGIDPDPIVMRQALEAVF 178
            ENTDGKGFV SLREL DP GK+VVIFGAGGAARAI VEVALAGA  ITIVNRS  RGEEL +LL+  +PA+A+F+ WE  + IP+GTD++INATSIGLFPD+DARLDLD+ +L+SE VVADVIPNPP T LVRDA+ +GC+VIDGLGMLVNQGVIG+ +W+GIDPDP+VMR ALE VF
Sbjct:  106 ENTDGKGFVSSLRELTDPSGKKVVIFGAGGAARAIGVEVALAGASAITIVNRSSGRGEELSSLLDEKLPAEANFIPWEKTFVIPDGTDVLINATSIGLFPDLDARLDLDIESLTSETVVADVIPNPPETNLVRDAKGKGCKVIDGLGMLVNQGVIGIRHWTGIDPDPVVMRAALEEVF 283

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BLAST of mRNA_M-pyrifera_M_contig115015.3121.1 vs. uniprot
Match: A0A2D6VII9_9BACT (Shikimate dehydrogenase (NADP(+)) n=2 Tax=Opitutae bacterium TaxID=2026771 RepID=A0A2D6VII9_9BACT)

HSP 1 Score: 273 bits (698), Expect = 6.570e-90
Identity = 137/179 (76.54%), Postives = 150/179 (83.80%), Query Frame = 0

Query:    1 ENTDGKGFVKSLRELVDPQGKRVVIFGAGGAARAICVEVALAGARQITIVNRSQARGEELVALLNANVPADADFVLWEGPYSIPEGTDIVINATSIGLFPDIDARLDLDVATLSSEMVVADVIPNPPRTQLVRDAESRGCRVIDGLGMLVNQGVIGVEYWSGIDPDPIVMRQALEAVFG 179
            ENTDGKGFV SL EL DP  K+VVIFGAGGAARAI VEVALAGA  ITIVNRS  RG+EL  LL  N+P  ADF  WEG YSIPE TD+VINATSIGLFPD+DARLD D+ TL+SEMVVADVIPNPP T LVRDA  +GC+VIDGLGMLVNQGVIG+++W+GIDPDP VMR ALE VFG
Sbjct:  105 ENTDGKGFVSSLGELTDPNRKKVVIFGAGGAARAISVEVALAGASHITIVNRSVERGDELTKLLQDNLPCYADFAPWEGTYSIPEETDVVINATSIGLFPDVDARLDFDLNTLTSEMVVADVIPNPPATNLVRDAREKGCKVIDGLGMLVNQGVIGIKHWTGIDPDPSVMRAALEEVFG 283

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BLAST of mRNA_M-pyrifera_M_contig115015.3121.1 vs. uniprot
Match: A0A2E8A748_9BACT (Shikimate dehydrogenase (NADP(+)) n=1 Tax=Opitutae bacterium TaxID=2026771 RepID=A0A2E8A748_9BACT)

HSP 1 Score: 269 bits (687), Expect = 2.790e-88
Identity = 134/179 (74.86%), Postives = 149/179 (83.24%), Query Frame = 0

Query:    1 ENTDGKGFVKSLRELVDPQGKRVVIFGAGGAARAICVEVALAGARQITIVNRSQARGEELVALLNANVPADADFVLWEGPYSIPEGTDIVINATSIGLFPDIDARLDLDVATLSSEMVVADVIPNPPRTQLVRDAESRGCRVIDGLGMLVNQGVIGVEYWSGIDPDPIVMRQALEAVFG 179
            ENTDGKGFV SLREL DPQ K+VVIFGAGGAARAI VEVALAGA  ITIVNRS +RGEEL ALL   +P  ADF  WE  YSIP  T++VINATSIGLFPD+DARLD D  +L S MVVADVIPNPP T LVRDA ++GC+VIDGLGMLVNQGVIG+++W+G+DPDP VMR ALE VFG
Sbjct:  105 ENTDGKGFVSSLRELTDPQDKKVVIFGAGGAARAISVEVALAGASSITIVNRSPSRGEELTALLTDKLPCSADFASWEDTYSIPSDTEVVINATSIGLFPDLDARLDFDPDSLLSSMVVADVIPNPPVTHLVRDARAKGCKVIDGLGMLVNQGVIGIKHWTGVDPDPSVMRAALEEVFG 283

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BLAST of mRNA_M-pyrifera_M_contig115015.3121.1 vs. uniprot
Match: A0A2D8I4Q0_9BACT (Shikimate dehydrogenase (NADP(+)) n=1 Tax=Opitutae bacterium TaxID=2026771 RepID=A0A2D8I4Q0_9BACT)

HSP 1 Score: 268 bits (685), Expect = 5.610e-88
Identity = 131/179 (73.18%), Postives = 151/179 (84.36%), Query Frame = 0

Query:    1 ENTDGKGFVKSLRELVDPQGKRVVIFGAGGAARAICVEVALAGARQITIVNRSQARGEELVALLNANVPADADFVLWEGPYSIPEGTDIVINATSIGLFPDIDARLDLDVATLSSEMVVADVIPNPPRTQLVRDAESRGCRVIDGLGMLVNQGVIGVEYWSGIDPDPIVMRQALEAVFG 179
            ENTDGKGFV SLREL DP+GK+V+IFGAGGAARAI VEVALAGA  ITIVNRS  RGEEL  LLN  +P  ADFV W   ++IP  TD++INATSIGL+PD++ARLD D+ TL+S MVVADVIPNPP T LV+DA S+GC+VIDGLGMLVNQGVIGV++W+GIDPDP +MR ALE VFG
Sbjct:  105 ENTDGKGFVSSLRELTDPKGKKVIIFGAGGAARAISVEVALAGATSITIVNRSSERGEELTNLLNEKLPVTADFVSWTSTFTIPPDTDVLINATSIGLYPDLNARLDFDLETLTSNMVVADVIPNPPCTNLVKDARSKGCKVIDGLGMLVNQGVIGVKHWTGIDPDPSIMRSALEEVFG 283

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BLAST of mRNA_M-pyrifera_M_contig115015.3121.1 vs. uniprot
Match: A0A142WPU1_9PLAN (Shikimate dehydrogenase (NADP(+)) n=1 Tax=Planctomyces sp. SH-PL14 TaxID=1632864 RepID=A0A142WPU1_9PLAN)

HSP 1 Score: 268 bits (685), Expect = 5.990e-88
Identity = 136/179 (75.98%), Postives = 152/179 (84.92%), Query Frame = 0

Query:    1 ENTDGKGFVKSLRELVDPQGKRVVIFGAGGAARAICVEVALAGARQITIVNRSQARGEELVALLNANVPADADFVLWEGPYSIPEGTDIVINATSIGLFPDIDARLDLDVATLSSEMVVADVIPNPPRTQLVRDAESRGCRVIDGLGMLVNQGVIGVEYWSGIDPDPIVMRQALEAVFG 179
            ENTDGKGFVKSL+ELVDP GKR VIFGAGGAARAI VEVALAGA +ITIVNRS +RG+ELVALL   V    + V W+  Y +PEG DIVINATSIGLFPD+DARL LDV +L S MVVADVIPNPP+T+LVRDA +RGC+VIDGLGMLVNQG+IGV YWSGI+PD  VMR+ALE VFG
Sbjct:  106 ENTDGKGFVKSLKELVDPTGKRAVIFGAGGAARAIGVEVALAGATEITIVNRSPSRGKELVALLTDKVRVKTNLVAWDQDYVVPEGVDIVINATSIGLFPDVDARLALDVNSLRSGMVVADVIPNPPKTRLVRDATARGCKVIDGLGMLVNQGIIGVHYWSGIEPDAAVMRKALEDVFG 284

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BLAST of mRNA_M-pyrifera_M_contig115015.3121.1 vs. uniprot
Match: A0A2E4ZV29_9BACT (Shikimate dehydrogenase (NADP(+)) n=3 Tax=Opitutae TaxID=414999 RepID=A0A2E4ZV29_9BACT)

HSP 1 Score: 268 bits (684), Expect = 8.220e-88
Identity = 130/179 (72.63%), Postives = 152/179 (84.92%), Query Frame = 0

Query:    1 ENTDGKGFVKSLRELVDPQGKRVVIFGAGGAARAICVEVALAGARQITIVNRSQARGEELVALLNANVPADADFVLWEGPYSIPEGTDIVINATSIGLFPDIDARLDLDVATLSSEMVVADVIPNPPRTQLVRDAESRGCRVIDGLGMLVNQGVIGVEYWSGIDPDPIVMRQALEAVFG 179
            ENTDGKGFV+SLREL DP GK VVIFGAGGAARAI  EVALAGA +ITIVNR+  RGEEL  LL+  +P +ADFV WE  Y+ P+GTD++INATSIGLFPD+DARLDL+V +L   MVVADVIPNPPRT LV+DA ++GC+VIDGLGMLVNQGVIG+ +W+G+DPDP VMR ALE +FG
Sbjct:  106 ENTDGKGFVESLRELTDPTGKNVVIFGAGGAARAIGXEVALAGASKITIVNRTVERGEELTRLLDEKLPVEADFVPWESVYAAPDGTDVLINATSIGLFPDVDARLDLEVDSLREGMVVADVIPNPPRTNLVKDATAKGCKVIDGLGMLVNQGVIGIRHWTGVDPDPAVMRAALEEIFG 284

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BLAST of mRNA_M-pyrifera_M_contig115015.3121.1 vs. uniprot
Match: A0A2D7WNF9_9BACT (Shikimate dehydrogenase (NADP(+)) n=1 Tax=Opitutae bacterium TaxID=2026771 RepID=A0A2D7WNF9_9BACT)

HSP 1 Score: 264 bits (675), Expect = 1.910e-86
Identity = 131/178 (73.60%), Postives = 147/178 (82.58%), Query Frame = 0

Query:    1 ENTDGKGFVKSLRELVDPQGKRVVIFGAGGAARAICVEVALAGARQITIVNRSQARGEELVALLNANVPADADFVLWEGPYSIPEGTDIVINATSIGLFPDIDARLDLDVATLSSEMVVADVIPNPPRTQLVRDAESRGCRVIDGLGMLVNQGVIGVEYWSGIDPDPIVMRQALEAVF 178
            ENTDGKGFV SLREL DP+ K+VV+FGAGGAARAI VEVALAGA  ITIVNRS  RGEEL  LL   +P  ADF  WE  Y IP  TD+VINATSIGLFPD+ ARL+ D+ TLSSEMVVADVIPNPP T LV+DA ++GC+VIDGLGMLVNQGVIG+++W+GIDPDP VMR ALE VF
Sbjct:  106 ENTDGKGFVSSLRELTDPERKKVVVFGAGGAARAISVEVALAGANHITIVNRSTDRGEELTKLLQDKLPCYADFAPWESTYHIPADTDVVINATSIGLFPDVGARLNFDINTLSSEMVVADVIPNPPSTNLVKDARTKGCKVIDGLGMLVNQGVIGIQHWTGIDPDPTVMRAALEEVF 283

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BLAST of mRNA_M-pyrifera_M_contig115015.3121.1 vs. uniprot
Match: A0A3L7T596_9BACT (Shikimate dehydrogenase (NADP(+)) n=2 Tax=Planctomycetes TaxID=203682 RepID=A0A3L7T596_9BACT)

HSP 1 Score: 264 bits (675), Expect = 1.970e-86
Identity = 127/178 (71.35%), Postives = 152/178 (85.39%), Query Frame = 0

Query:    1 ENTDGKGFVKSLRELVDPQGKRVVIFGAGGAARAICVEVALAGARQITIVNRSQARGEELVALLNANVPADADFVLWEGPYSIPEGTDIVINATSIGLFPDIDARLDLDVATLSSEMVVADVIPNPPRTQLVRDAESRGCRVIDGLGMLVNQGVIGVEYWSGIDPDPIVMRQALEAVF 178
            ENTDGKGF++SL+EL DP+GKR+VIFGAGGAARAI VE+ALAGA   T+VNRS  RGEELV LL   V A  DFV W+G + IPEGTD+VINATSIGL+PD +ARL+LD++TL   MVVADVIPNPP T+LV+DA  +GC+VIDGLGMLVNQGVIG+++W+GIDPDP VMR+ALE +F
Sbjct:  106 ENTDGKGFLESLKELTDPKGKRIVIFGAGGAARAITVELALAGASHFTLVNRSVTRGEELVKLLREKVNAKVDFVQWKGDFKIPEGTDVVINATSIGLYPDREARLELDISTLKPSMVVADVIPNPPETRLVKDARGKGCKVIDGLGMLVNQGVIGIKHWAGIDPDPKVMRKALEDIF 283

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BLAST of mRNA_M-pyrifera_M_contig115015.3121.1 vs. uniprot
Match: A0A1Z8VIC8_9BACT (Shikimate dehydrogenase (NADP(+)) n=1 Tax=Verrucomicrobia bacterium TMED60 TaxID=1986793 RepID=A0A1Z8VIC8_9BACT)

HSP 1 Score: 260 bits (664), Expect = 8.660e-85
Identity = 132/179 (73.74%), Postives = 144/179 (80.45%), Query Frame = 0

Query:    1 ENTDGKGFVKSLRELVDPQGKRVVIFGAGGAARAICVEVALAGARQITIVNRSQARGEELVALLNANVPADADFVLWEGPYSIPEGTDIVINATSIGLFPDIDARLDLDVATLSSEMVVADVIPNPPRTQLVRDAESRGCRVIDGLGMLVNQGVIGVEYWSGIDPDPIVMRQALEAVFG 179
            ENTDGKGFV SL EL DP+GK+VV FGAGGAARAI VEVALAGA  ITIVNRS  RGEEL  LL   +P  ADF  W+  YSIP  TD+VINATSIGLFPD+DARLD D  +L S MVVADVIPNPP T LVRDA S+GC VIDGL MLVNQGVIG+++W+GIDPDP VMR ALE VFG
Sbjct:  105 ENTDGKGFVSSLXELTDPKGKKVVXFGAGGAARAISVEVALAGAHHITIVNRSVDRGEELTTLLQDKLPCYADFAPWDSTYSIPSXTDVVINATSIGLFPDLDARLDFDPDSLLSNMVVADVIPNPPTTHLVRDARSKGCPVIDGLSMLVNQGVIGIKHWTGIDPDPKVMRLALEEVFG 283

[Close]

BLAST of mRNA_M-pyrifera_M_contig115015.3121.1 vs. uniprot
Match: A0A517ZFF4_9PLAN (Shikimate dehydrogenase (NADP(+)) n=1 Tax=Maioricimonas rarisocia TaxID=2528026 RepID=A0A517ZFF4_9PLAN)

HSP 1 Score: 259 bits (663), Expect = 1.150e-84
Identity = 127/179 (70.95%), Postives = 150/179 (83.80%), Query Frame = 0

Query:    1 ENTDGKGFVKSLRELVDPQGKRVVIFGAGGAARAICVEVALAGARQITIVNRSQARGEELVALLNANVPADADFVLWEGPYSIPEGTDIVINATSIGLFPDIDARLDLDVATLSSEMVVADVIPNPPRTQLVRDAESRGCRVIDGLGMLVNQGVIGVEYWSGIDPDPIVMRQALEAVFG 179
            ENTDGKGFV+SLRE VDP GK VV+FGAGGAARAI VE ALAGA  IT+VNRS  RGEEL ALL+   PA A+FV W+G Y++P GTDIV+NATSIGLFPD+DAR+ +D+ TL+ +MVVADVIPNPPRT+LVR++E+ GC VIDGLGMLVNQGVIG++YW+  D DP VMR  LE +FG
Sbjct:  102 ENTDGKGFVESLREQVDPAGKSVVMFGAGGAARAIGVETALAGATHITVVNRSPERGEELAALLSEKTPATAEFVHWDGDYAVPTGTDIVVNATSIGLFPDVDARVPIDMETLTPQMVVADVIPNPPRTRLVRESEACGCTVIDGLGMLVNQGVIGIKYWTDQDVDPAVMRAKLEEIFG 280

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig115015.3121.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig115015.3121.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A2E7HN97_9BACT	4.340e-90	74.72	Shikimate dehydrogenase (NADP(+)) n=1 Tax=Opitutae...	[more]
A0A2D6VII9_9BACT	6.570e-90	76.54	Shikimate dehydrogenase (NADP(+)) n=2 Tax=Opitutae...	[more]
A0A2E8A748_9BACT	2.790e-88	74.86	Shikimate dehydrogenase (NADP(+)) n=1 Tax=Opitutae...	[more]
A0A2D8I4Q0_9BACT	5.610e-88	73.18	Shikimate dehydrogenase (NADP(+)) n=1 Tax=Opitutae...	[more]
A0A142WPU1_9PLAN	5.990e-88	75.98	Shikimate dehydrogenase (NADP(+)) n=1 Tax=Planctom...	[more]
A0A2E4ZV29_9BACT	8.220e-88	72.63	Shikimate dehydrogenase (NADP(+)) n=3 Tax=Opitutae...	[more]
A0A2D7WNF9_9BACT	1.910e-86	73.60	Shikimate dehydrogenase (NADP(+)) n=1 Tax=Opitutae...	[more]
A0A3L7T596_9BACT	1.970e-86	71.35	Shikimate dehydrogenase (NADP(+)) n=2 Tax=Planctom...	[more]
A0A1Z8VIC8_9BACT	8.660e-85	73.74	Shikimate dehydrogenase (NADP(+)) n=1 Tax=Verrucom...	[more]
A0A517ZFF4_9PLAN	1.150e-84	70.95	Shikimate dehydrogenase (NADP(+)) n=1 Tax=Maiorici...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.720		coord: 2..178 e-value: 4.5E-46 score: 158.6
None	No IPR available	PANTHER	PTHR21089:SF1	BIFUNCTIONAL 3-DEHYDROQUINATE DEHYDRATASE/SHIKIMATE DEHYDROGENASE, CHLOROPLASTIC	coord: 2..175
None	No IPR available	PANTHER	PTHR21089	SHIKIMATE DEHYDROGENASE	coord: 2..175
IPR041121	SDH, C-terminal	PFAM	PF18317	SDH_C	coord: 145..175 e-value: 5.9E-10 score: 38.7
IPR006151	Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase	PFAM	PF01488	Shikimate_DH	coord: 18..67 e-value: 5.0E-7 score: 29.9
IPR036291	NAD(P)-binding domain superfamily	SUPERFAMILY	51735	NAD(P)-binding Rossmann-fold domains	coord: 4..176

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig115015	contig	M-pyrifera_M_contig115015:3..542 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig115015.3121.1	mRNA_M-pyrifera_M_contig115015.3121.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig115015 3..542 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig115015.3121.1 ID=prot_M-pyrifera_M_contig115015.3121.1|Name=mRNA_M-pyrifera_M_contig115015.3121.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=180bp
ENTDGKGFVKSLRELVDPQGKRVVIFGAGGAARAICVEVALAGARQITIV
NRSQARGEELVALLNANVPADADFVLWEGPYSIPEGTDIVINATSIGLFP
DIDARLDLDVATLSSEMVVADVIPNPPRTQLVRDAESRGCRVIDGLGMLV
NQGVIGVEYWSGIDPDPIVMRQALEAVFG*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR041121	SDH_C
IPR006151	Shikm_DH/Glu-tRNA_Rdtase
IPR036291	NAD(P)-bd_dom_sf