prot_M-pyrifera_M_contig11494.3100.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig11494.3100.1
Unique Nameprot_M-pyrifera_M_contig11494.3100.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length93
Homology
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BLAST of mRNA_M-pyrifera_M_contig11494.3100.1 vs. uniprot
Match: D7G096_ECTSI (Ubiquitin-conjugating enzyme type E2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G096_ECTSI)

HSP 1 Score: 179 bits (454), Expect = 2.530e-54
Identity = 82/93 (88.17%), Postives = 86/93 (92.47%), Query Frame = 0 
Query:    1 MMSDFEVHIPDESSMHDFLVAFPGPEDTPYTGGIWKVHVTLPKEYPFKSPSIGFENRMFHPNVDEMSGSVCLDVINQTWSPMFGASYVALMFV 93
            MMSDFEVHIPDESSMHDFLVAFPGPEDTPY GG+WKVHVTLPKEYPFKSPSIGFENRMFHPNVDEMSGSVCLDVINQTWSPMF    +  +F+
Sbjct:   18 MMSDFEVHIPDESSMHDFLVAFPGPEDTPYQGGVWKVHVTLPKEYPFKSPSIGFENRMFHPNVDEMSGSVCLDVINQTWSPMFDLVNIFKLFI 110
[Close]
BLAST of mRNA_M-pyrifera_M_contig11494.3100.1 vs. uniprot
Match: A0A835Z4W6_9STRA (Ubiquitin-conjugating enzyme/RWD-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4W6_9STRA)

HSP 1 Score: 161 bits (408), Expect = 2.720e-48
Identity = 71/93 (76.34%), Postives = 83/93 (89.25%), Query Frame = 0 
Query:    1 MMSDFEVHIPDESSMHDFLVAFPGPEDTPYTGGIWKVHVTLPKEYPFKSPSIGFENRMFHPNVDEMSGSVCLDVINQTWSPMFGASYVALMFV 93
            MMSDF VHIPDE SMHDF+VAFPGP +TPY GG+WKVHV+LP+EYP++SPSIGFENR++HPNVDEMSGSVCLDVINQTWSPMF    +  +F+
Sbjct:   16 MMSDFAVHIPDECSMHDFMVAFPGPANTPYEGGVWKVHVSLPREYPYRSPSIGFENRIYHPNVDEMSGSVCLDVINQTWSPMFDLVNIFTIFL 108
[Close]
BLAST of mRNA_M-pyrifera_M_contig11494.3100.1 vs. uniprot
Match: A0A7S2AI11_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AI11_9STRA)

HSP 1 Score: 156 bits (394), Expect = 1.670e-47
Identity = 70/93 (75.27%), Postives = 80/93 (86.02%), Query Frame = 0 
Query:    1 MMSDFEVHIPDESSMHDFLVAFPGPEDTPYTGGIWKVHVTLPKEYPFKSPSIGFENRMFHPNVDEMSGSVCLDVINQTWSPMFGASYVALMFV 93
            MMSD+EV+IPDESSMHDF V F GP DTPY GG+WK+HVTLP  YPFKSPSIGF+NRMFHPNVD++SGSVCLDVINQTWSPMF    +  +F+
Sbjct:   19 MMSDYEVNIPDESSMHDFFVKFEGPPDTPYEGGVWKIHVTLPPAYPFKSPSIGFKNRMFHPNVDDISGSVCLDVINQTWSPMFNLVNIFEVFL 111
[Close]
BLAST of mRNA_M-pyrifera_M_contig11494.3100.1 vs. uniprot
Match: A0A7S2AI60_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AI60_9STRA)

HSP 1 Score: 156 bits (394), Expect = 2.260e-46
Identity = 70/93 (75.27%), Postives = 80/93 (86.02%), Query Frame = 0 
Query:    1 MMSDFEVHIPDESSMHDFLVAFPGPEDTPYTGGIWKVHVTLPKEYPFKSPSIGFENRMFHPNVDEMSGSVCLDVINQTWSPMFGASYVALMFV 93
            MMSD+EV+IPDESSMHDF V F GP DTPY GG+WK+HVTLP  YPFKSPSIGF+NRMFHPNVD++SGSVCLDVINQTWSPMF    +  +F+
Sbjct:   19 MMSDYEVNIPDESSMHDFFVKFEGPPDTPYEGGVWKIHVTLPPAYPFKSPSIGFKNRMFHPNVDDISGSVCLDVINQTWSPMFNLVNIFEVFL 111
[Close]
BLAST of mRNA_M-pyrifera_M_contig11494.3100.1 vs. uniprot
Match: A0A7S2W0L0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W0L0_9STRA)

HSP 1 Score: 148 bits (374), Expect = 4.810e-43
Identity = 64/93 (68.82%), Postives = 80/93 (86.02%), Query Frame = 0 
Query:    1 MMSDFEVHIPDESSMHDFLVAFPGPEDTPYTGGIWKVHVTLPKEYPFKSPSIGFENRMFHPNVDEMSGSVCLDVINQTWSPMFGASYVALMFV 93
            MMSD+EVHIP+E S+H+F V F GP +TPY GG+WKVHV LP++YPFKSPSIGF+NR++HPNVD++SGSVCLDVINQTWSPMF    +  +F+
Sbjct:   31 MMSDYEVHIPNEQSVHEFFVKFHGPAETPYEGGVWKVHVMLPRDYPFKSPSIGFKNRIYHPNVDDLSGSVCLDVINQTWSPMFNLVNIFEIFL 123
[Close]
BLAST of mRNA_M-pyrifera_M_contig11494.3100.1 vs. uniprot
Match: A0A2D4C6N9_PYTIN (Ubiquitin-conjugating enzyme E2, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C6N9_PYTIN)

HSP 1 Score: 146 bits (368), Expect = 6.840e-43
Identity = 65/93 (69.89%), Postives = 79/93 (84.95%), Query Frame = 0 
Query:    1 MMSDFEVHIPDESSMHDFLVAFPGPEDTPYTGGIWKVHVTLPKEYPFKSPSIGFENRMFHPNVDEMSGSVCLDVINQTWSPMFGASYVALMFV 93
            MMS+++VH+ DES  +DF V F GP+DTPY GG+WK+HV+LPKEYPFKSPSIGF NR++HPNVD+MSGSVCLDVINQTWSPMF    +  MF+
Sbjct:   15 MMSNYDVHLTDESRANDFHVKFHGPKDTPYEGGLWKIHVSLPKEYPFKSPSIGFVNRIYHPNVDDMSGSVCLDVINQTWSPMFDLLNIFDMFI 107
[Close]
BLAST of mRNA_M-pyrifera_M_contig11494.3100.1 vs. uniprot
Match: A0A7S2BA17_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BA17_9STRA)

HSP 1 Score: 147 bits (372), Expect = 3.390e-42
Identity = 66/83 (79.52%), Postives = 73/83 (87.95%), Query Frame = 0 
Query:    1 MMSDFEVHIPDESSMHDFLVAFPGPEDTPYTGGIWKVHVTLPKEYPFKSPSIGFENRMFHPNVDEMSGSVCLDVINQTWSPMF 83
            MMSD+EV IPDES MHDF V F GP +TPY  G WK+HVTLP +YPFKSPSIGF+NRMFHPNVD++SGSVCLDVINQTWSPMF
Sbjct:   78 MMSDYEVLIPDESCMHDFFVKFDGPAETPYENGSWKIHVTLPADYPFKSPSIGFKNRMFHPNVDDISGSVCLDVINQTWSPMF 160
[Close]
BLAST of mRNA_M-pyrifera_M_contig11494.3100.1 vs. uniprot
Match: A0A7S3XS74_HETAK (Hypothetical protein n=4 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XS74_HETAK)

HSP 1 Score: 146 bits (368), Expect = 2.120e-41
Identity = 65/83 (78.31%), Postives = 73/83 (87.95%), Query Frame = 0 
Query:    1 MMSDFEVHIPDESSMHDFLVAFPGPEDTPYTGGIWKVHVTLPKEYPFKSPSIGFENRMFHPNVDEMSGSVCLDVINQTWSPMF 83
            MMSD+EV +PDE  ++DF VAF GPE TPY GG+W VHVTLP EYP+KSPSIGF NR+FHPNVD+MSGSVCLDVINQTWSPMF
Sbjct:   96 MMSDYEVTLPDEDKIYDFHVAFHGPEKTPYEGGVWDVHVTLPPEYPYKSPSIGFSNRLFHPNVDDMSGSVCLDVINQTWSPMF 178
[Close]
BLAST of mRNA_M-pyrifera_M_contig11494.3100.1 vs. uniprot
Match: A0A8K1C4X5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C4X5_PYTOL)

HSP 1 Score: 142 bits (358), Expect = 2.330e-41
Identity = 64/93 (68.82%), Postives = 77/93 (82.80%), Query Frame = 0 
Query:    1 MMSDFEVHIPDESSMHDFLVAFPGPEDTPYTGGIWKVHVTLPKEYPFKSPSIGFENRMFHPNVDEMSGSVCLDVINQTWSPMFGASYVALMFV 93
            MMSD+EV + DE+  +DF V F GP +TPY GG+WK+HV+LPKEYPFKSPSIGF NR++HPNVD+MSGSVCLDVINQTWSPMF    V  +F+
Sbjct:   16 MMSDYEVQLTDETKTNDFHVKFHGPAETPYEGGVWKIHVSLPKEYPFKSPSIGFVNRIYHPNVDDMSGSVCLDVINQTWSPMFELVNVFEVFI 108
[Close]
BLAST of mRNA_M-pyrifera_M_contig11494.3100.1 vs. uniprot
Match: H3G861_PHYRM (UBC core domain-containing protein n=31 Tax=Peronosporaceae TaxID=4777 RepID=H3G861_PHYRM)

HSP 1 Score: 140 bits (353), Expect = 1.300e-40
Identity = 62/83 (74.70%), Postives = 71/83 (85.54%), Query Frame = 0 
Query:    1 MMSDFEVHIPDESSMHDFLVAFPGPEDTPYTGGIWKVHVTLPKEYPFKSPSIGFENRMFHPNVDEMSGSVCLDVINQTWSPMF 83
            MMSD+EVH+ DE+   D  + F GP+DTPY GG WK+HVTLPK+YPFKSPSIGF NR++HPNVDE SGSVCLDVINQTWSPMF
Sbjct:   16 MMSDYEVHLTDETKTSDLDIKFNGPKDTPYEGGSWKIHVTLPKDYPFKSPSIGFMNRIYHPNVDETSGSVCLDVINQTWSPMF 98
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig11494.3100.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G096_ECTSI2.530e-5488.17Ubiquitin-conjugating enzyme type E2 n=1 Tax=Ectoc... [more]
A0A835Z4W6_9STRA2.720e-4876.34Ubiquitin-conjugating enzyme/RWD-like protein n=1 ... [more]
A0A7S2AI11_9STRA1.670e-4775.27Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A7S2AI60_9STRA2.260e-4675.27Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2W0L0_9STRA4.810e-4368.82Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A2D4C6N9_PYTIN6.840e-4369.89Ubiquitin-conjugating enzyme E2, putative n=1 Tax=... [more]
A0A7S2BA17_9STRA3.390e-4279.52Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S3XS74_HETAK2.120e-4178.31Hypothetical protein n=4 Tax=Heterosigma akashiwo ... [more]
A0A8K1C4X5_PYTOL2.330e-4168.82Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
H3G861_PHYRM1.300e-4074.70UBC core domain-containing protein n=31 Tax=Perono... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00212ubc_7coord: 1..90
e-value: 3.5E-4
score: 23.0
NoneNo IPR availablePANTHERPTHR24068FAMILY NOT NAMEDcoord: 13..85
NoneNo IPR availablePANTHERPTHR24068:SF288coord: 13..85
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 3..87
e-value: 1.3E-26
score: 92.9
IPR000608Ubiquitin-conjugating enzyme E2PROSITEPS50127UBIQUITIN_CONJUGAT_2coord: 11..93
score: 25.172
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3D3.10.110.10coord: 1..93
e-value: 7.1E-33
score: 115.2
IPR016135Ubiquitin-conjugating enzyme/RWD-likeSUPERFAMILY54495UBC-likecoord: 8..88
IPR023313Ubiquitin-conjugating enzyme, active sitePROSITEPS00183UBIQUITIN_CONJUGAT_1coord: 59..75

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig11494contigM-pyrifera_M_contig11494:6410..7401 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig11494.3100.1mRNA_M-pyrifera_M_contig11494.3100.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig11494 6410..7401 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig11494.3100.1 ID=prot_M-pyrifera_M_contig11494.3100.1|Name=mRNA_M-pyrifera_M_contig11494.3100.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=93bp
MMSDFEVHIPDESSMHDFLVAFPGPEDTPYTGGIWKVHVTLPKEYPFKSP
SIGFENRMFHPNVDEMSGSVCLDVINQTWSPMFGASYVALMFV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000608UBQ-conjugat_E2
IPR016135UBQ-conjugating_enzyme/RWD
IPR023313UBQ-conjugating_AS