prot_M-pyrifera_M_contig114809.3079.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig114809.3079.1
Unique Nameprot_M-pyrifera_M_contig114809.3079.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length78
Homology
BLAST of mRNA_M-pyrifera_M_contig114809.3079.1 vs. uniprot
Match: A0A7S4IDL8_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4IDL8_9EUKA)

HSP 1 Score: 132 bits (331), Expect = 7.800e-38
Identity = 57/75 (76.00%), Postives = 65/75 (86.67%), Query Frame = 0
Query:    4 RLCRDYIEGLVWVMKYYYQGCASWTWFYPHHYAPFSSDLVQLASLHYEFGPSQPFRPYEQLMGVLPALSGHALPE 78
            ++CRDY EGL WVMKYYYQGCASWTWFYPHHYAPF+SDLV L  L ++F   +PFRP+EQLMGVLPALSG ALP+
Sbjct:   25 QICRDYTEGLCWVMKYYYQGCASWTWFYPHHYAPFASDLVNLKDLEFDFKKGKPFRPFEQLMGVLPALSGDALPK 99          
BLAST of mRNA_M-pyrifera_M_contig114809.3079.1 vs. uniprot
Match: A0A8H4IVT6_9PEZI (5'-3' exoribonuclease n=1 Tax=Botryosphaeria dothidea TaxID=55169 RepID=A0A8H4IVT6_9PEZI)

HSP 1 Score: 120 bits (300), Expect = 7.660e-30
Identity = 49/76 (64.47%), Postives = 61/76 (80.26%), Query Frame = 0
Query:    3 YRLCRDYIEGLVWVMKYYYQGCASWTWFYPHHYAPFSSDLVQLASLHYEFGPSQPFRPYEQLMGVLPALSGHALPE 78
            +++ RDY+EGL WV+ YY+QGC SWTW+YPHHYAPF+ D V L S+  +F   QPFRPYEQLMGVLPA S HA+P+
Sbjct:  627 HKVARDYVEGLAWVLLYYFQGCPSWTWYYPHHYAPFAQDFVDLGSMELKFEKGQPFRPYEQLMGVLPAASNHAIPK 702          
BLAST of mRNA_M-pyrifera_M_contig114809.3079.1 vs. uniprot
Match: R1ER45_BOTPV (5'-3' exoribonuclease n=1 Tax=Botryosphaeria parva (strain UCR-NP2) TaxID=1287680 RepID=R1ER45_BOTPV)

HSP 1 Score: 119 bits (297), Expect = 1.950e-29
Identity = 49/76 (64.47%), Postives = 60/76 (78.95%), Query Frame = 0
Query:    3 YRLCRDYIEGLVWVMKYYYQGCASWTWFYPHHYAPFSSDLVQLASLHYEFGPSQPFRPYEQLMGVLPALSGHALPE 78
            +++ RDY+EGL WV+ YY+QGC SWTW+YPHHYAPF+ D V L  +  +F   QPFRPYEQLMGVLPA S HA+PE
Sbjct:  625 HQVARDYVEGLAWVLLYYFQGCPSWTWYYPHHYAPFAQDFVDLDKMELKFEKGQPFRPYEQLMGVLPAASNHAIPE 700          
BLAST of mRNA_M-pyrifera_M_contig114809.3079.1 vs. uniprot
Match: K2R094_MACPH (5'-3' exoribonuclease n=1 Tax=Macrophomina phaseolina (strain MS6) TaxID=1126212 RepID=K2R094_MACPH)

HSP 1 Score: 118 bits (295), Expect = 3.620e-29
Identity = 49/76 (64.47%), Postives = 59/76 (77.63%), Query Frame = 0
Query:    3 YRLCRDYIEGLVWVMKYYYQGCASWTWFYPHHYAPFSSDLVQLASLHYEFGPSQPFRPYEQLMGVLPALSGHALPE 78
            +++ RDY EGL WV+ YY+QGC SWTW+YPHHYAPF+ D V L  +  +F   QPFRPYEQLMGVLPA S HA+PE
Sbjct:  631 HQVARDYAEGLAWVLLYYFQGCPSWTWYYPHHYAPFAQDFVDLGKMELKFEKGQPFRPYEQLMGVLPAASNHAIPE 706          
BLAST of mRNA_M-pyrifera_M_contig114809.3079.1 vs. uniprot
Match: UPI001D05AE70 (uncharacterized protein n=1 Tax=Bacidia gigantensis TaxID=2732470 RepID=UPI001D05AE70)

HSP 1 Score: 116 bits (290), Expect = 1.710e-28
Identity = 47/75 (62.67%), Postives = 60/75 (80.00%), Query Frame = 0
Query:    4 RLCRDYIEGLVWVMKYYYQGCASWTWFYPHHYAPFSSDLVQLASLHYEFGPSQPFRPYEQLMGVLPALSGHALPE 78
            ++ RDY+EGL WV+ YY QGC SWTW+YPHHYAPF++D V L+ +  EF   +PF+P+EQLMGVLPA S HA+PE
Sbjct:  629 QVARDYVEGLAWVLLYYLQGCPSWTWYYPHHYAPFAADFVDLSDMKIEFSKGKPFKPFEQLMGVLPAASNHAIPE 703          
BLAST of mRNA_M-pyrifera_M_contig114809.3079.1 vs. uniprot
Match: A0A232LWG5_9EURO (5'-3' exoribonuclease n=1 Tax=Elaphomyces granulatus TaxID=519963 RepID=A0A232LWG5_9EURO)

HSP 1 Score: 115 bits (289), Expect = 2.340e-28
Identity = 47/76 (61.84%), Postives = 62/76 (81.58%), Query Frame = 0
Query:    3 YRLCRDYIEGLVWVMKYYYQGCASWTWFYPHHYAPFSSDLVQLASLHYEFGPSQPFRPYEQLMGVLPALSGHALPE 78
            + + R Y+EGL WV+ YY+QGC+SWTWFYPHHYAPF++D V +++L + F   +PFRP+EQLMGVLPA S HA+PE
Sbjct:  610 HNVARAYVEGLQWVLLYYFQGCSSWTWFYPHHYAPFAADFVDISNLDFRFEKGKPFRPFEQLMGVLPASSNHAIPE 685          
BLAST of mRNA_M-pyrifera_M_contig114809.3079.1 vs. uniprot
Match: A0A2V0PGL9_9CHLO (Exoribonuclease n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0PGL9_9CHLO)

HSP 1 Score: 115 bits (288), Expect = 3.220e-28
Identity = 49/74 (66.22%), Postives = 58/74 (78.38%), Query Frame = 0
Query:    5 LCRDYIEGLVWVMKYYYQGCASWTWFYPHHYAPFSSDLVQLASLHYEFGPSQPFRPYEQLMGVLPALSGHALPE 78
            + R YIEGLVWVM+YYY G ASW W+YP+HYAPF+SDLV +  L  EF P +PF+P+ QLMGVLPA S H LPE
Sbjct:  812 IVRSYIEGLVWVMRYYYDGVASWNWYYPYHYAPFASDLVNIGGLEIEFDPGRPFKPFNQLMGVLPARSSHCLPE 885          
BLAST of mRNA_M-pyrifera_M_contig114809.3079.1 vs. uniprot
Match: A0A4S9XN90_AURPU (5'-3' exoribonuclease n=6 Tax=Aureobasidium pullulans TaxID=5580 RepID=A0A4S9XN90_AURPU)

HSP 1 Score: 115 bits (287), Expect = 4.330e-28
Identity = 47/71 (66.20%), Postives = 57/71 (80.28%), Query Frame = 0
Query:    7 RDYIEGLVWVMKYYYQGCASWTWFYPHHYAPFSSDLVQLASLHYEFGPSQPFRPYEQLMGVLPALSGHALP 77
            RDY+EGL WV+ YY+QGCASWTW+YPHHYAPF++D V L  +  +F   +PFRPYEQLMGV+PA S H LP
Sbjct:  596 RDYVEGLAWVLLYYFQGCASWTWYYPHHYAPFAADFVDLKDMKLDFQKGKPFRPYEQLMGVMPARSNHVLP 666          
BLAST of mRNA_M-pyrifera_M_contig114809.3079.1 vs. uniprot
Match: A0A4S8XTM1_AURPU (5'-3' exoribonuclease n=31 Tax=Aureobasidium pullulans TaxID=5580 RepID=A0A4S8XTM1_AURPU)

HSP 1 Score: 115 bits (287), Expect = 4.360e-28
Identity = 47/71 (66.20%), Postives = 57/71 (80.28%), Query Frame = 0
Query:    7 RDYIEGLVWVMKYYYQGCASWTWFYPHHYAPFSSDLVQLASLHYEFGPSQPFRPYEQLMGVLPALSGHALP 77
            RDY+EGL WV+ YY+QGCASWTW+YPHHYAPF++D V L  +  +F   +PFRPYEQLMGV+PA S H LP
Sbjct:  610 RDYVEGLAWVLLYYFQGCASWTWYYPHHYAPFAADFVDLKDMKLDFQKGKPFRPYEQLMGVMPARSNHVLP 680          
BLAST of mRNA_M-pyrifera_M_contig114809.3079.1 vs. uniprot
Match: R4XBL5_TAPDE (5'-3' exoribonuclease n=1 Tax=Taphrina deformans (strain PYCC 5710 / ATCC 11124 / CBS 356.35 / IMI 108563 / JCM 9778 / NBRC 8474) TaxID=1097556 RepID=R4XBL5_TAPDE)

HSP 1 Score: 114 bits (285), Expect = 8.110e-28
Identity = 47/74 (63.51%), Postives = 57/74 (77.03%), Query Frame = 0
Query:    5 LCRDYIEGLVWVMKYYYQGCASWTWFYPHHYAPFSSDLVQLASLHYEFGPSQPFRPYEQLMGVLPALSGHALPE 78
            + RDY+EGL WV+ YYYQGC SWTWFYPHHYAPF+SD  Q++S+   F   +P RPYEQL+GV+P  S H LPE
Sbjct:  601 VARDYVEGLAWVLLYYYQGCHSWTWFYPHHYAPFASDFDQMSSMTINFSKGEPARPYEQLLGVMPVASNHVLPE 674          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig114809.3079.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S4IDL8_9EUKA7.800e-3876.00Hypothetical protein (Fragment) n=1 Tax=Vannella s... [more]
A0A8H4IVT6_9PEZI7.660e-3064.475'-3' exoribonuclease n=1 Tax=Botryosphaeria dothi... [more]
R1ER45_BOTPV1.950e-2964.475'-3' exoribonuclease n=1 Tax=Botryosphaeria parva... [more]
K2R094_MACPH3.620e-2964.475'-3' exoribonuclease n=1 Tax=Macrophomina phaseol... [more]
UPI001D05AE701.710e-2862.67uncharacterized protein n=1 Tax=Bacidia gigantensi... [more]
A0A232LWG5_9EURO2.340e-2861.845'-3' exoribonuclease n=1 Tax=Elaphomyces granulat... [more]
A0A2V0PGL9_9CHLO3.220e-2866.22Exoribonuclease n=1 Tax=Raphidocelis subcapitata T... [more]
A0A4S9XN90_AURPU4.330e-2866.205'-3' exoribonuclease n=6 Tax=Aureobasidium pullul... [more]
A0A4S8XTM1_AURPU4.360e-2866.205'-3' exoribonuclease n=31 Tax=Aureobasidium pullu... [more]
R4XBL5_TAPDE8.110e-2863.515'-3' exoribonuclease n=1 Tax=Taphrina deformans (... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR041412Xrn1, helical domainPFAMPF17846XRN_Mcoord: 4..78
e-value: 6.3E-36
score: 124.3
IPR0270735'-3' exoribonucleasePANTHERPTHR123415'->3' EXORIBONUCLEASEcoord: 8..78
NoneNo IPR availablePANTHERPTHR12341:SF415'-3' EXORIBONUCLEASE 2coord: 8..78

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig114809contigM-pyrifera_M_contig114809:335..568 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig114809.3079.1mRNA_M-pyrifera_M_contig114809.3079.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig114809 335..568 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig114809.3079.1 ID=prot_M-pyrifera_M_contig114809.3079.1|Name=mRNA_M-pyrifera_M_contig114809.3079.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=78bp
PWYRLCRDYIEGLVWVMKYYYQGCASWTWFYPHHYAPFSSDLVQLASLHY
EFGPSQPFRPYEQLMGVLPALSGHALPE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR041412Xrn1_helical
IPR0270735_3_exoribonuclease