prot_M-pyrifera_M_contig1148.3075.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig1148.3075.1
Unique Nameprot_M-pyrifera_M_contig1148.3075.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length887
Homology
BLAST of mRNA_M-pyrifera_M_contig1148.3075.1 vs. uniprot
Match: D8LQ17_ECTSI (Katanin p80 WD40 repeat-containing subunit B1 homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ17_ECTSI)

HSP 1 Score: 450 bits (1158), Expect = 3.480e-140
Identity = 429/947 (45.30%), Postives = 477/947 (50.37%), Query Frame = 0
Query:   24 TDVQFSPDGYILASAAADGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEFMELFCTTAPDTCQTRQGEKTLIWAIIFDPDGQNMFCASPSGLRRWTWDNDTSTTKLGAMGDVAWGKVGAGALHYNVDGQQLLAASCAGSRVSVWAVDFDTDLPPPGRQEPPHLPGEHGVNPFGSRGSTRSHGPLAAAASILAAGPSASALTSGTXXXXXXXXMTMATGQDTAVSLLSVVATGSDSAGRDRGGLGKGSEDASGKVGHQAERARDSKLGEDKEHVEGSAGSLAFQVLGRHLPL-STAADEKASSPAATPGAALVTAPINSGTADASEAGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDAVASVSSSGRHRSIGTSISDTLVIS----SSSRDSGVGCRG-------------DDGGSINLAEGGGQQPDVWPERAPGKEDG-GVAGEQGAAAXXXXXXXGGRLAGNGV------EHKWHKRVTGS------SACDAAG-EKLGYWVGSGKGGV-RGDGALSIQDAGRA------AAAQGAASSATPSDLMINPWPQPSRGGGGYRHALDGVEARGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDSRE--------EKPVGVVARSIA-GFPTSSTPGGGGGLDVTPGLNPAG--------------------------GSREGDVWIAD----------DGREGVRGELGMTRPRTATRRWDRPGPPGEDELIAQTLLSRASVTSSLSHRLTHLRVLRSSWADGDISGTISRLVRLENSATNSDASPRAVVSDFLWVVPLDGARVTLEHCLELMPLLEDLWKLDADSSVAAGTRCLESVVRRFGGFVRSTLGASVAAGRVDLAREERMDRCREAHRAFIRGYRHLERAEREFYEDRRIAAVARRLRPLFESYFMS 886
            TDVQFSPDG+ILASAA    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX EFMELFC TAPDTC TR        AI FDPDGQ M+CASPSGLRRW+WDNDT++ +L AMGDV WGKVGAGALHYN DGQQ                      P  G   P             SR   RSH                                                                 S D+   +  +A    D             AG  AFQVLGR + L  TAA+EK  S +   G A       SG       G                         XXXXXXXXX DDAVASV+ S RHRS+GTSISDTLVI+    +   D   G R              DDGG+                   G++ G GVA   G  A       GG             E KWHKRV G+      +A D  G E+ G   G G GG  RG      ++A R       AA  G +S  TP    +NPWP+ SR   G R      E  GG                                  SR         EK   VV RS A GFP ++  G                                         GS    + +AD                  ELGMTRPRTATRRWDRPGPPG+DE+IA+TLLSRA+ TS+LS+RLTHLR+LR  WADGD+SGTIS+L RLE SAT +D SPR VV+DFLWVVPLDG RVTL+HCLELMPLLE LWKLDA S VAA TRCLES+VRRFGGF+R TL A VAAGRVDLARE+R+ RCREAHRAFIRGY HLER+E EFYEDRRIAAVA RLRPLFESYFMS
Sbjct:  156 TDVQFSPDGHILASAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEFMELFCPTAPDTCPTR--------AITFDPDGQKMYCASPSGLRRWSWDNDTASARLEAMGDVPWGKVGAGALHYNADGQQQ-------------------SRPSRGNTFP------------ASRDGQRSH-----------------------------------------------------------------SRDSKPTMEKEASGGDDGSXXXXCXXXXXXAGMPAFQVLGRQVVLLPTAAEEKVRSSSPLGGPAATPXXXXSGVT----VGGPSSAVGGRLQNRHAARAEAVAATVXXXXXXXXXTDDAVASVAGSIRHRSVGTSISDTLVIADGGTADQADDRAGGREHRPAAWSEPAPGKDDGGNY------------------GRDSGRGVAAALGVVAAGDRHRLGGERRXXXXXXXXXDECKWHKRVAGAFAGVEGTADDEKGVERRGDSGGDGSGGKNRGKRTADEKEARREEDGTDRAANAGVSSGVTPR-FTVNPWPKDSRVEAGGRIR---TEVPGGGQDSPPLLGSPEPAPAAASNPARSKNEPPSFPSSSRRSPDRPQPREKTHAVVTRSSAVGFPITTADGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSEPEGLSVADIFGXXXXXXXXXXXXXXDELGMTRPRTATRRWDRPGPPGDDEVIAKTLLSRATATSTLSNRLTHLRMLRYGWADGDVSGTISKLTRLERSATVADDSPRTVVADFLWVVPLDGTRVTLDHCLELMPLLEGLWKLDAGSCVAAATRCLESIVRRFGGFIRDTLAAPVAAGRVDLAREDRIARCREAHRAFIRGYHHLERSEGEFYEDRRIAAVAERLRPLFESYFMS 972          
BLAST of mRNA_M-pyrifera_M_contig1148.3075.1 vs. uniprot
Match: A0A6H5K3J5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3J5_9PHAE)

HSP 1 Score: 380 bits (975), Expect = 1.060e-113
Identity = 388/967 (40.12%), Postives = 453/967 (46.85%), Query Frame = 0
Query:    2 VKLWNVETKQCAMGFKGH----------------------NAEITDVQFSPDGYILASAAADGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEFMELFCTTAPDTCQTRQGEKTLIWAIIFDPDGQNMFCASPSGLRRWTWDNDTSTTKLGAMGDVAWGKVGAGALHYNVDGQQLLAASCAGSRVSVWAVDFDTDLPPPGRQEPPHLPGEHGVNPFGSRGSTRSHGPLAAAASILAAGPSASALTSGTXXXXXXXXMTMATGQDTAVSLLSVVATGSDSAGR------DRGGLGKGSEDASGKVGHQAERARDSKLGEDKEHVEGSAGSL--------------AFQVLGRHLPL-STAADEKA--SSPAATPGAALVTAPINSGTADASEAGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDAVASVSSSGRHRSIGTSISDTLVISSSSRDSGVGCRGDDGGSINLAEGGGQQPDVWPERAPGKEDGG---------VAGEQGAAAXXXXXXXGGRL-----AGNGVEHKWHKRVTGS------SACDAAG-EKLGYWVGSGKGG-VRGDGALSIQDAGRAA-----AAQGAASSATPSDLMINPWPQPS--RGGGGYRHALDGVEARGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDSRE-------EKPVGVVARSIA-GFPTSSTPGGGGG---------------------------LDVTPGLNPAGGSREGDVWIADDGREGVRG--ELGMTRPRTATRRWDRPGPPGEDELIAQTLLSRASVTSSLSHRLTHLRVLRSSWADGDISGTISRLVRLENSATNSDASPRAVVSDFLWVVPLDGARVTLEHCLELMPLLEDLWKLDADSS----------VAAGTRCLESVVRRFGGFVRSTLGASVAAGRVDLAREERMDRCREAHR 847
            VKL+++   +    F+GH                      + ++TDVQFSPDG+ILASAAADGQ                         XXXXXXXXXXXXXXXXXXXXXX EFMELFC TAPDTC TR        AI FDPDGQ M+CASPSGLRRW+WDN  ++ +L AMGDV WGKVGAGALHYN DGQQ      A    S  +   DT                       +RG+T                                   T AT   +  SL +      D+  +       RG     S D       Q   +RDSK   +KE   G  GS               AFQVLGR + L  TAA+EKA  SSP                    + AG                XXXXXXXXXXXX       DDAVASV+ S RHRS+GTSISDTLVI+        GC  D   + + A G   +P  W E APGK+DGG         VA   G  A        G       A +G E KWHKRV G+      +A D  G E+     G G GG  RG G    ++A R       AA     S   S + ++PWP+ S     G  R  + G    GG                                   R        +K   VV RS A GFP ++  G   G                                G  P G S   D++    G  G  G  ELGMTRPRTATRRWDRPGPPGEDE+IA+TLLSRA+ TS+LS+R          WADGD+SGTIS+L RLE SAT +D SPR VV+DFLWVVPLDG RVTL+HCLELMPLLE LWK+    +          VAA TRCLES+VRRFGGF+R TL A VAAGRVDLARE+R+ RCREAHR
Sbjct:   91 VKLFDLSAGKMTRHFRGHMSNVTVIDCGSFDRRFVTTGSMDCQVTDVQFSPDGHILASAAADGQVKLWDLRAGKPMHTFQACSGAVRAIXXXXXXXXXXXXXXXXXXXXXXXEFMELFCPTAPDTCPTR--------AITFDPDGQKMYCASPSGLRRWSWDNHIASAQLEAMGDVPWGKVGAGALHYNADGQQGRNLGAA----SESSAPLDTP----------------------ARGAT-----------------------------------TTATESPSDPSLSTTDREYGDADAKVPESRPSRGNTFPASRDG------QRSHSRDSKPTMEKEASGGDDGSXXXXXXXXXXXXXMPAFQVLGRQVVLLPTAAEEKAKPSSPXXXXXXXXXXXXXXXXVGGPASAGGGRIQNRHAARAEAVAXXXXXXXXXXXXT------DDAVASVAGSIRHRSVGTSISDTLVIAD-------GCTADQ--ADDRAGGREHRPAAWSEPAPGKDDGGNYVRDCGRGVAAALGVVAAGDRHRLSGERRATGGADDGDECKWHKRVAGAFAGVEGTADDEKGMERRDDSGGDGSGGKTRGKGNADEKEARREGDGTDRAANVGVPSGVTSRMTVDPWPKDSWVEAEGRNRAGVPG----GGEDSPPLLGSPEPAPAAASNPARSMNEPPSFPSSSRRSPDRPQPSDKTDTVVTRSSAVGFPITTADGSISGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGPEPEGLSVA-DIFGDGGGDCGGGGSDELGMTRPRTATRRWDRPGPPGEDEVIAKTLLSRATATSTLSNRY--------GWADGDVSGTISKLTRLERSATVADDSPRTVVADFLWVVPLDGTRVTLDHCLELMPLLEGLWKVAETPACLPSFLTTRCVAAATRCLESIVRRFGGFIRDTLTAPVAAGRVDLAREDRVARCREAHR 954          
BLAST of mRNA_M-pyrifera_M_contig1148.3075.1 vs. uniprot
Match: A0A836CLK5_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLK5_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 2.460e-9
Identity = 81/240 (33.75%), Postives = 103/240 (42.92%), Query Frame = 0
Query:    2 VKLWNVETKQCAMGFKGHNAEITDVQFSPDGYILASAAADGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXI------EFMELFCTTAPDTCQTRQGEKTLIWAIIFDPDGQNMFCASPSGLRRWTWDNDTSTTKLGAMGDVAWGKVGAGALHYNVDGQQLLAASCAGSRVSVWAVDFD-TDLPPPGRQEPPHLPGEHG---------VNPFGSRGSTRSHG 225
            VK+WN  TK+C M FKGH AE+ +VQFSPDG++LAS A DG                               XXXXXXXXXXXXXXXXX       E MELFC T+P++ Q          A+ F+ +G                                       ALHYN +GQ ++AA+   + VS+WA D D   L P G          HG         V+PF +R + +  G
Sbjct:  131 VKVWNTATKECVMAFKGHGAEVCEVQFSPDGFLLASGARDGDVRIWDVRAGKLLHAFAACGGGSGGGSGVRAXXXXXXXXXXXXXXXXXXXXXXXXEEMELFCATSPESSQFH--------AMAFNAEGNR-------------------------------------ALHYNPEGQ-VVAATSTSNFVSIWAFDVDDAPLDPDGETPTQQERDAHGGDRNVQCKSVSPFHARAAAKHDG 324          
BLAST of mRNA_M-pyrifera_M_contig1148.3075.1 vs. uniprot
Match: A0A061QZZ4_9CHLO (Katanin p80 WD40 repeat-containing subunit B1 homolog n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061QZZ4_9CHLO)

HSP 1 Score: 68.2 bits (165), Expect = 5.550e-8
Identity = 43/147 (29.25%), Postives = 75/147 (51.02%), Query Frame = 0
Query:  702 ELIAQTLLSRASVTSSLSHRLTHLRVLRSSWADGDISGTISRLVRLENSATNSDASPRAVVSDFLWVVPLDGARVTLEHCLELMPLLEDLWKLDADSSVAAGTRCLESVVRRFGGFVRSTLGASVAAGRVDLAREERMDRCREAHRA 848
            E++++ L    ++ + LS R ++L+V+R  WA GD+ G ++ L R ++         ++V +D L VV        LEHC E++P+L+DL     D           ++++ +G  +RST  A    G  D+A E R ++C  A  A
Sbjct:  518 EVLSELLGKHPTMLAVLSTRSSNLQVVRGLWAKGDVRGALAALKRCQD---------QSVAADLLGVVGKQQDAFKLEHCGEVLPILDDLLASTHDQWQLVAAETCANLLKSYGQIIRSTFSAVSGIG-PDMAMEARREKCTNAKNA 654          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig1148.3075.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LQ17_ECTSI3.480e-14045.30Katanin p80 WD40 repeat-containing subunit B1 homo... [more]
A0A6H5K3J5_9PHAE1.060e-11340.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CLK5_9STRA2.460e-933.75WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
A0A061QZZ4_9CHLO5.550e-829.25Katanin p80 WD40 repeat-containing subunit B1 homo... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 101..139
e-value: 11.0
score: 10.3
coord: 51..90
e-value: 9.5E-6
score: 35.1
coord: 9..48
e-value: 1.2E-10
score: 51.4
IPR001680WD40 repeatPFAMPF00400WD40coord: 52..90
e-value: 0.025
score: 15.4
coord: 11..48
e-value: 7.2E-8
score: 33.0
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 58..92
score: 9.339
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 16..57
score: 18.796
IPR028021Katanin p80 subunit, C-terminalPFAMPF13925Katanin_con80coord: 712..850
e-value: 1.7E-20
score: 73.7
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..202
e-value: 7.8E-36
score: 125.6
NoneNo IPR availablePANTHERPTHR19845KATANIN P80 SUBUNITcoord: 700..851
coord: 2..192
NoneNo IPR availablePANTHERPTHR19845:SF0KATANIN P80 WD40 REPEAT-CONTAINING SUBUNIT B1coord: 700..851
coord: 2..192
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 35..49
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 1..99
score: 27.342
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 2..196

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig1148contigM-pyrifera_M_contig1148:840..9965 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig1148.3075.1mRNA_M-pyrifera_M_contig1148.3075.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig1148 840..9965 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig1148.3075.1 ID=prot_M-pyrifera_M_contig1148.3075.1|Name=mRNA_M-pyrifera_M_contig1148.3075.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=887bp
QVKLWNVETKQCAMGFKGHNAEITDVQFSPDGYILASAAADGQVKLWDLR
AGKPMHTFQACSGAVRALRFNPQEFLLAVSTSDRTVKLYDIEFMELFCTT
APDTCQTRQGEKTLIWAIIFDPDGQNMFCASPSGLRRWTWDNDTSTTKLG
AMGDVAWGKVGAGALHYNVDGQQLLAASCAGSRVSVWAVDFDTDLPPPGR
QEPPHLPGEHGVNPFGSRGSTRSHGPLAAAASILAAGPSASALTSGTAAA
TAAAAMTMATGQDTAVSLLSVVATGSDSAGRDRGGLGKGSEDASGKVGHQ
AERARDSKLGEDKEHVEGSAGSLAFQVLGRHLPLSTAADEKASSPAATPG
AALVTAPINSGTADASEAGSSSVVASSGGPDRRSTRAAAVAAAVAAVASA
KAATDDAVASVSSSGRHRSIGTSISDTLVISSSSRDSGVGCRGDDGGSIN
LAEGGGQQPDVWPERAPGKEDGGVAGEQGAAAGSSRHHHGGRLAGNGVEH
KWHKRVTGSSACDAAGEKLGYWVGSGKGGVRGDGALSIQDAGRAAAAQGA
ASSATPSDLMINPWPQPSRGGGGYRHALDGVEARGGGGEDSPPLLGSPES
PPPAVRHSPPFPPSRRSPDDSREEKPVGVVARSIAGFPTSSTPGGGGGLD
VTPGLNPAGGSREGDVWIADDGREGVRGELGMTRPRTATRRWDRPGPPGE
DELIAQTLLSRASVTSSLSHRLTHLRVLRSSWADGDISGTISRLVRLENS
ATNSDASPRAVVSDFLWVVPLDGARVTLEHCLELMPLLEDLWKLDADSSV
AAGTRCLESVVRRFGGFVRSTLGASVAAGRVDLAREERMDRCREAHRAFI
RGYRHLERAEREFYEDRRIAAVARRLRPLFESYFMS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR028021Katanin_C-terminal
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf