prot_M-pyrifera_M_contig114795.3074.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig114795.3074.1
Unique Nameprot_M-pyrifera_M_contig114795.3074.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length68
Homology
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BLAST of mRNA_M-pyrifera_M_contig114795.3074.1 vs. uniprot
Match: A0A7R9YA22_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YA22_9STRA)

HSP 1 Score: 48.5 bits (114), Expect = 7.790e-5
Identity = 22/55 (40.00%), Postives = 35/55 (63.64%), Query Frame = 0 
Query:   11 RVALHVHAELGHGEQVYVVGNLAAFGSWEKGNGMALVTNPEEYPVWRTRTPVAVP 65
            ++++ V+A+L  G+ +++ G+    G +      ALVT PEEYPVWRT  P+ VP
Sbjct:   18 KLSVRVNAQLQRGQTLHISGSSPTLGRFVVNEAPALVTTPEEYPVWRTLHPLVVP 72
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig114795.3074.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A7R9YA22_9STRA7.790e-540.00Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002044Carbohydrate binding module family 20PFAMPF00686CBM_20coord: 10..60
e-value: 4.1E-10
score: 39.4
IPR002044Carbohydrate binding module family 20PROSITEPS51166CBM20coord: 4..68
score: 9.52
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 3..68
e-value: 1.6E-10
score: 42.5
IPR013784Carbohydrate-binding-like foldSUPERFAMILY49452Starch-binding domain-likecoord: 7..62

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig114795contigM-pyrifera_M_contig114795:2..205 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig114795.3074.1mRNA_M-pyrifera_M_contig114795.3074.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig114795 2..205 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig114795.3074.1 ID=prot_M-pyrifera_M_contig114795.3074.1|Name=mRNA_M-pyrifera_M_contig114795.3074.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=68bp
MFWTRQTPVCRVALHVHAELGHGEQVYVVGNLAAFGSWEKGNGMALVTNP
EEYPVWRTRTPVAVPPSS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002044CBM_fam20
IPR013783Ig-like_fold
IPR013784Carb-bd-like_fold