prot_M-pyrifera_M_contig114789.3072.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig114789.3072.1
Unique Nameprot_M-pyrifera_M_contig114789.3072.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length180
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig114789.3072.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006597Sel1-like repeatSMARTSM00671sel1coord: 17..52
e-value: 5.2E-6
score: 36.0
coord: 53..88
e-value: 2.5E-9
score: 47.0
coord: 89..124
e-value: 1.3E-5
score: 34.6
coord: 125..160
e-value: 1.8E-5
score: 34.1
IPR006597Sel1-like repeatPFAMPF08238Sel1coord: 92..124
e-value: 0.0048
score: 17.5
coord: 163..177
e-value: 110.0
score: 3.6
coord: 53..88
e-value: 1.8E-6
score: 28.4
coord: 18..52
e-value: 1.2E-4
score: 22.6
coord: 126..160
e-value: 3.6E-5
score: 24.3
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..180
e-value: 2.1E-56
score: 193.3
NoneNo IPR availablePANTHERPTHR43628FAMILY NOT NAMEDcoord: 2..122
coord: 34..174
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 2..177

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig114789contigM-pyrifera_M_contig114789:1..540 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig114789.3072.1mRNA_M-pyrifera_M_contig114789.3072.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig114789 1..570 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig114789.3072.1 ID=prot_M-pyrifera_M_contig114789.3072.1|Name=mRNA_M-pyrifera_M_contig114789.3072.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=180bp
MAEAVRLWRRSAGEGNVDAMCSLAVCYAEGTVVEKDPEEAARLWTQAVDG
GSADAMCNLGLCYEKGKGVEVDLALAARLFMQAADGGNAAGMWCLGRCYE
IGEGVQQDEAAAARLYRQAVEGGDVDAMCSLGACLERGEGVARDVDEAMG
LWRQAAESGSRRALFSLGLRYEKGEGVEMD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006597Sel1-like
IPR011990TPR-like_helical_dom_sf