prot_M-pyrifera_M_contig114788.3071.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig114788.3071.1
Unique Nameprot_M-pyrifera_M_contig114788.3071.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length126
Homology
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BLAST of mRNA_M-pyrifera_M_contig114788.3071.1 vs. uniprot
Match: A0A2K9LDH5_9RHOO (Uncharacterized protein n=2 Tax=Rhodocyclales TaxID=206389 RepID=A0A2K9LDH5_9RHOO)

HSP 1 Score: 49.7 bits (117), Expect = 5.170e-5
Identity = 34/91 (37.36%), Postives = 50/91 (54.95%), Query Frame = 0 
Query:    1 MTISDSKSDPVSGFTLLETIVAFVIISISLAIAVRTVSFSIHNAERTRVETQLRNIAKVVLTENEALIRLGIDESG-TVDQHFSWHLSVNP 90
            M+I       VSGF+LLE +VAF I++I+L +       S+  A+ T   T+   +A+ +L+ N A+ R GI  SG T +  F W LS  P
Sbjct:    1 MSIRQVSPRHVSGFSLLEVLVAFTIMAIALGVLYHAAGGSMRGAQATDRNTRALILAQSLLSLNSAVPRQGIRLSGSTANGEFDWSLSSEP 91
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig114788.3071.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2K9LDH5_9RHOO5.170e-537.36Uncharacterized protein n=2 Tax=Rhodocyclales TaxI... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012902Prokaryotic N-terminal methylation sitePFAMPF07963N_methylcoord: 12..33
e-value: 9.7E-6
score: 24.9
IPR012902Prokaryotic N-terminal methylation sitePROSITEPS00409PROKAR_NTER_METHYLcoord: 12..32
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..19
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..38
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 39..125
NoneNo IPR availableSUPERFAMILY54523Pili subunitscoord: 14..61
NoneNo IPR availableTMHMMTMhelixcoord: 15..37

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig114788contigM-pyrifera_M_contig114788:92..469 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig114788.3071.1mRNA_M-pyrifera_M_contig114788.3071.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig114788 92..469 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig114788.3071.1 ID=prot_M-pyrifera_M_contig114788.3071.1|Name=mRNA_M-pyrifera_M_contig114788.3071.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=126bp
MTISDSKSDPVSGFTLLETIVAFVIISISLAIAVRTVSFSIHNAERTRVE
TQLRNIAKVVLTENEALIRLGIDESGTVDQHFSWHLSVNPMTIKETKDSG
VLVLQVQHEAQPFLTATFISFLGDE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012902N_methyl_site