prot_M-pyrifera_M_contig114706.3060.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig114706.3060.1
Unique Nameprot_M-pyrifera_M_contig114706.3060.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length95
Homology
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BLAST of mRNA_M-pyrifera_M_contig114706.3060.1 vs. uniprot
Match: A0A1G6DUS5_9HYPH (Uncharacterized protein involved in exopolysaccharide biosynthesis n=2 Tax=Bauldia litoralis TaxID=665467 RepID=A0A1G6DUS5_9HYPH)

HSP 1 Score: 176 bits (445), Expect = 6.380e-51
Identity = 93/95 (97.89%), Postives = 95/95 (100.00%), Query Frame = 0 
Query:    1 VAHTLDNQGTAVAGPASPRARSYAEARSASGLAVERGRLVDRRVSDGTVAVDIGHLGGWLRRGLVVLFLLAILGAVAGFLFATMTKPIYTVSTDI 95
            +AHTLDNQGTAVAGPASPRARSYAEAR+ASGLAVERGRLVDRRVSDGTVAVDIGHLGGWLRRGLVVLFLLAILGAVAGFLFATMTKPIYTVSTDI
Sbjct:    1 MAHTLDNQGTAVAGPASPRARSYAEARAASGLAVERGRLVDRRVSDGTVAVDIGHLGGWLRRGLVVLFLLAILGAVAGFLFATMTKPIYTVSTDI 95
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig114706.3060.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A1G6DUS5_9HYPH6.380e-5197.89Uncharacterized protein involved in exopolysacchar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 85..95
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..63
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 64..84
NoneNo IPR availableTMHMMTMhelixcoord: 63..85

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig114706contigM-pyrifera_M_contig114706:3..287 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig114706.3060.1mRNA_M-pyrifera_M_contig114706.3060.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig114706 3..287 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig114706.3060.1 ID=prot_M-pyrifera_M_contig114706.3060.1|Name=mRNA_M-pyrifera_M_contig114706.3060.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=95bp
VAHTLDNQGTAVAGPASPRARSYAEARSASGLAVERGRLVDRRVSDGTVA
VDIGHLGGWLRRGLVVLFLLAILGAVAGFLFATMTKPIYTVSTDI
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