prot_M-pyrifera_M_contig114687.3058.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig114687.3058.1
Unique Nameprot_M-pyrifera_M_contig114687.3058.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length37
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig114687.3058.1 vs. uniprot
Match: A0A2G5L501_9BACT (Uncharacterized protein n=1 Tax=Reichenbachiella sp. 5M10 TaxID=1889772 RepID=A0A2G5L501_9BACT)

HSP 1 Score: 55.5 bits (132), Expect = 4.010e-9
Identity = 25/35 (71.43%), Postives = 28/35 (80.00%), Query Frame = 0 
Query:    1 MTMIILIAVLFVGAAICPFVLPNEKVSDHEKDWDT 35
            M M++ I VLFV A IC FVLPNEKVS+HEKDWD 
Sbjct:   46 MAMLVFIFVLFVAAIICAFVLPNEKVSNHEKDWDV 80
[Close]
BLAST of mRNA_M-pyrifera_M_contig114687.3058.1 vs. uniprot
Match: A0A1M6WUR7_9BACT (Uncharacterized protein n=1 Tax=Reichenbachiella agariperforans TaxID=156994 RepID=A0A1M6WUR7_9BACT)

HSP 1 Score: 54.3 bits (129), Expect = 6.990e-9
Identity = 25/35 (71.43%), Postives = 28/35 (80.00%), Query Frame = 0 
Query:    1 MTMIILIAVLFVGAAICPFVLPNEKVSDHEKDWDT 35
            M M+ LI VLFV A +C FVLPNEKVS+HEKDWD 
Sbjct:   25 MAMLGLIIVLFVAAIVCAFVLPNEKVSNHEKDWDV 59
[Close]
BLAST of mRNA_M-pyrifera_M_contig114687.3058.1 vs. uniprot
Match: A0A3D9KYC5_MARFU (Uncharacterized protein n=1 Tax=Marinoscillum furvescens DSM 4134 TaxID=1122208 RepID=A0A3D9KYC5_MARFU)

HSP 1 Score: 43.5 bits (101), Expect = 7.910e-5
Identity = 18/32 (56.25%), Postives = 24/32 (75.00%), Query Frame = 0 
Query:    1 MTMIILIAVLFVGAAICPFVLPNEKVSDHEKD 32
            M M+ +I ++FV A +CP +LPN KVS HEKD
Sbjct:    1 MAMLGIIIIMFVAAIVCPIILPNNKVSSHEKD 32
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig114687.3058.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2G5L501_9BACT4.010e-971.43Uncharacterized protein n=1 Tax=Reichenbachiella s... [more]
A0A1M6WUR7_9BACT6.990e-971.43Uncharacterized protein n=1 Tax=Reichenbachiella a... [more]
A0A3D9KYC5_MARFU7.910e-556.25Uncharacterized protein n=1 Tax=Marinoscillum furv... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..17
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..36
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availableTMHMMTMhelixcoord: 5..22

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig114687contigM-pyrifera_M_contig114687:168..278 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig114687.3058.1mRNA_M-pyrifera_M_contig114687.3058.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig114687 168..393 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig114687.3058.1 ID=prot_M-pyrifera_M_contig114687.3058.1|Name=mRNA_M-pyrifera_M_contig114687.3058.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=37bp
MTMIILIAVLFVGAAICPFVLPNEKVSDHEKDWDTW*
back to top