prot_M-pyrifera_M_contig114682.3056.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig114682.3056.1
Unique Name	prot_M-pyrifera_M_contig114682.3056.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	176

Homology

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BLAST of mRNA_M-pyrifera_M_contig114682.3056.1 vs. uniprot
Match: A0A7Y2IV52_9ACTN (Cytochrome aa3 subunit 3 n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7Y2IV52_9ACTN)

HSP 1 Score: 331 bits (849), Expect = 4.000e-114
Identity = 167/175 (95.43%), Postives = 171/175 (97.71%), Query Frame = 0

Query:    1 GSECLLFGGLFSTYLLYKTRRGPGPDNITIPTDIFDIPFTSVSSFVLLMSSLTMVLALSALSRGDNPATRAWLLATAMLGGVFIGGQVYEFTSFLREGVGFTHNPASSAFYTLTGFHGVHVSLGIVMLMSLYVASKQGKLTPKHTETVEIVGLYWHFVDVVWIFIFTVIYLIPVE 175
            GSECLLFGGL STYLLYKTRRGPGP+N TIPTDIFDIPFTSVSSFVLLMSSLTMVLALSAL+RGDN ATRAWLLATAMLGGVFIGGQVYEFTSFLREGVGFTHNPASSAFYTLTGFHGVHVSLGIVMLMSL+VASKQGKLTP +TETVEIVGLYWHFVDVVWIFIFTVIYLIPVE
Sbjct:   33 GSECLLFGGLISTYLLYKTRRGPGPENTTIPTDIFDIPFTSVSSFVLLMSSLTMVLALSALTRGDNQATRAWLLATAMLGGVFIGGQVYEFTSFLREGVGFTHNPASSAFYTLTGFHGVHVSLGIVMLMSLFVASKQGKLTPNNTETVEIVGLYWHFVDVVWIFIFTVIYLIPVE 207

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BLAST of mRNA_M-pyrifera_M_contig114682.3056.1 vs. uniprot
Match: A0A6B1AYN8_9ACTN (Cytochrome aa3 subunit 3 n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B1AYN8_9ACTN)

HSP 1 Score: 297 bits (760), Expect = 5.160e-101
Identity = 148/173 (85.55%), Postives = 161/173 (93.06%), Query Frame = 0

Query:    1 GSECLLFGGLFSTYLLYKTRRGPGPDNITIPTDIFDIPFTSVSSFVLLMSSLTMVLALSALSRGDNPATRAWLLATAMLGGVFIGGQVYEFTSFLREGVGFTHNPASSAFYTLTGFHGVHVSLGIVMLMSLYVASKQGKLTPKHTETVEIVGLYWHFVDVVWIFIFTVIYLIP 173
            GSECLLFGGL STYLLYKTRRGP  DN+ IPTD+FDIPFTS+SSFVLLMSSLTMVLAL+A++RGDN   R WLLAT+MLGGVFIGGQVYEFTSFLREGVGFT+NPASSAFY LTGFHGVHVSLGIVMLMSL+VAS QGKL  +H+ETVE+VGLYWHFVDVVWIFIFTVIYL+P
Sbjct:    6 GSECLLFGGLISTYLLYKTRRGP--DNLAIPTDVFDIPFTSISSFVLLMSSLTMVLALAAITRGDNHGARVWLLATSMLGGVFIGGQVYEFTSFLREGVGFTNNPASSAFYALTGFHGVHVSLGIVMLMSLFVASWQGKLRQEHSETVEVVGLYWHFVDVVWIFIFTVIYLVP 176

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BLAST of mRNA_M-pyrifera_M_contig114682.3056.1 vs. uniprot
Match: A0A7K2E241_9ACTN (Cytochrome aa3 subunit 3 n=4 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K2E241_9ACTN)

HSP 1 Score: 275 bits (704), Expect = 5.430e-92
Identity = 143/175 (81.71%), Postives = 158/175 (90.29%), Query Frame = 0

Query:    1 GSECLLFGGLFSTYLLYKTRRGPGPDNITIPTDIFDIPFTSVSSFVLLMSSLTMVLALSALSRGDNPATRAWLLATAMLGGVFIGGQVYEFTSFLREGVGFTHNPASSAFYTLTGFHGVHVSLGIVMLMSLYVASKQGKLTPKHTETVEIVGLYWHFVDVVWIFIFTVIYLIPVE 175
            GSECLLFGGL STYLLYKTR G G    T+PTD+FDIPFTSVSSFVLLMSSLTMVLALSA++RG+  A R WLLATA+LGGVFIGGQVYEFT+F+REGV FT NPASSAF+TLTGFHGVHVSLGIVMLMSL+VAS +GKLT ++ ETVEIVGLYWHFVD+VWIFIFTVIYLIP +
Sbjct:   40 GSECLLFGGLISTYLLYKTR-GNGR---TLPTDVFDIPFTSVSSFVLLMSSLTMVLALSAVTRGEAEAGRTWLLATALLGGVFIGGQVYEFTAFVREGVAFTTNPASSAFFTLTGFHGVHVSLGIVMLMSLFVASLKGKLTQRNAETVEIVGLYWHFVDIVWIFIFTVIYLIPAD 210

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BLAST of mRNA_M-pyrifera_M_contig114682.3056.1 vs. uniprot
Match: A0A3M2GJ07_ACTSX (Cytochrome aa3 subunit 3 n=1 Tax=Actinomyces sp. TaxID=29317 RepID=A0A3M2GJ07_ACTSX)

HSP 1 Score: 263 bits (673), Expect = 2.320e-87
Identity = 131/175 (74.86%), Postives = 154/175 (88.00%), Query Frame = 0

Query:    1 GSECLLFGGLFSTYLLYKTRRGPGPDNITIPTDIFDIPFTSVSSFVLLMSSLTMVLALSALSRGDNPATRAWLLATAMLGGVFIGGQVYEFTSFLREGVGFTHNPASSAFYTLTGFHGVHVSLGIVMLMSLYVASKQGKLTPKHTETVEIVGLYWHFVDVVWIFIFTVIYLIPVE 175
            GSECLLFGGL STYLLYKT+   G     +PTD+FDIPFTSVSSFVLLMSS+TMVLAL+A++RGD    RAWLLATA+ G VFIGGQVYEFT+F+REG+GFT NPA+SAF+TLTGFHGVHV++GIVMLMSL+V S +GK+T ++ ETVEIVGLYWHFVD+VWIFIFTV+YLIP +
Sbjct:   33 GSECLLFGGLISTYLLYKTKDAGGT---VLPTDVFDIPFTSVSSFVLLMSSMTMVLALAAVARGDQQRGRAWLLATALQGMVFIGGQVYEFTTFVREGMGFTTNPAASAFFTLTGFHGVHVTIGIVMLMSLFVMSLKGKITAENAETVEIVGLYWHFVDIVWIFIFTVVYLIPAD 204

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BLAST of mRNA_M-pyrifera_M_contig114682.3056.1 vs. uniprot
Match: A0A2E6VL82_9ACTN (Cytochrome aa3 subunit 3 n=5 Tax=Actinobacteria TaxID=201174 RepID=A0A2E6VL82_9ACTN)

HSP 1 Score: 257 bits (656), Expect = 3.730e-85
Identity = 132/173 (76.30%), Postives = 147/173 (84.97%), Query Frame = 0

Query:    1 GSECLLFGGLFSTYLLYKTRRGPGPDNITIPTDIFDIPFTSVSSFVLLMSSLTMVLALSALSRGDNPATRAWLLATAMLGGVFIGGQVYEFTSFLREGVGFTHNPASSAFYTLTGFHGVHVSLGIVMLMSLYVASKQGKLTPKHTETVEIVGLYWHFVDVVWIFIFTVIYLIP 173
            GSECLLFGGL STYL+Y++R   GP     P DIFDIPFTSVSSFVLLMSSLTMVLALSAL RGD    R WLL TA+LG +FIGGQVYEFT+FLREG+G+T +P SSAF+TLTGFHGVHVS+GIVMLMSLYV+S +G L  +  ETVEIVGLYWHFVDVVWIFIFTVIYL+P
Sbjct:    6 GSECLLFGGLISTYLIYRSRFADGP----APGDIFDIPFTSVSSFVLLMSSLTMVLALSALQRGDYRNNRLWLLTTALLGALFIGGQVYEFTTFLREGLGYTTSPFSSAFFTLTGFHGVHVSIGIVMLMSLYVSSMRGNLRRESAETVEIVGLYWHFVDVVWIFIFTVIYLVP 174

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BLAST of mRNA_M-pyrifera_M_contig114682.3056.1 vs. uniprot
Match: A0A7C7S7G5_9ACTN (Cytochrome aa3 subunit 3 n=13 Tax=root TaxID=1 RepID=A0A7C7S7G5_9ACTN)

HSP 1 Score: 256 bits (655), Expect = 9.400e-85
Identity = 131/173 (75.72%), Postives = 149/173 (86.13%), Query Frame = 0

Query:    1 GSECLLFGGLFSTYLLYKTRRGPGPDNITIPTDIFDIPFTSVSSFVLLMSSLTMVLALSALSRGDNPATRAWLLATAMLGGVFIGGQVYEFTSFLREGVGFTHNPASSAFYTLTGFHGVHVSLGIVMLMSLYVASKQGKLTPKHTETVEIVGLYWHFVDVVWIFIFTVIYLIP 173
            GSECLLFGGL STYL+Y++R   GP     P DIFDIPFTSVSSFVLLMSSLTMVL+LSAL RGD    R WLLATA+LG +FIGGQVYEFT+FLREG+G+T +P SSAF+TLTGFHG+HVSLGIVML+SL +AS +G LT + +ETVEIVGLYWHFVDVVWIFIFTVIYL+P
Sbjct:   23 GSECLLFGGLISTYLIYRSRYADGP----APGDIFDIPFTSVSSFVLLMSSLTMVLSLSALQRGDIRNNRVWLLATALLGSLFIGGQVYEFTTFLREGLGYTTSPFSSAFFTLTGFHGIHVSLGIVMLVSLLIASFRGTLTKERSETVEIVGLYWHFVDVVWIFIFTVIYLVP 191

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BLAST of mRNA_M-pyrifera_M_contig114682.3056.1 vs. uniprot
Match: A0A2E5ZJ58_9ACTN (Cytochrome aa3 subunit 3 n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E5ZJ58_9ACTN)

HSP 1 Score: 257 bits (657), Expect = 9.760e-85
Identity = 132/173 (76.30%), Postives = 149/173 (86.13%), Query Frame = 0

Query:    1 GSECLLFGGLFSTYLLYKTRRGPGPDNITIPTDIFDIPFTSVSSFVLLMSSLTMVLALSALSRGDNPATRAWLLATAMLGGVFIGGQVYEFTSFLREGVGFTHNPASSAFYTLTGFHGVHVSLGIVMLMSLYVASKQGKLTPKHTETVEIVGLYWHFVDVVWIFIFTVIYLIP 173
            GSECLLFGGL STYL+Y++R G GP     P DIFDIPFTSVSSFVLLMSSLTMVL+LSAL RGD    R WLL TA+LG +FIGGQVYEFT+FLREG+G+T +P SSAF+TLTGFHGVHVSLGIVMLMSL ++S +G LT + +ETVEIVGLYWHFVDVVWIFIFTVIYL+P
Sbjct:   45 GSECLLFGGLISTYLIYRSRFGDGP----APGDIFDIPFTSVSSFVLLMSSLTMVLSLSALQRGDIRNNRIWLLTTALLGALFIGGQVYEFTTFLREGLGYTTSPFSSAFFTLTGFHGVHVSLGIVMLMSLLISSFRGTLTKERSETVEIVGLYWHFVDVVWIFIFTVIYLVP 213

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BLAST of mRNA_M-pyrifera_M_contig114682.3056.1 vs. uniprot
Match: A0A2D8LVE1_9ACTN (Cytochrome aa3 subunit 3 n=4 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2D8LVE1_9ACTN)

HSP 1 Score: 254 bits (650), Expect = 8.110e-84
Identity = 131/174 (75.29%), Postives = 148/174 (85.06%), Query Frame = 0

Query:    2 SECLLFGGLFSTYLLYKTRRGPGPDNITIPTDIFDIPFTSVSSFVLLMSSLTMVLALSALSRGDNPATRAWLLATAMLGGVFIGGQVYEFTSFLREGVGFTHNPASSAFYTLTGFHGVHVSLGIVMLMSLYVASKQGKLTPKHTETVEIVGLYWHFVDVVWIFIFTVIYLIPVE 175
            +ECLLFG L STYL+YKTR G G     +PTD+FDIPFTSVSSFVLLMSSLTMVLALSA  R D    +AWLL TAMLG VF+GGQ YEFT+F  EG+G+T NPA+SAFYTLTGFHG HVS+GI+MLMSL+VA+ QGKLT K++ETVEIVGLYWHFVD+VWIFIFTVIYLIP E
Sbjct:   38 TECLLFGALISTYLIYKTR-GNGE---VLPTDLFDIPFTSVSSFVLLMSSLTMVLALSAFGRNDLDRGKAWLLVTAMLGAVFMGGQAYEFTAFYEEGLGYTTNPAASAFYTLTGFHGAHVSIGIIMLMSLWVAANQGKLTGKNSETVEIVGLYWHFVDLVWIFIFTVIYLIPPE 207

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BLAST of mRNA_M-pyrifera_M_contig114682.3056.1 vs. uniprot
Match: A0A0C1USF1_9ACTN (Cytochrome aa3 subunit 3 n=4 Tax=Actinobacteria TaxID=201174 RepID=A0A0C1USF1_9ACTN)

HSP 1 Score: 254 bits (648), Expect = 1.020e-83
Identity = 130/173 (75.14%), Postives = 147/173 (84.97%), Query Frame = 0

Query:    1 GSECLLFGGLFSTYLLYKTRRGPGPDNITIPTDIFDIPFTSVSSFVLLMSSLTMVLALSALSRGDNPATRAWLLATAMLGGVFIGGQVYEFTSFLREGVGFTHNPASSAFYTLTGFHGVHVSLGIVMLMSLYVASKQGKLTPKHTETVEIVGLYWHFVDVVWIFIFTVIYLIP 173
            GSECLLFG L STYLLY+ +   GP     P DIFDIPFTSVSSFVLLMSSLTMVLALSAL +GD    R WLL TA+LG VFIGGQVYEFT+F+REG+G+T +P SSAF+TLTGFHGVHVSLGIVM+MSL ++S +GKLT K+TETVEI+GLYWHFVDVVWI IFTVIYL+P
Sbjct:   21 GSECLLFGALISTYLLYRNKFYDGP----APGDIFDIPFTSVSSFVLLMSSLTMVLALSALQKGDIRNNRLWLLTTALLGAVFIGGQVYEFTTFIREGLGYTTSPFSSAFFTLTGFHGVHVSLGIVMIMSLLISSYRGKLTKKNTETVEIIGLYWHFVDVVWIIIFTVIYLVP 189

[Close]

BLAST of mRNA_M-pyrifera_M_contig114682.3056.1 vs. uniprot
Match: A0A7Y2D9K3_9ACTN (Cytochrome aa3 subunit 3 n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2D9K3_9ACTN)

HSP 1 Score: 251 bits (641), Expect = 7.170e-83
Identity = 125/171 (73.10%), Postives = 146/171 (85.38%), Query Frame = 0

Query:    1 GSECLLFGGLFSTYLLYKTRRGPGPDNITIPTDIFDIPFTSVSSFVLLMSSLTMVLALSALSRGDNPATRAWLLATAMLGGVFIGGQVYEFTSFLREGVGFTHNPASSAFYTLTGFHGVHVSLGIVMLMSLYVASKQGKLTPKHTETVEIVGLYWHFVDVVWIFIFTVIYL 171
            GSECLLFGGL STY+LY+     GPD      ++FDIPFTSVSSFVLLMSSLTMVLALSA++RGD+  TR WLL TA+LGG+FIGGQVYEFT F  EG+G+T +P SSAFYTLTGFHGVHV+LGI+MLMSLYV+S +GKL  ++ ETVE+VGLYWHFVDVVW+FIFTV+YL
Sbjct:    6 GSECLLFGGLISTYMLYRNNHQDGPD----AAELFDIPFTSVSSFVLLMSSLTMVLALSAITRGDHQRTRLWLLTTALLGGLFIGGQVYEFTVFYEEGLGYTTSPFSSAFYTLTGFHGVHVTLGIMMLMSLYVSSLRGKLHQRNAETVELVGLYWHFVDVVWVFIFTVVYL 172

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig114682.3056.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig114682.3056.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A7Y2IV52_9ACTN	4.000e-114	95.43	Cytochrome aa3 subunit 3 n=1 Tax=Acidimicrobiia ba...	[more]
A0A6B1AYN8_9ACTN	5.160e-101	85.55	Cytochrome aa3 subunit 3 n=1 Tax=Acidimicrobiaceae...	[more]
A0A7K2E241_9ACTN	5.430e-92	81.71	Cytochrome aa3 subunit 3 n=4 Tax=Acidimicrobiaceae...	[more]
A0A3M2GJ07_ACTSX	2.320e-87	74.86	Cytochrome aa3 subunit 3 n=1 Tax=Actinomyces sp. T...	[more]
A0A2E6VL82_9ACTN	3.730e-85	76.30	Cytochrome aa3 subunit 3 n=5 Tax=Actinobacteria Ta...	[more]
A0A7C7S7G5_9ACTN	9.400e-85	75.72	Cytochrome aa3 subunit 3 n=13 Tax=root TaxID=1 Rep...	[more]
A0A2E5ZJ58_9ACTN	9.760e-85	76.30	Cytochrome aa3 subunit 3 n=1 Tax=Acidimicrobiaceae...	[more]
A0A2D8LVE1_9ACTN	8.110e-84	75.29	Cytochrome aa3 subunit 3 n=4 Tax=Acidimicrobiaceae...	[more]
A0A0C1USF1_9ACTN	1.020e-83	75.14	Cytochrome aa3 subunit 3 n=4 Tax=Actinobacteria Ta...	[more]
A0A7Y2D9K3_9ACTN	7.170e-83	73.10	Cytochrome aa3 subunit 3 n=1 Tax=Acidimicrobiales ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000298	Cytochrome c oxidase subunit III-like	PFAM	PF00510	COX3	coord: 32..171 e-value: 5.8E-21 score: 75.5
IPR000298	Cytochrome c oxidase subunit III-like	PROSITE	PS50253	COX3	coord: 1..174 score: 22.017
IPR013833	Cytochrome c oxidase, subunit III, 4-helical bundle	GENE3D	1.20.120.80		coord: 1..174 e-value: 1.5E-54 score: 186.5
IPR024791	Cytochrome c oxidase subunit III	PANTHER	PTHR11403	CYTOCHROME C OXIDASE SUBUNIT III	coord: 2..171
None	No IPR available	PANTHER	PTHR11403:SF0		coord: 2..171
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 71..89
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 109..133
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 37..59
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 153..172
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 22..36
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 173..175
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..21
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 17..21
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..3
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 4..16
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 90..108
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 134..152
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 60..70
None	No IPR available	TMHMM	TMhelix		coord: 72..94
None	No IPR available	TMHMM	TMhelix		coord: 152..174
None	No IPR available	TMHMM	TMhelix		coord: 37..59
None	No IPR available	TMHMM	TMhelix		coord: 109..131
IPR035973	Cytochrome c oxidase subunit III-like superfamily	SUPERFAMILY	81452	Cytochrome c oxidase subunit III-like	coord: 2..172

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig114682	contig	M-pyrifera_M_contig114682:3..530 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig114682.3056.1	mRNA_M-pyrifera_M_contig114682.3056.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig114682 3..530 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig114682.3056.1 ID=prot_M-pyrifera_M_contig114682.3056.1|Name=mRNA_M-pyrifera_M_contig114682.3056.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=176bp
GSECLLFGGLFSTYLLYKTRRGPGPDNITIPTDIFDIPFTSVSSFVLLMS
SLTMVLALSALSRGDNPATRAWLLATAMLGGVFIGGQVYEFTSFLREGVG
FTHNPASSAFYTLTGFHGVHVSLGIVMLMSLYVASKQGKLTPKHTETVEI
VGLYWHFVDVVWIFIFTVIYLIPVE*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000298	Cyt_c_oxidase-like_su3
IPR013833	Cyt_c_oxidase_su3_a-hlx
IPR024791	Cyt_c/ubiquinol_Oxase_su3
IPR035973	Cyt_c_oxidase_su3-like_sf