prot_M-pyrifera_M_contig114670.3053.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig114670.3053.1
Unique Nameprot_M-pyrifera_M_contig114670.3053.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length87
Homology
BLAST of mRNA_M-pyrifera_M_contig114670.3053.1 vs. uniprot
Match: A0A0M0K1W3_9EUKA (Aldose 1-epimerase n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0K1W3_9EUKA)

HSP 1 Score: 88.2 bits (217), Expect = 1.040e-18
Identity = 42/84 (50.00%), Postives = 59/84 (70.24%), Query Frame = 0
Query:    4 LVHTETGQQAEVIQDAGGRLEKLELLSKQRPGTLHSVIQTHDGNATAIRTNPHYAGALLAPWSNRIKNGTYSFRGHTYYLPHNE 87
            L +T TG++ E+I ++GG  E++ L S    G L  V+QT++ NATA+R N HYAG +L P++NRI+NGTY+F G  Y LP NE
Sbjct:   36 LSNTATGERVEIIWESGGNTERVRLRSPTT-GLLRDVLQTNNNNATAVRLNQHYAGNILLPFANRIRNGTYNFFGRAYLLPRNE 118          
BLAST of mRNA_M-pyrifera_M_contig114670.3053.1 vs. uniprot
Match: A0A7S1FEZ2_NOCSC (Hypothetical protein (Fragment) n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1FEZ2_NOCSC)

HSP 1 Score: 71.2 bits (173), Expect = 1.300e-12
Identity = 38/88 (43.18%), Postives = 53/88 (60.23%), Query Frame = 0
Query:    4 LVHTETGQQAEVIQDAGGRLEKLELLSKQRPGTLHSVIQTHDGNATAIRTNP-HYAGALLAPWSNRIKNGTYSF---RGHTYYLPHNE 87
            L+ T T +   VI D+GGR++ L L    R G +  V+  +  +A A+RTN  HY+  LLAPW+NR+ NGTY F    G  ++LP NE
Sbjct:   42 LIFTSTSESVTVIWDSGGRVDSLRLRDGAR-GVVREVLVNNGEDANAVRTNSNHYSSCLLAPWANRVANGTYRFPPGAGPPHFLPRNE 128          
BLAST of mRNA_M-pyrifera_M_contig114670.3053.1 vs. uniprot
Match: A9VBB2_MONBE (Predicted protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9VBB2_MONBE)

HSP 1 Score: 67.8 bits (164), Expect = 1.090e-11
Identity = 35/74 (47.30%), Postives = 49/74 (66.22%), Query Frame = 0
Query:    4 LVHTETGQQAEVIQDAGGRLEKLELLSKQRPGT--LHSVIQTHDGNATAIRTNPHYAGALLAPWSNRIKNGTYS 75
            L+ T T Q A +I + GGR+E + L+    P T  L  VI THDGNATA+ TNPH+ G +L P++NRI++ + S
Sbjct:   46 LLDTHTNQSAIIITNMGGRVEAIRLVD---PATNQLRDVIATHDGNATAMITNPHWQGEILLPYANRIRDASRS 116          
BLAST of mRNA_M-pyrifera_M_contig114670.3053.1 vs. uniprot
Match: A0A7S1QRT4_ALECA (Hypothetical protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1QRT4_ALECA)

HSP 1 Score: 62.8 bits (151), Expect = 1.430e-9
Identity = 32/84 (38.10%), Postives = 51/84 (60.71%), Query Frame = 0
Query:    4 LVHTETGQQAEVIQDAGGRLEKLELLSKQRPGTLHSVIQTHDGNATAIRTNPHYAGALLAPWSNRIKNGTYSFRGHTYYLPHNE 87
            L +  TG+ A +I++ GG +++L LLS +   TL  V+  H  N++ +  NP + G +L P++NRI N TY F G  + LP N+
Sbjct:   54 LTNRRTGENASIIENYGGCVDELFLLSSR--STLKRVLWDHGRNSSDVDANPTWKGRMLLPYANRIGNATYLFNGTRHVLPVND 135          
BLAST of mRNA_M-pyrifera_M_contig114670.3053.1 vs. uniprot
Match: A0A5C4MEY7_9ACTN (Uncharacterized protein n=1 Tax=Mumia zhuanghuii TaxID=2585211 RepID=A0A5C4MEY7_9ACTN)

HSP 1 Score: 51.2 bits (121), Expect = 1.550e-5
Identity = 23/49 (46.94%), Postives = 31/49 (63.27%), Query Frame = 0
Query:   44 HDGNATAIRTN-----PHYAGALLAPWSNRIKNGTYSFRGHTYYLPHNE 87
            HDGN   +  +     P Y G +LAPW NR+++GTY+F G TY +P NE
Sbjct:   25 HDGNDVVVPQDGEGGHPAYRGVVLAPWPNRLEDGTYTFGGRTYEVPLNE 73          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig114670.3053.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0M0K1W3_9EUKA1.040e-1850.00Aldose 1-epimerase n=1 Tax=Chrysochromulina tobini... [more]
A0A7S1FEZ2_NOCSC1.300e-1243.18Hypothetical protein (Fragment) n=1 Tax=Noctiluca ... [more]
A9VBB2_MONBE1.090e-1147.30Predicted protein n=1 Tax=Monosiga brevicollis Tax... [more]
A0A7S1QRT4_ALECA1.430e-938.10Hypothetical protein n=1 Tax=Alexandrium catenella... [more]
A0A5C4MEY7_9ACTN1.550e-546.94Uncharacterized protein n=1 Tax=Mumia zhuanghuii T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014718Glycoside hydrolase-type carbohydrate-bindingGENE3D2.70.98.10coord: 1..87
e-value: 8.1E-13
score: 50.1
IPR008183Aldose 1-/Glucose-6-phosphate 1-epimerasePFAMPF01263Aldose_epimcoord: 16..87
e-value: 1.1E-8
score: 34.8
IPR011013Galactose mutarotase-like domain superfamilySUPERFAMILY74650Galactose mutarotase-likecoord: 9..87

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig114670contigM-pyrifera_M_contig114670:42..302 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig114670.3053.1mRNA_M-pyrifera_M_contig114670.3053.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig114670 42..302 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig114670.3053.1 ID=prot_M-pyrifera_M_contig114670.3053.1|Name=mRNA_M-pyrifera_M_contig114670.3053.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=87bp
GYRLVHTETGQQAEVIQDAGGRLEKLELLSKQRPGTLHSVIQTHDGNATA
IRTNPHYAGALLAPWSNRIKNGTYSFRGHTYYLPHNE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014718GH-type_carb-bd
IPR008183Aldose_1/G6P_1-epimerase
IPR011013Gal_mutarotase_sf_dom