prot_M-pyrifera_M_contig114630.3046.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig114630.3046.1
Unique Name	prot_M-pyrifera_M_contig114630.3046.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	182

Homology

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BLAST of mRNA_M-pyrifera_M_contig114630.3046.1 vs. uniprot
Match: A0A2P6NN14_9EUKA (Uncharacterized protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NN14_9EUKA)

HSP 1 Score: 118 bits (295), Expect = 1.900e-27
Identity = 58/94 (61.70%), Postives = 72/94 (76.60%), Query Frame = 0

Query:   89 LARKNKLDELLVTMQSSVNRDLIDAVAVDFCYVNSKNSRKKLVKALYAVGRHKLVLLPYYARLAATLNKCMPDIGPALVELLEGEFRFLKKKKD 182
            L   + LD +L  + + VNRDLID  A DFCYVNSK +RKKLVKAL++V R +LVLLPYYAR+ + LNKCM DIGP LV +LE EF++L K+KD
Sbjct:  504 LGANSSLDTILFKLPTCVNRDLIDEAAKDFCYVNSKINRKKLVKALFSVPRTQLVLLPYYARMVSVLNKCMKDIGPQLVSMLEEEFQWLFKEKD 597

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BLAST of mRNA_M-pyrifera_M_contig114630.3046.1 vs. uniprot
Match: L8HJ34_ACACA (MIF4G domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HJ34_ACACA)

HSP 1 Score: 116 bits (291), Expect = 6.600e-27
Identity = 54/88 (61.36%), Postives = 68/88 (77.27%), Query Frame = 0

Query:   95 LDELLVTMQSSVNRDLIDAVAVDFCYVNSKNSRKKLVKALYAVGRHKLVLLPYYARLAATLNKCMPDIGPALVELLEGEFRFLKKKKD 182
            L+ELL  + + VNRDLID  A+DFCY+N+K +RKKL+K L+   R +L LLPYYARL ATLN+CM DIGPALV +LE EF +  +KKD
Sbjct:  647 LEELLHRLPNCVNRDLIDKAAIDFCYINTKGNRKKLIKTLFNAPRTQLALLPYYARLVATLNQCMKDIGPALVAMLEEEFNYFMRKKD 734

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BLAST of mRNA_M-pyrifera_M_contig114630.3046.1 vs. uniprot
Match: A0A388KY68_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388KY68_CHABU)

HSP 1 Score: 108 bits (271), Expect = 3.170e-24
Identity = 52/93 (55.91%), Postives = 69/93 (74.19%), Query Frame = 0

Query:   90 ARKNKLDELLVTMQSSVNRDLIDAVAVDFCYVNSKNSRKKLVKALYAVGRHKLVLLPYYARLAATLNKCMPDIGPALVELLEGEFRFLKKKKD 182
            A    LD LL  +   V+RD+ID +AVDFCY+NSK++RKKLV+AL++V R  L LLPYY+RL ATL++CM D+ P L+++LE EF  L  KKD
Sbjct:  581 AESASLDGLLQRLPGCVSRDMIDQLAVDFCYINSKSNRKKLVRALFSVPRTALELLPYYSRLVATLSQCMRDVAPFLLQMLEDEFNMLLNKKD 673

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BLAST of mRNA_M-pyrifera_M_contig114630.3046.1 vs. uniprot
Match: A0A175YN50_DAUCS (Uncharacterized protein n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=A0A175YN50_DAUCS)

HSP 1 Score: 107 bits (267), Expect = 1.080e-23
Identity = 52/88 (59.09%), Postives = 66/88 (75.00%), Query Frame = 0

Query:   95 LDELLVTMQSSVNRDLIDAVAVDFCYVNSKNSRKKLVKALYAVGRHKLVLLPYYARLAATLNKCMPDIGPALVELLEGEFRFLKKKKD 182
            LD LL  +   V+RDLID + V+FCYVNSK+SRKKLV+AL++V R  L LLPYY+R+ ATL+ CM D+   L++LLE EF FL  KKD
Sbjct:  473 LDGLLQRLPGCVSRDLIDQLTVEFCYVNSKSSRKKLVRALFSVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQLLEEEFNFLLNKKD 560

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BLAST of mRNA_M-pyrifera_M_contig114630.3046.1 vs. uniprot
Match: A0A397V1T3_9GLOM (Armadillo-type protein (Fragment) n=3 Tax=Gigaspora TaxID=4873 RepID=A0A397V1T3_9GLOM)

HSP 1 Score: 107 bits (266), Expect = 1.460e-23
Identity = 53/88 (60.23%), Postives = 66/88 (75.00%), Query Frame = 0

Query:   94 KLDELLVTMQSSVNRDLIDAVAVDFCYVNSKNSRKKLVKALYAVGRHKLVLLPYYARLAATLNKCMPDIGPALVELLEGEFRFLKKKK 181
            +LD LL  + + VNRDLID  AVDFCY+NSK SRKKL+K L  V R +L LLPYY+RL ATLN   PD+  A+++ LEGEF+ L+KKK
Sbjct:  468 QLDSLLSRLPNMVNRDLIDQAAVDFCYLNSKASRKKLIKTLVGVPRTRLDLLPYYSRLIATLNPHYPDVATAVLQALEGEFKSLQKKK 555

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BLAST of mRNA_M-pyrifera_M_contig114630.3046.1 vs. uniprot
Match: A0A7J7CI92_TRIWF (Regulator of nonsense transcripts 2 isoform 1 n=1 Tax=Tripterygium wilfordii TaxID=458696 RepID=A0A7J7CI92_TRIWF)

HSP 1 Score: 107 bits (266), Expect = 1.470e-23
Identity = 51/88 (57.95%), Postives = 66/88 (75.00%), Query Frame = 0

Query:   95 LDELLVTMQSSVNRDLIDAVAVDFCYVNSKNSRKKLVKALYAVGRHKLVLLPYYARLAATLNKCMPDIGPALVELLEGEFRFLKKKKD 182
            LD LL  +Q  V+RDLID + VDFCY+NSK++RKKLV+AL+ V R  L LLPYY+R+ ATL+ CM D+   L+++LE EF FL  KKD
Sbjct:  467 LDALLQRLQGCVSRDLIDQLTVDFCYLNSKSNRKKLVRALFTVPRTSLELLPYYSRMVATLSTCMKDVSSMLLQMLEEEFNFLINKKD 554

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BLAST of mRNA_M-pyrifera_M_contig114630.3046.1 vs. uniprot
Match: A0A2K1JVF7_PHYPA (Uncharacterized protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1JVF7_PHYPA)

HSP 1 Score: 107 bits (266), Expect = 1.480e-23
Identity = 50/88 (56.82%), Postives = 65/88 (73.86%), Query Frame = 0

Query:   95 LDELLVTMQSSVNRDLIDAVAVDFCYVNSKNSRKKLVKALYAVGRHKLVLLPYYARLAATLNKCMPDIGPALVELLEGEFRFLKKKKD 182
            LD LL  +   V+RDLID + VDFCY+NSK+SRKKLV+ L+ V R  L L+PYY+R+ ATL+ CM D+ P +++LLE EF FL  KKD
Sbjct:  518 LDSLLQRLPGCVSRDLIDQLTVDFCYLNSKSSRKKLVRTLFNVPRSSLELIPYYSRMIATLSTCMKDVAPMILQLLEEEFNFLMNKKD 605

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BLAST of mRNA_M-pyrifera_M_contig114630.3046.1 vs. uniprot
Match: D8SDL0_SELML (Uncharacterized protein n=4 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8SDL0_SELML)

HSP 1 Score: 106 bits (265), Expect = 1.990e-23
Identity = 52/88 (59.09%), Postives = 66/88 (75.00%), Query Frame = 0

Query:   95 LDELLVTMQSSVNRDLIDAVAVDFCYVNSKNSRKKLVKALYAVGRHKLVLLPYYARLAATLNKCMPDIGPALVELLEGEFRFLKKKKD 182
            LD LL  +  +V+RDLID + VDFCYVNSK++RKKLV+ L+ V R  L LLP+Y+R+ ATL+ CM DI P L++LLE EF FL  KKD
Sbjct:  436 LDSLLQRLPGAVSRDLIDQLTVDFCYVNSKSNRKKLVRTLFNVPRTSLELLPHYSRMVATLSTCMKDITPMLLQLLEDEFNFLINKKD 523

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BLAST of mRNA_M-pyrifera_M_contig114630.3046.1 vs. uniprot
Match: A0A2R6W0M4_MARPO (Uncharacterized protein n=1 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6W0M4_MARPO)

HSP 1 Score: 106 bits (265), Expect = 2.000e-23
Identity = 50/88 (56.82%), Postives = 65/88 (73.86%), Query Frame = 0

Query:   95 LDELLVTMQSSVNRDLIDAVAVDFCYVNSKNSRKKLVKALYAVGRHKLVLLPYYARLAATLNKCMPDIGPALVELLEGEFRFLKKKKD 182
            LD LL  +   V+RDLID + VDFCY+NSK++RKKLV+ALY V R  L L+PYY+R+ ATL+ CM D+ P +++ LE EF FL  KKD
Sbjct:  477 LDSLLQRLPGCVSRDLIDQLTVDFCYLNSKSNRKKLVRALYTVPRTSLELIPYYSRMIATLSTCMKDVAPMILQWLEEEFNFLMTKKD 564

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BLAST of mRNA_M-pyrifera_M_contig114630.3046.1 vs. uniprot
Match: UPI000C1D598A (regulator of nonsense transcripts UPF2-like n=1 Tax=Olea europaea var. sylvestris TaxID=158386 RepID=UPI000C1D598A)

HSP 1 Score: 100 bits (248), Expect = 2.130e-23
Identity = 50/88 (56.82%), Postives = 64/88 (72.73%), Query Frame = 0

Query:   95 LDELLVTMQSSVNRDLIDAVAVDFCYVNSKNSRKKLVKALYAVGRHKLVLLPYYARLAATLNKCMPDIGPALVELLEGEFRFLKKKKD 182
            +D LL  + S V+ DLID + V+FCY+NSK +RKKLV+AL+ V R  L LLPYY+R+ ATL+ CM DI   L++LLE EF FL  KKD
Sbjct:   46 IDALLQRLPSCVSCDLIDQLTVEFCYLNSKANRKKLVRALFNVPRTSLELLPYYSRMVATLSTCMKDISSMLLQLLEEEFNFLINKKD 133

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig114630.3046.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig114630.3046.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A2P6NN14_9EUKA	1.900e-27	61.70	Uncharacterized protein n=1 Tax=Planoprotostelium ...	[more]
L8HJ34_ACACA	6.600e-27	61.36	MIF4G domain containing protein n=1 Tax=Acanthamoe...	[more]
A0A388KY68_CHABU	3.170e-24	55.91	Uncharacterized protein n=1 Tax=Chara braunii TaxI...	[more]
A0A175YN50_DAUCS	1.080e-23	59.09	Uncharacterized protein n=1 Tax=Daucus carota subs...	[more]
A0A397V1T3_9GLOM	1.460e-23	60.23	Armadillo-type protein (Fragment) n=3 Tax=Gigaspor...	[more]
A0A7J7CI92_TRIWF	1.470e-23	57.95	Regulator of nonsense transcripts 2 isoform 1 n=1 ...	[more]
A0A2K1JVF7_PHYPA	1.480e-23	56.82	Uncharacterized protein n=2 Tax=Physcomitrium pate...	[more]
D8SDL0_SELML	1.990e-23	59.09	Uncharacterized protein n=4 Tax=Selaginella moelle...	[more]
A0A2R6W0M4_MARPO	2.000e-23	56.82	Uncharacterized protein n=1 Tax=Marchantia polymor...	[more]
UPI000C1D598A	2.130e-23	56.82	regulator of nonsense transcripts UPF2-like n=1 Ta...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016021	MIF4G-like domain superfamily	GENE3D	1.25.40.180		coord: 68..182 e-value: 1.6E-9 score: 39.1
IPR039762	Nonsense-mediated mRNA decay protein Nmd2/UPF2	PANTHER	PTHR12839	NONSENSE-MEDIATED MRNA DECAY PROTEIN 2 UP-FRAMESHIFT SUPPRESSOR 2	coord: 2..182
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 94..182

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig114630	contig	M-pyrifera_M_contig114630:26..571 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig114630.3046.1	mRNA_M-pyrifera_M_contig114630.3046.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig114630 2..571 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig114630.3046.1 ID=prot_M-pyrifera_M_contig114630.3046.1|Name=mRNA_M-pyrifera_M_contig114630.3046.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=182bp
MLPAVLFGEAPDTCQQEGGEEVIPAEGDTAGGELEGADTEDVSPPPNDEG
VEDAEEEEARASSSLMDDDDEDGQEGEEDTTAAAVAAGLARKNKLDELLV
TMQSSVNRDLIDAVAVDFCYVNSKNSRKKLVKALYAVGRHKLVLLPYYAR
LAATLNKCMPDIGPALVELLEGEFRFLKKKKD

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR016021	MIF4-like_sf
IPR039762	Nmd2/UPF2
IPR016024	ARM-type_fold