prot_M-pyrifera_M_contig1144.3005.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig1144.3005.1
Unique Nameprot_M-pyrifera_M_contig1144.3005.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length725
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig1144.3005.1 vs. uniprot
Match: A0A6H5L2V4_9PHAE (MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2V4_9PHAE)

HSP 1 Score: 233 bits (593), Expect = 5.510e-62
Identity = 251/644 (38.98%), Postives = 307/644 (47.67%), Query Frame = 0 
Query:   64 LDPSLREEPWTEKEDQILHDAQLRLGGDRWADIAKLLTGRTENCVKSHWHATFQKKMKKKSVPQGTLSDGLGAGMDDIDDGGDGETGGGSATPRPGG--------GNDGEADYDSFALDVVPGGGXXXGVCS-PAGRVGGPESPL---------------PPGAQKMRGVAXXXXXXXXXXXXXXXXXXXIEAGASPAVVPLSSFPLGASSASSSVEGLGRWQVRLSDEQPLMGQSVIGSLTRKETATLQTA---YEELNKKLEGNSKVGG-SARSIGIVSG--------TEDGDXXXXXXXXXXXXXXLAPPMCAAETQAPLQGKGQAPFERAASVHATSEPPPPLPAPASSVGSQGGCDSVTGKRTRPRLFVNTNVDP-GMYIG-HDPH--------------------------GSEGTNAASAXXXXXXXXXXXXXRVSHA---SSVPYGCPPPGMGSXXXXXXXXXXXXXXXYASGMGNVVNQPMAQMHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDYPIAIPGTSVRRYMHVQLLLALMSAPGLKVVAPAKVSWDRLGYYPVDAVFGPPGPGPLPTSPPRLTPT--VLPPLPVTSPTLLADPDSPA----PPKRARSVKGP 634
            LDPS +  PWTE+E  I+HDA LRLG +RWA+IAKLLTGRT++ VK++W+ T  K + +++     +  G G G  D     D    G S+T  P G           G   YD    DVVP      G CS P G V G E  L               PP        A                   +E+ + PA+VP S+  LG ++A ++V+   RWQV   +++ ++ Q+ IGSLT+ E    + A   Y EL+KK+ G +  G  S    G V G        ++  +              L P   A  T + L+   QA    A +V  T    PPLPAPASSVGS+     +  KR RPRLFVNTNVD  GMYIG H+                            G E  +A + XXXXXXXXXXXX R  HA   S+VP+GCPP G+GS    XXXXXXXXXXX                                                             D+PIAIPGTSVRRYMHVQLLLALMSAPGL+VV PA+VSWDRLGYYPVDAVFGPP PG  P  PPRLTPT   +P +P  SP      DS A    P KRARS  GP
Sbjct:    2 LDPSQKNAPWTEEEITIIHDAHLRLG-NRWAEIAKLLTGRTDSAVKNYWYTTAHKNIGRQNKE---IRGGGGDGGSDPSRSRDAGARG-SSTIDPIGPRGESVATNGGGPGFYDDPKPDVVPREAVIAGGCSAPVGHVEGGECQLQPVVAGLGVCGGIGPPPAMAVATAAAVATHGQGMPPVGAATAAPGVESPSPPALVPSSASTLG-TTAPAAVDENNRWQVSDDNKRGVVNQTAIGSLTKTEATDPRKAAACYGELDKKVAGENGDGSASTGDAGAVHGWHLATSAASDAVEEAPGHRKDGSCGVVLGPGGVAPATSSLLE---QASVVNAHAVSNTVTKSPPLPAPASSVGSRDRDQQIGSKRPRPRLFVNTNVDAAGMYIGGHEQQQHXXXXXXXXXXXXXXXXXXXXXXXXGFE-ADANAXXXXXXXXXXXXXARAPHAVSMSAVPFGCPP-GLGSSAAEXXXXXXXXXXXXXXXXXXXXG--------------------------------------------------GDHPIAIPGTSVRRYMHVQLLLALMSAPGLRVVTPARVSWDRLGYYPVDAVFGPPKPGARPPGPPRLTPTSTAIPTMPGLSPRSQFGSDSAAAALVPSKRARSGTGP 584
[Close]
BLAST of mRNA_M-pyrifera_M_contig1144.3005.1 vs. uniprot
Match: D7FNQ9_ECTSI (Transcription factor C-MYB n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNQ9_ECTSI)

HSP 1 Score: 186 bits (472), Expect = 1.990e-46
Identity = 132/342 (38.60%), Postives = 179/342 (52.34%), Query Frame = 0 
Query:    3 TRVGGQVTERRPWSRSEDEAIARMVGELGTDQWSSVAGNLCAEIPGALRTAKDCGTRWFHHLDPSLREEPWTEKEDQILHDAQLRLGGDRWADIAKLLTGRTENCVKSHWHATFQKKMKKKSVPQGTLSDGLGAGMDDIDDGGDGE-TGGGSATPRPGGG-----NDGEAD-YDSFALDVVPGGGXXXGVCS-PAGRVGGPESPL---------------PPGAQKMRGVAXXXXXXXXXXXXXXXXXXXIEAGASPAVVPLSSFPLGASSASSSVEGLGRWQVRLSDEQPLMGQSVIGSLTRKETATLQTA---YEELNKKLEGNSKVGG-SARSIGIVSG 317
            T +G +  + RPWSR EDEAIARMV E G  +WS +AGNL  E+ G LRT K C  RW H LDPS +  PWTE+E+ I+HDA LRLG +RW++IAKLLTGRT++ VK++W+ T  K + ++++    +  G G G  D    GD E TG  +  P   GG     N G +  YD    D+VPG     G CS P G V G E  L               PP        A                   +E+ + PA+VP  +  LG ++A  +V+G  RWQV   +++ ++ Q+ IGSLT+ E    + A   Y EL+KK+ G +  G  S    G V G
Sbjct:  111 THLGARAPDLRPWSRMEDEAIARMVVERGIKRWSVIAGNLYVEVAGTLRTGKQCKARWQHMLDPSQKNAPWTEEEENIIHDAHLRLG-NRWSEIAKLLTGRTDSAVKNYWYTTAHKNIGRQNME---IRGGDGDGRSDPSRSGDTEATGSSNINPIGPGGESVATNGGASGFYDDPKPDIVPGEAGIAGGCSAPVGHVEGGECQLQPVVAGLGVCGGIGPPPAMAVATAAAVATHGQGMPPVGAATAAPGVESSSPPALVPSLASTLG-TTAPPAVDGNNRWQVSDDNKRGVVSQTAIGSLTKTEATNPRKAAACYGELDKKVAGENGDGSASTGDAGAVHG 447
[Close]
BLAST of mRNA_M-pyrifera_M_contig1144.3005.1 vs. uniprot
Match: A0A835YS16_9STRA (Homeodomain-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS16_9STRA)

HSP 1 Score: 148 bits (373), Expect = 1.780e-38
Identity = 65/110 (59.09%), Postives = 87/110 (79.09%), Query Frame = 0 
Query:   11 ERRPWSRSEDEAIARMVGELGTDQWSSVAGNLCAEIPGALRTAKDCGTRWFHHLDPSLREEPWTEKEDQILHDAQLRLGGDRWADIAKLLTGRTENCVKSHWHATFQKKM 120
            ERR W+R EDEAI R+V E G  +WS VA +L  EI G +R+ K C TRW +HLDPSLR+EPWT +E+Q+++DAQ RLG ++WA+IAKLLTGRT+N +K+HW++T +K M
Sbjct:    1 ERRSWTRCEDEAIVRLVAEHGVKRWSLVAQHLNMEIVGVVRSGKQCRTRWLNHLDPSLRKEPWTSEEEQVIYDAQRRLG-NKWAEIAKLLTGRTDNAIKNHWYSTMRKNM 109
[Close]
BLAST of mRNA_M-pyrifera_M_contig1144.3005.1 vs. uniprot
Match: A0A835ZPI2_9STRA (Homeodomain-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZPI2_9STRA)

HSP 1 Score: 146 bits (368), Expect = 1.020e-37
Identity = 60/113 (53.10%), Postives = 90/113 (79.65%), Query Frame = 0 
Query:   11 ERRPWSRSEDEAIARMVGELGTDQWSSVAGNLCAEIPGALRTAKDCGTRWFHHLDPSLREEPWTEKEDQILHDAQLRLGGDRWADIAKLLTGRTENCVKSHWHATFQKKMKKK 123
            ERR WS+ ED+AI+ +V   G  +WS +A NL  E+ GA+R+ K C TRW +HLDPSLR +PWT++E+Q++++AQ RLG ++WA+IAKLLTGRT+N +K+HW++T +K M+++
Sbjct:    1 ERRAWSKREDDAISGLVTHYGVKRWSLIAQNLSKEVEGAVRSGKQCRTRWLNHLDPSLRRDPWTDEEEQVIYNAQRRLG-NKWAEIAKLLTGRTDNAIKNHWYSTMRKNMRRR 112
[Close]
BLAST of mRNA_M-pyrifera_M_contig1144.3005.1 vs. uniprot
Match: A0A7S2G8M0_9STRA (Hypothetical protein (Fragment) n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G8M0_9STRA)

HSP 1 Score: 142 bits (357), Expect = 2.430e-33
Identity = 58/116 (50.00%), Postives = 88/116 (75.86%), Query Frame = 0 
Query:    7 GQVTERRPWSRSEDEAIARMVGELGTDQWSSVAGNLCAEIPGALRTAKDCGTRWFHHLDPSLREEPWTEKEDQILHDAQLRLGGDRWADIAKLLTGRTENCVKSHWHATFQKKMKK 122
            G+  ERR W+R ED+AI R+V   GT +W+ +A  L  EIPG  R+ K C TRW +HLDP++++EPW++ E+ I++DAQ RLG ++WA+IAKLL GRT+N +K+HW++T ++ M++
Sbjct:   45 GERPERRAWTRKEDDAIVRLVKRHGTKRWACIAQELNTEIPGVFRSGKQCRTRWLNHLDPAIKKEPWSDTEEHIIYDAQHRLG-NKWAEIAKLLPGRTDNAIKNHWYSTMRRNMRR 159
[Close]
BLAST of mRNA_M-pyrifera_M_contig1144.3005.1 vs. uniprot
Match: A0A7S2ST59_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2ST59_9STRA)

HSP 1 Score: 141 bits (355), Expect = 8.220e-33
Identity = 61/130 (46.92%), Postives = 92/130 (70.77%), Query Frame = 0 
Query:   11 ERRPWSRSEDEAIARMVGELGTDQWSSVAGNLCAEIPGALRTAKDCGTRWFHHLDPSLREEPWTEKEDQILHDAQLRLGGDRWADIAKLLTGRTENCVKSHWHATFQKKMKKKSVPQGTLSDGLGAGMDD 140
            ERR WSR ED+AI R+V   GT +W+ +A  L  EI G  R+ K C TRW +HLDP++++EPW+E E++I++DAQ RLG ++WA+IAKLL GRT+N +K+HW++T ++ M++ +       +G   G +D
Sbjct:   38 ERRAWSRKEDDAIVRLVNRHGTKRWAVIAQELNGEISGVFRSGKQCRTRWLNHLDPAIKKEPWSEHEERIIYDAQQRLG-NKWAEIAKLLPGRTDNAIKNHWYSTMRRNMRRLAKEISMDDEGAEGGAED 166
[Close]
BLAST of mRNA_M-pyrifera_M_contig1144.3005.1 vs. uniprot
Match: A0A3F2RS30_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RS30_9STRA)

HSP 1 Score: 141 bits (356), Expect = 3.120e-32
Identity = 59/123 (47.97%), Postives = 90/123 (73.17%), Query Frame = 0 
Query:    5 VGGQVTERRPWSRSEDEAIARMVGELGTDQWSSVAGNLCAEIPGALRTAKDCGTRWFHHLDPSLREEPWTEKEDQILHDAQLRLGGDRWADIAKLLTGRTENCVKSHWHATFQKKMKKKSVPQ 127
             GG   ERR W+R ED+AI R+V E GT +WS ++ +L  E  G  RT K C TRW +HLDP+++++PWT +E+QI+ DAQ RLG ++WA+I+KLL GRT+N +K+HW+++ ++ M++ +  Q
Sbjct:   21 AGGSTYERRAWTRKEDDAIIRLVEEYGTKRWSVISDHLNGENHGTERTGKQCRTRWLNHLDPTIKKDPWTTEEEQIIEDAQTRLG-NKWAEISKLLPGRTDNAIKNHWYSSMRRTMRRMAKQQ 142
[Close]
BLAST of mRNA_M-pyrifera_M_contig1144.3005.1 vs. uniprot
Match: A0A3M6VGP6_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VGP6_9STRA)

HSP 1 Score: 140 bits (354), Expect = 4.720e-32
Identity = 59/121 (48.76%), Postives = 90/121 (74.38%), Query Frame = 0 
Query:    7 GQVTERRPWSRSEDEAIARMVGELGTDQWSSVAGNLCAEIPGALRTAKDCGTRWFHHLDPSLREEPWTEKEDQILHDAQLRLGGDRWADIAKLLTGRTENCVKSHWHATFQKKMKKKSVPQ 127
            G   ERR W+R EDEAI R+V E GT +WS ++ +L +E  G  RT K C TRW +HLDP+++++PWT +E+QI+ DAQ RLG ++WA+I+KLL GRT+N +K+HW+++ ++ M++ +  Q
Sbjct:   16 GSTYERRAWTRKEDEAIIRLVDEYGTKRWSVISDHLNSENHGTERTGKQCRTRWLNHLDPTIKKDPWTAEEEQIIEDAQTRLG-NKWAEISKLLPGRTDNAIKNHWYSSMRRTMRRMAKQQ 135
[Close]
BLAST of mRNA_M-pyrifera_M_contig1144.3005.1 vs. uniprot
Match: A0A484E484_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E484_BRELC)

HSP 1 Score: 140 bits (353), Expect = 5.410e-32
Identity = 59/123 (47.97%), Postives = 91/123 (73.98%), Query Frame = 0 
Query:    5 VGGQVTERRPWSRSEDEAIARMVGELGTDQWSSVAGNLCAEIPGALRTAKDCGTRWFHHLDPSLREEPWTEKEDQILHDAQLRLGGDRWADIAKLLTGRTENCVKSHWHATFQKKMKKKSVPQ 127
            V G   ERR W+R ED+AI R+V E GT +WS ++ +L +E  G  RT K C TRW +HLDP+++++PWT +E+QI+ DAQ RLG ++WA+I+KLL GRT+N +K+HW+++ ++ M++ +  Q
Sbjct:   13 VRGSTYERRAWTRKEDDAIIRLVEEYGTKRWSVISDHLNSENHGTERTGKQCRTRWLNHLDPTIKKDPWTTEEEQIIEDAQTRLG-NKWAEISKLLPGRTDNAIKNHWYSSMRRTMRRMAKQQ 134
[Close]
BLAST of mRNA_M-pyrifera_M_contig1144.3005.1 vs. uniprot
Match: H3HDP9_PHYRM (Uncharacterized protein n=6 Tax=Phytophthora TaxID=4783 RepID=H3HDP9_PHYRM)

HSP 1 Score: 139 bits (351), Expect = 6.460e-32
Identity = 60/129 (46.51%), Postives = 93/129 (72.09%), Query Frame = 0 
Query:    7 GQVTERRPWSRSEDEAIARMVGELGTDQWSSVAGNLCAEIPGALRTAKDCGTRWFHHLDPSLREEPWTEKEDQILHDAQLRLGGDRWADIAKLLTGRTENCVKSHWHATFQKKMKKKSVPQG-TLSDGL 134
            G   ERR W+R ED+AI R+V E GT +WS ++ +L  E  G  RT K C TRW +HLDP+++++PWT +E+Q++ DAQ RLG ++WA+I+KLL GRT+N +K+HW+++ ++ M++ +  Q  TL  G+
Sbjct:   15 GSTYERRAWTRKEDDAIIRLVEEYGTKRWSVISDHLNGENHGTERTGKQCRTRWLNHLDPTIKKDPWTAEEEQVIEDAQTRLG-NKWAEISKLLPGRTDNAIKNHWYSSMRRTMRRMAKQQNKTLGQGV 142
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig1144.3005.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L2V4_9PHAE5.510e-6238.98MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
D7FNQ9_ECTSI1.990e-4638.60Transcription factor C-MYB n=1 Tax=Ectocarpus sili... [more]
A0A835YS16_9STRA1.780e-3859.09Homeodomain-like protein (Fragment) n=1 Tax=Tribon... [more]
A0A835ZPI2_9STRA1.020e-3753.10Homeodomain-like protein (Fragment) n=1 Tax=Tribon... [more]
A0A7S2G8M0_9STRA2.430e-3350.00Hypothetical protein (Fragment) n=2 Tax=Dictyocha ... [more]
A0A7S2ST59_9STRA8.220e-3346.92Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A3F2RS30_9STRA3.120e-3247.97Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]
A0A3M6VGP6_9STRA4.720e-3248.76Uncharacterized protein n=2 Tax=Peronospora effusa... [more]
A0A484E484_BRELC5.410e-3247.97Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
H3HDP9_PHYRM6.460e-3246.51Uncharacterized protein n=6 Tax=Phytophthora TaxID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 705..724
NoneNo IPR availableGENE3D1.10.10.60coord: 71..132
e-value: 3.4E-14
score: 54.6
NoneNo IPR availableGENE3D1.10.10.60coord: 12..69
e-value: 1.5E-13
score: 52.4
NoneNo IPR availablePANTHERPTHR45614:SF53coord: 46..386
IPR001005SANT/Myb domainSMARTSM00717santcoord: 69..118
e-value: 5.6E-8
score: 42.5
coord: 11..66
e-value: 7.8E-8
score: 42.0
IPR001005SANT/Myb domainPFAMPF00249Myb_DNA-bindingcoord: 71..113
e-value: 5.6E-10
score: 39.3
coord: 12..63
e-value: 1.5E-6
score: 28.3
IPR015495Myb-like transcription factorPANTHERPTHR45614FAMILY NOT NAMEDcoord: 46..386
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 65..120
score: 18.792
IPR017877Myb-like domainPROSITEPS50090MYB_LIKEcoord: 7..64
score: 9.558
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 12..112

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig1144contigM-pyrifera_M_contig1144:19810..25561 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig1144.3005.1mRNA_M-pyrifera_M_contig1144.3005.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig1144 19574..25588 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig1144.3005.1 ID=prot_M-pyrifera_M_contig1144.3005.1|Name=mRNA_M-pyrifera_M_contig1144.3005.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=725bp
MHTRVGGQVTERRPWSRSEDEAIARMVGELGTDQWSSVAGNLCAEIPGAL
RTAKDCGTRWFHHLDPSLREEPWTEKEDQILHDAQLRLGGDRWADIAKLL
TGRTENCVKSHWHATFQKKMKKKSVPQGTLSDGLGAGMDDIDDGGDGETG
GGSATPRPGGGNDGEADYDSFALDVVPGGGGGGGVCSPAGRVGGPESPLP
PGAQKMRGVAGLAGSSAAHVGPCAPAAPAIEAGASPAVVPLSSFPLGASS
ASSSVEGLGRWQVRLSDEQPLMGQSVIGSLTRKETATLQTAYEELNKKLE
GNSKVGGSARSIGIVSGTEDGDGSVGVGAAAAAAAALAPPMCAAETQAPL
QGKGQAPFERAASVHATSEPPPPLPAPASSVGSQGGCDSVTGKRTRPRLF
VNTNVDPGMYIGHDPHGSEGTNAASAAIAAARSAARAASRVSHASSVPYG
CPPPGMGSSAAAAASAAAEAAARYASGMGNVVNQPMAQMHHHRPHHPHHH
FHQHHQQQQVQHQHMGGVARRGGGRGGGGGAGGGDYPIAIPGTSVRRYMH
VQLLLALMSAPGLKVVAPAKVSWDRLGYYPVDAVFGPPGPGPLPTSPPRL
TPTVLPPLPVTSPTLLADPDSPAPPKRARSVKGPDGGSVHDAIGIAIGGG
GGGGGGGGGGGGGGGEGGGGGGGGGGGGGGGGAREAAGRRXXXXAEKGTE
RTRAGRGWEEEEEEEEEEEEEEEE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR015495Myb-like_TF
IPR017930Myb_dom
IPR017877Myb-like_dom
IPR009057Homeobox-like_sf