prot_M-pyrifera_M_contig114353.2997.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig114353.2997.1
Unique Nameprot_M-pyrifera_M_contig114353.2997.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length176
Homology
BLAST of mRNA_M-pyrifera_M_contig114353.2997.1 vs. uniprot
Match: A0A3C0HSC0_9ACTN (Ribonuclease PH n=6 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A3C0HSC0_9ACTN)

HSP 1 Score: 297 bits (761), Expect = 4.310e-100
Identity = 153/175 (87.43%), Postives = 158/175 (90.29%), Query Frame = 0
Query:    1 PERVNRERRGAKGRTQEIERLIGRSLRAVTDMRALGEHSIRLDCDVLQADGGTRTASICGAFVALHDACERLVQGGAIAKNPLVTECAAISVGIVDGSPVLDLPYPEDSTADVDFNVIMTGTGQLIEVQGTAEGNTFDRAELDALLDLAEGGIATITAAQRETLATAPSPRSPGR 175
            PER+NRERRGAKGRTQEIERLIGRSLRAVTDMRALGE SIRLDCDVLQADGGTRTASICGA+VALHDACERLVQ G I  NPL TEC AISVGIVDG PVLDLPYPEDSTADVDFNVIM G GQLIEVQGTAEGNTF RAELD LLDLAEGG+ATI  AQR  LA AP+PR+PGR
Sbjct:   75 PERINRERRGAKGRTQEIERLIGRSLRAVTDMRALGETSIRLDCDVLQADGGTRTASICGAYVALHDACERLVQAGHIPANPLTTECVAISVGIVDGRPVLDLPYPEDSTADVDFNVIMDGNGQLIEVQGTAEGNTFSRAELDVLLDLAEGGVATIAEAQRAVLADAPAPRTPGR 249          
BLAST of mRNA_M-pyrifera_M_contig114353.2997.1 vs. uniprot
Match: A0A5Q2RLF6_9ACTN (Ribonuclease PH n=1 Tax=Actinomarinicola tropica TaxID=2789776 RepID=A0A5Q2RLF6_9ACTN)

HSP 1 Score: 236 bits (603), Expect = 4.650e-76
Identity = 124/173 (71.68%), Postives = 137/173 (79.19%), Query Frame = 0
Query:    1 PERVNRERRGAK--GRTQEIERLIGRSLRAVTDMRALGEHSIRLDCDVLQADGGTRTASICGAFVALHDACERLVQGGAIAKNPLVTECAAISVGIVDGSPVLDLPYPEDSTADVDFNVIMTGTGQLIEVQGTAEGNTFDRAELDALLDLAEGGIATITAAQRETLATAPSPR 171
            PER+ RE +  K  GRTQEI+RLIGR+LRAVTDM ALGE  I LDCDVLQADGGTRTASICGA+VALHDAC RLV  G +A NP+   CAAISVGI+DG P LDLPY EDS A+VD NV+MTG G  +EVQGTAEG  + RAELDALL LAEGGIATI   QRE +A AP PR
Sbjct:   78 PERIRREVKDGKPSGRTQEIQRLIGRALRAVTDMEALGERQILLDCDVLQADGGTRTASICGAWVALHDACSRLVATGRLAANPITDACAAISVGIIDGQPRLDLPYEEDSRAEVDMNVVMTGAGGFVEVQGTAEGAPYSRAELDALLGLAEGGIATIVGMQREVVAAAPDPR 250          
BLAST of mRNA_M-pyrifera_M_contig114353.2997.1 vs. uniprot
Match: A0A7X6ART5_9ACTN (Ribonuclease PH (Fragment) n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X6ART5_9ACTN)

HSP 1 Score: 238 bits (606), Expect = 5.620e-76
Identity = 123/165 (74.55%), Postives = 136/165 (82.42%), Query Frame = 0
Query:    1 PERVNRERRGAKGRTQEIERLIGRSLRAVTDMRALGEHSIRLDCDVLQADGGTRTASICGAFVALHDACERLVQGGAIAKNPLVTECAAISVGIVDGSPVLDLPYPEDSTADVDFNVIMTGTGQLIEVQGTAEGNTFDRAELDALLDLAEGGIATITAAQRETLA 165
            PERV R R G  GR+QEI+RLIGRSLRAVTD++ALGE SI +DCDVLQADGGTRTASICGA+VALHDAC RLVQ G +  +PLVTECAAISVGIVDG P+LDLPY ED  ADVDFNV+MTGTG LIEVQGTAEG  F R +LD +LDLA  GI+ I  AQR  LA
Sbjct:   74 PERVRRPRTGPNGRSQEIQRLIGRSLRAVTDLKALGEVSIDIDCDVLQADGGTRTASICGAYVALHDACSRLVQAGLMEADPLVTECAAISVGIVDGMPMLDLPYREDVAADVDFNVVMTGTGNLIEVQGTAEGEPFSREQLDQILDLAAKGISEINEAQRAVLA 238          
BLAST of mRNA_M-pyrifera_M_contig114353.2997.1 vs. uniprot
Match: A0A6B1AVU3_9ACTN (Ribonuclease PH n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B1AVU3_9ACTN)

HSP 1 Score: 231 bits (590), Expect = 2.790e-74
Identity = 124/172 (72.09%), Postives = 132/172 (76.74%), Query Frame = 0
Query:    1 PERVNRERRGAKGRTQEIERLIGRSLRAVTDMRALGEHSIRLDCDVLQADGGTRTASICGAFVALHDACERLVQGGAIAKNPLVTECAAISVGIVDGSPVLDLPYPEDSTADVDFNVIMTGTGQLIEVQGTAEGNTFDRAELDALLDLAEGGIATITAAQRETLATAPSPRS 172
            PER+   RR   GR QEI+RLIGRSLR V DM ALGE SI +DCDVL ADGGTRTASICG +VALHDACERLV  G I  NPL TECAAISVGIVDG P+LDLPY EDSTADVDFNV+MTG G LIEVQGTAEG  F R EL A+LDLA  GI  I  AQR  L T P PR+
Sbjct:   65 PERI---RRRTSGRDQEIQRLIGRSLRCVIDMAALGERSITVDCDVLSADGGTRTASICGGYVALHDACERLVLAGQIPGNPLFTECAAISVGIVDGRPLLDLPYLEDSTADVDFNVVMTGDGSLIEVQGTAEGKAFSRDELTAMLDLAAKGITEINEAQRAVLRTPPEPRA 233          
BLAST of mRNA_M-pyrifera_M_contig114353.2997.1 vs. uniprot
Match: A0A3S0DTR6_9ACTN (Ribonuclease PH n=2 Tax=Acidimicrobiia TaxID=84992 RepID=A0A3S0DTR6_9ACTN)

HSP 1 Score: 226 bits (575), Expect = 7.050e-72
Identity = 118/175 (67.43%), Postives = 138/175 (78.86%), Query Frame = 0
Query:    1 PERVNRERRGAKGRTQEIERLIGRSLRAVTDMRALGEHSIRLDCDVLQADGGTRTASICGAFVALHDACERLVQGGAIAKNPLVTECAAISVGIVDGSPVLDLPYPEDSTADVDFNVIMTGTGQLIEVQGTAEGNTFDRAELDALLDLAEGGIATITAAQRETLATAPSPRSPGR 175
            PER+ RE +G KGRTQEI+RLIGR+LR+V DM+ALGE  I +DCDVLQADGGTRTASI GA++ALHD   R+VQ G +++ PL  E AAISVG+VDG PVLDLPY EDSTA+ D NV+MTG G  +EVQGTAEG  F R ELD+LL LAEGGI  I A QR+ LA AP+PR  GR
Sbjct:   71 PERIRRETKGPKGRTQEIQRLIGRALRSVCDMKALGERQILIDCDVLQADGGTRTASISGAYLALHDCLTRVVQAGLLSEVPLYDELAAISVGVVDGVPVLDLPYTEDSTAETDMNVVMTGKGLFVEVQGTAEGAPFSRDELDSLLGLAEGGIRRIHALQRKYLAEAPTPRPIGR 245          
BLAST of mRNA_M-pyrifera_M_contig114353.2997.1 vs. uniprot
Match: A0A7Y2GKH5_9ACTN (Ribonuclease PH n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2GKH5_9ACTN)

HSP 1 Score: 225 bits (573), Expect = 1.170e-71
Identity = 118/171 (69.01%), Postives = 136/171 (79.53%), Query Frame = 0
Query:    1 PERVNRERRGAKGRTQEIERLIGRSLRAVTDMRALGEHSIRLDCDVLQADGGTRTASICGAFVALHDACERLVQGGAIAKNPLVTECAAISVGIVDGSPVLDLPYPEDSTADVDFNVIMTGTGQLIEVQGTAEGNTFDRAELDALLDLAEGGIATITAAQRETLATAPSPR 171
            PERV   RR   GRTQEI+RLIGRSLR+V D  A+GE S+ +DCDVLQADGGTRTASICG +VALHDA ERL+QGG +  NP++TECAAISVGIVDG P+LDLPY ED+ A+VD NV++ G+G  IEVQGTAEG TF RAELDALL LAE G+A I  AQR+ L T P  R
Sbjct:   71 PERV---RRRVSGRTQEIQRLIGRSLRSVVDFEAMGEVSVIVDCDVLQADGGTRTASICGGYVALHDALERLIQGGQLGANPIMTECAAISVGIVDGEPLLDLPYIEDANAEVDMNVVIVGSGAYIEVQGTAEGATFSRAELDALLGLAEKGVAEIIDAQRDLLQTPPELR 238          
BLAST of mRNA_M-pyrifera_M_contig114353.2997.1 vs. uniprot
Match: A0A2E7NHQ5_9BACT (Ribonuclease PH n=6 Tax=root TaxID=1 RepID=A0A2E7NHQ5_9BACT)

HSP 1 Score: 219 bits (557), Expect = 3.140e-69
Identity = 111/165 (67.27%), Postives = 130/165 (78.79%), Query Frame = 0
Query:    8 RRGAKGRTQEIERLIGRSLRAVTDMRALGEHSIRLDCDVLQADGGTRTASICGAFVALHDACERLVQGGAIAKNPLVTECAAISVGIVDGSPVLDLPYPEDSTADVDFNVIMTGTGQLIEVQGTAEGNTFDRAELDALLDLAEGGIATITAAQRETLATAPSPRS 172
            RR   GR+QEI+RLI RSLRAV D+  LGE  + +DCDV+QADGGTRTASICG F+ALHDA ERLV  G +A NPL  + AA+SVGIV+G P LDLPY EDSTA+VDFNV+MTG+G+ +EVQGTAEG  FDRA+LDAL+DLA GGIA I  AQR  LA  P  R+
Sbjct:   75 RRRVSGRSQEIQRLIARSLRAVCDLEVLGEREVTVDCDVIQADGGTRTASICGGFIALHDALERLVVSGDLAANPLTDQLAAVSVGIVEGEPRLDLPYVEDSTAEVDFNVVMTGSGRFVEVQGTAEGEAFDRAQLDALVDLATGGIAEIAEAQRALLADPPPART 239          
BLAST of mRNA_M-pyrifera_M_contig114353.2997.1 vs. uniprot
Match: A0A2E9XE16_9ACTN (Ribonuclease PH n=3 Tax=Actinobacteria TaxID=201174 RepID=A0A2E9XE16_9ACTN)

HSP 1 Score: 218 bits (556), Expect = 4.590e-69
Identity = 115/167 (68.86%), Postives = 132/167 (79.04%), Query Frame = 0
Query:    2 ERVNRERRGAK--GRTQEIERLIGRSLRAVTDMRALGEHSIRLDCDVLQADGGTRTASICGAFVALHDACERLVQGGAIAKNPLVTECAAISVGIVDGSPVLDLPYPEDSTADVDFNVIMTGTGQLIEVQGTAEGNTFDRAELDALLDLAEGGIATITAAQRETLAT 166
            ERVNRE +  K  GRT EIERLIGRSLRA+ DM+ LGE  + +DCDVLQADGGTRTASICG FVALHDAC  L++ G I  +PL   CAAISVGIVDG+P LDLPY EDSTA VD NV+MTG+G+ +EVQGTAEG+ FDR+ELDAL  LAE GI+ I A Q+E L T
Sbjct:   72 ERVNRESKKGKQKGRTLEIERLIGRSLRAICDMKLLGEREVTVDCDVLQADGGTRTASICGGFVALHDACTSLMERGLIKVHPLTDFCAAISVGIVDGTPKLDLPYVEDSTASVDMNVVMTGSGRFVEVQGTAEGDPFDRSELDALTSLAEKGISEIIAMQKEILGT 238          
BLAST of mRNA_M-pyrifera_M_contig114353.2997.1 vs. uniprot
Match: A0A0G3V456_9ACTN (Ribonuclease PH n=6 Tax=root TaxID=1 RepID=A0A0G3V456_9ACTN)

HSP 1 Score: 218 bits (556), Expect = 5.730e-69
Identity = 117/174 (67.24%), Postives = 135/174 (77.59%), Query Frame = 0
Query:    1 PERVNRERRGAK--GRTQEIERLIGRSLRAVTDMRALGEHSIRLDCDVLQADGGTRTASICGAFVALHDACERLVQGGAIAKNPLVTECAAISVGIVDGSPVLDLPYPEDSTADVDFNVIMTGTGQLIEVQGTAEGNTFDRAELDALLDLAEGGIATITAAQRETLATAPSPRS 172
            PERV+RE    K  GRTQEI+RLIGRSLRAVTD+ ALGE  I +DCD LQADGGTRTA+ICG ++ALHDACER+VQ G +  NP+   CAA+SVGIV   P LDL Y EDS+A+VD NV+MTG G+ IEVQGTAEG  F R ELD+LL LAEGGIA + A QRE L+  PSPRS
Sbjct:   73 PERVSREAAKGKQSGRTQEIQRLIGRSLRAVTDLVALGEFQITVDCDALQADGGTRTAAICGGYLALHDACERMVQQGRLRINPVGELCAAVSVGIVGALPSLDLDYVEDSSAEVDMNVVMTGDGKFIEVQGTAEGAAFSRGELDSLLGLAEGGIAELFAMQREMLSVPPSPRS 246          
BLAST of mRNA_M-pyrifera_M_contig114353.2997.1 vs. uniprot
Match: A0A7W0QXI1_9ACTN (Ribonuclease PH n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7W0QXI1_9ACTN)

HSP 1 Score: 218 bits (556), Expect = 5.730e-69
Identity = 118/176 (67.05%), Postives = 131/176 (74.43%), Query Frame = 0
Query:    2 ERVNRERRGAK--GRTQEIERLIGRSLRAVTDMRALGEHSIRLDCDVLQADGGTRTASICGAFVALHDACERLVQGGAIAKNPLVTECAAISVGIVDGSPVLDLPYPEDSTADVDFNVIMTGTGQLIEVQGTAEGNTFDRAELDALLDLAEGGIATITAAQRETLATAPSPRSPGR 175
            ER+ RE    K  GRTQEI+RLIGRSLR+V DM  LGE  + +DCDVLQADGGTRTA+ICG +VALHDA  RLVQ G I  NPL   C AISVGIV G+ +LDLPY EDS A VD NV+MTG GQ IEVQGTAEG +F R ELD LL LAE GIA I   Q E LAT P+PR+PGR
Sbjct:   72 ERIGREAAKGKQSGRTQEIQRLIGRSLRSVCDMSVLGERQVIVDCDVLQADGGTRTAAICGGYVALHDAFTRLVQNGRITANPLTDSCGAISVGIVGGTALLDLPYEEDSRAGVDMNVVMTGAGQFIEVQGTAEGKSFSREELDRLLGLAEVGIAEIGRLQTELLATPPTPRAPGR 247          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig114353.2997.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3C0HSC0_9ACTN4.310e-10087.43Ribonuclease PH n=6 Tax=Acidimicrobiaceae bacteriu... [more]
A0A5Q2RLF6_9ACTN4.650e-7671.68Ribonuclease PH n=1 Tax=Actinomarinicola tropica T... [more]
A0A7X6ART5_9ACTN5.620e-7674.55Ribonuclease PH (Fragment) n=1 Tax=Actinomycetia b... [more]
A0A6B1AVU3_9ACTN2.790e-7472.09Ribonuclease PH n=1 Tax=Acidimicrobiaceae bacteriu... [more]
A0A3S0DTR6_9ACTN7.050e-7267.43Ribonuclease PH n=2 Tax=Acidimicrobiia TaxID=84992... [more]
A0A7Y2GKH5_9ACTN1.170e-7169.01Ribonuclease PH n=1 Tax=Acidimicrobiales bacterium... [more]
A0A2E7NHQ5_9BACT3.140e-6967.27Ribonuclease PH n=6 Tax=root TaxID=1 RepID=A0A2E7N... [more]
A0A2E9XE16_9ACTN4.590e-6968.86Ribonuclease PH n=3 Tax=Actinobacteria TaxID=20117... [more]
A0A0G3V456_9ACTN5.730e-6967.24Ribonuclease PH n=6 Tax=root TaxID=1 RepID=A0A0G3V... [more]
A0A7W0QXI1_9ACTN5.730e-6967.05Ribonuclease PH n=1 Tax=Acidimicrobiia bacterium T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027408PNPase/RNase PH domain superfamilyGENE3D3.30.230.70coord: 1..167
e-value: 2.9E-38
score: 133.2
IPR002381Ribonuclease PH, bacterial-typeTIGRFAMTIGR01966TIGR01966coord: 3..164
e-value: 1.6E-67
score: 225.1
IPR015847Exoribonuclease, phosphorolytic domain 2PFAMPF03725RNase_PH_Ccoord: 88..150
e-value: 9.9E-11
score: 41.5
IPR001247Exoribonuclease, phosphorolytic domain 1PFAMPF01138RNase_PHcoord: 6..68
e-value: 3.1E-7
score: 31.0
NoneNo IPR availablePANTHERPTHR11953:SF2EXOSOME COMPLEX COMPONENT MTR3coord: 7..164
NoneNo IPR availablePANTHERPTHR11953EXOSOME COMPLEX COMPONENTcoord: 7..164
IPR018336Ribonuclease PH, conserved sitePROSITEPS01277RIBONUCLEASE_PHcoord: 44..56
IPR036345Exoribonuclease, PH domain 2 superfamilySUPERFAMILY55666Ribonuclease PH domain 2-likecoord: 79..164
IPR020568Ribosomal protein S5 domain 2-type foldSUPERFAMILY54211Ribosomal protein S5 domain 2-likecoord: 5..109

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig114353contigM-pyrifera_M_contig114353:3..530 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig114353.2997.1mRNA_M-pyrifera_M_contig114353.2997.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig114353 3..530 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig114353.2997.1 ID=prot_M-pyrifera_M_contig114353.2997.1|Name=mRNA_M-pyrifera_M_contig114353.2997.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=176bp
PERVNRERRGAKGRTQEIERLIGRSLRAVTDMRALGEHSIRLDCDVLQAD
GGTRTASICGAFVALHDACERLVQGGAIAKNPLVTECAAISVGIVDGSPV
LDLPYPEDSTADVDFNVIMTGTGQLIEVQGTAEGNTFDRAELDALLDLAE
GGIATITAAQRETLATAPSPRSPGR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027408PNPase/RNase_PH_dom_sf
IPR002381RNase_PH_bac-type
IPR015847ExoRNase_PH_dom2
IPR001247ExoRNase_PH_dom1
IPR018336RNase_PH_CS
IPR036345ExoRNase_PH_dom2_sf
IPR020568Ribosomal_S5_D2-typ_fold