prot_M-pyrifera_M_contig11432.2987.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig11432.2987.1
Unique Nameprot_M-pyrifera_M_contig11432.2987.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length85
Homology
BLAST of mRNA_M-pyrifera_M_contig11432.2987.1 vs. uniprot
Match: A0A7S2F148_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F148_9STRA)

HSP 1 Score: 119 bits (298), Expect = 1.610e-32
Identity = 53/85 (62.35%), Postives = 67/85 (78.82%), Query Frame = 0
Query:    1 LSASYKLWNQYLGERRAAVEGKCVTDPACQIVVNAHERALVHLHKMPRLWVDYLTFVVGLGLGTRSRRTFDRALQALPITQHDKV 85
            L  SYKLW QYL ER + ++GKC+T    QIVVN  ERALVHLHKMPR+W+DY + ++ L  G+ +RRTFDRALQALP+TQHD++
Sbjct:   35 LPRSYKLWRQYLSERTSELKGKCITSKRYQIVVNTFERALVHLHKMPRIWLDYCSLLMHLKRGSLTRRTFDRALQALPVTQHDRI 119          
BLAST of mRNA_M-pyrifera_M_contig11432.2987.1 vs. uniprot
Match: I6M4B7_KRYMA (XAB2 (Fragment) n=1 Tax=Kryptolebias marmoratus TaxID=37003 RepID=I6M4B7_KRYMA)

HSP 1 Score: 116 bits (291), Expect = 1.020e-31
Identity = 53/85 (62.35%), Postives = 65/85 (76.47%), Query Frame = 0
Query:    1 LSASYKLWNQYLGERRAAVEGKCVTDPACQIVVNAHERALVHLHKMPRLWVDYLTFVVGLGLGTRSRRTFDRALQALPITQHDKV 85
            L  SYKLW  YL ERR  V+GKC+T+PA + V N HERALV +HKMPR+W+DY  F+V     TRSRRTFDRAL+ALP+TQH ++
Sbjct:   56 LPGSYKLWYNYLRERRKQVKGKCITEPAFEEVNNCHERALVVMHKMPRIWIDYCQFLVSQSKITRSRRTFDRALRALPVTQHPRI 140          
BLAST of mRNA_M-pyrifera_M_contig11432.2987.1 vs. uniprot
Match: A0A0S7LQ32_9TELE (SYF1 (Fragment) n=1 Tax=Poeciliopsis prolifica TaxID=188132 RepID=A0A0S7LQ32_9TELE)

HSP 1 Score: 117 bits (293), Expect = 2.590e-31
Identity = 54/85 (63.53%), Postives = 64/85 (75.29%), Query Frame = 0
Query:    1 LSASYKLWNQYLGERRAAVEGKCVTDPACQIVVNAHERALVHLHKMPRLWVDYLTFVVGLGLGTRSRRTFDRALQALPITQHDKV 85
            L  SYKLW  YL ERR  V+GKC+TDP  + V N HERALV +HKMPR+W+DY  FVV     TRSRRTFDRAL+ALP+TQH ++
Sbjct:   89 LPGSYKLWYNYLRERRKQVKGKCITDPTYEEVNNCHERALVFMHKMPRIWIDYCQFVVSQCKITRSRRTFDRALRALPVTQHPRI 173          
BLAST of mRNA_M-pyrifera_M_contig11432.2987.1 vs. uniprot
Match: A0A7S2W251_9STRA (Glycine--tRNA ligase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W251_9STRA)

HSP 1 Score: 121 bits (304), Expect = 2.950e-30
Identity = 55/85 (64.71%), Postives = 68/85 (80.00%), Query Frame = 0
Query:    1 LSASYKLWNQYLGERRAAVEGKCVTDPACQIVVNAHERALVHLHKMPRLWVDYLTFVVGLGLGTRSRRTFDRALQALPITQHDKV 85
            L  SYKLW QYL ER+A ++GK VTD    I+VN +ERALVHLHKMPR+W+DY   ++ L  GTR+RRTFDRALQALP+TQHD++
Sbjct:   55 LPRSYKLWRQYLQERQAQIKGKSVTDKRNTILVNTYERALVHLHKMPRIWLDYCELLMNLQRGTRTRRTFDRALQALPVTQHDRI 139          
BLAST of mRNA_M-pyrifera_M_contig11432.2987.1 vs. uniprot
Match: A0A8C1DYQ7_CYPCA (XPA binding protein 2 n=3 Tax=Cyprinus carpio TaxID=7962 RepID=A0A8C1DYQ7_CYPCA)

HSP 1 Score: 118 bits (295), Expect = 2.490e-29
Identity = 56/85 (65.88%), Postives = 65/85 (76.47%), Query Frame = 0
Query:    1 LSASYKLWNQYLGERRAAVEGKCVTDPACQIVVNAHERALVHLHKMPRLWVDYLTFVVGLGLGTRSRRTFDRALQALPITQHDKV 85
            L  SYKLW  YL ERR  V+GKCVTDPA + V N HERALV +HKMPR+W+DY  F+V     TRSRRTFDRAL+ALPITQH ++
Sbjct:   62 LPGSYKLWYNYLRERRKQVKGKCVTDPAYEEVNNCHERALVFMHKMPRVWIDYCQFMVSQCKITRSRRTFDRALRALPITQHPRI 146          
BLAST of mRNA_M-pyrifera_M_contig11432.2987.1 vs. uniprot
Match: A0A087X627_POEFO (XPA binding protein 2 n=1 Tax=Poecilia formosa TaxID=48698 RepID=A0A087X627_POEFO)

HSP 1 Score: 119 bits (297), Expect = 2.590e-29
Identity = 55/85 (64.71%), Postives = 65/85 (76.47%), Query Frame = 0
Query:    1 LSASYKLWNQYLGERRAAVEGKCVTDPACQIVVNAHERALVHLHKMPRLWVDYLTFVVGLGLGTRSRRTFDRALQALPITQHDKV 85
            L  SYKLW  YL ERR  V+GKC+TDPA + V N HERALV +HKMPR+W+DY  FVV     TRSRRTFDRAL+ALP+TQH ++
Sbjct:   59 LPGSYKLWYNYLRERRKQVKGKCITDPAYEEVNNCHERALVFMHKMPRIWIDYCQFVVSQCKITRSRRTFDRALRALPVTQHPRI 143          
BLAST of mRNA_M-pyrifera_M_contig11432.2987.1 vs. uniprot
Match: A0A8B9H3R0_ASTMX (XPA binding protein 2 n=1 Tax=Astyanax mexicanus TaxID=7994 RepID=A0A8B9H3R0_ASTMX)

HSP 1 Score: 118 bits (296), Expect = 3.490e-29
Identity = 55/85 (64.71%), Postives = 65/85 (76.47%), Query Frame = 0
Query:    1 LSASYKLWNQYLGERRAAVEGKCVTDPACQIVVNAHERALVHLHKMPRLWVDYLTFVVGLGLGTRSRRTFDRALQALPITQHDKV 85
            L  SYKLW  YL ERR  V+GKCVTDPA + + N HERALV +HKMPR+W+DY  F+V     TRSRRTFDRAL+ALPITQH ++
Sbjct:   55 LPGSYKLWYNYLRERRKQVKGKCVTDPAYEEINNCHERALVFMHKMPRIWLDYCQFIVSQCKITRSRRTFDRALRALPITQHSRI 139          
BLAST of mRNA_M-pyrifera_M_contig11432.2987.1 vs. uniprot
Match: A0A498N3W7_LABRO (Pre-mRNA-splicing factor SYF1 n=1 Tax=Labeo rohita TaxID=84645 RepID=A0A498N3W7_LABRO)

HSP 1 Score: 118 bits (296), Expect = 3.580e-29
Identity = 56/85 (65.88%), Postives = 65/85 (76.47%), Query Frame = 0
Query:    1 LSASYKLWNQYLGERRAAVEGKCVTDPACQIVVNAHERALVHLHKMPRLWVDYLTFVVGLGLGTRSRRTFDRALQALPITQHDKV 85
            L  SYKLW  YL ERR  V+GKCVTDPA + V N HERALV +HKMPR+W+DY  F+V     TRSRRTFDRAL+ALPITQH ++
Sbjct:  601 LPGSYKLWYNYLRERRKQVKGKCVTDPAYEEVNNCHERALVFMHKMPRIWIDYCQFMVSQCKITRSRRTFDRALRALPITQHPRI 685          
BLAST of mRNA_M-pyrifera_M_contig11432.2987.1 vs. uniprot
Match: A0A4W4H7T8_ELEEL (XPA binding protein 2 n=1 Tax=Electrophorus electricus TaxID=8005 RepID=A0A4W4H7T8_ELEEL)

HSP 1 Score: 118 bits (295), Expect = 4.810e-29
Identity = 55/85 (64.71%), Postives = 65/85 (76.47%), Query Frame = 0
Query:    1 LSASYKLWNQYLGERRAAVEGKCVTDPACQIVVNAHERALVHLHKMPRLWVDYLTFVVGLGLGTRSRRTFDRALQALPITQHDKV 85
            L  SYKLW  YL ERR  V+GKCVTDPA + + N HERALV +HKMPR+W+DY  F+V     TRSRRTFDRAL+ALPITQH ++
Sbjct:   59 LPGSYKLWYNYLRERRKQVKGKCVTDPAYEEINNCHERALVFMHKMPRIWLDYCQFMVSQRKITRSRRTFDRALRALPITQHSRI 143          
BLAST of mRNA_M-pyrifera_M_contig11432.2987.1 vs. uniprot
Match: W5UE93_ICTPU (Pre-mRNA-splicing factor SYF1 n=2 Tax=Ictaluridae TaxID=7996 RepID=W5UE93_ICTPU)

HSP 1 Score: 118 bits (295), Expect = 4.810e-29
Identity = 54/85 (63.53%), Postives = 65/85 (76.47%), Query Frame = 0
Query:    1 LSASYKLWNQYLGERRAAVEGKCVTDPACQIVVNAHERALVHLHKMPRLWVDYLTFVVGLGLGTRSRRTFDRALQALPITQHDKV 85
            L  SYKLW  YL ERR  ++GKCVTDPA + V N HERALV +HKMPR+W+DY  F+V     TRSRRTFDRAL+ALP+TQH ++
Sbjct:   59 LPGSYKLWYNYLRERRKQIKGKCVTDPAYEEVNNCHERALVFMHKMPRIWLDYCQFIVSQCKITRSRRTFDRALRALPVTQHSRI 143          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig11432.2987.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S2F148_9STRA1.610e-3262.35Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
I6M4B7_KRYMA1.020e-3162.35XAB2 (Fragment) n=1 Tax=Kryptolebias marmoratus Ta... [more]
A0A0S7LQ32_9TELE2.590e-3163.53SYF1 (Fragment) n=1 Tax=Poeciliopsis prolifica Tax... [more]
A0A7S2W251_9STRA2.950e-3064.71Glycine--tRNA ligase n=1 Tax=Rhizochromulina marin... [more]
A0A8C1DYQ7_CYPCA2.490e-2965.88XPA binding protein 2 n=3 Tax=Cyprinus carpio TaxI... [more]
A0A087X627_POEFO2.590e-2964.71XPA binding protein 2 n=1 Tax=Poecilia formosa Tax... [more]
A0A8B9H3R0_ASTMX3.490e-2964.71XPA binding protein 2 n=1 Tax=Astyanax mexicanus T... [more]
A0A498N3W7_LABRO3.580e-2965.88Pre-mRNA-splicing factor SYF1 n=1 Tax=Labeo rohita... [more]
A0A4W4H7T8_ELEEL4.810e-2964.71XPA binding protein 2 n=1 Tax=Electrophorus electr... [more]
W5UE93_ICTPU4.810e-2963.53Pre-mRNA-splicing factor SYF1 n=2 Tax=Ictaluridae ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..85
e-value: 3.3E-8
score: 34.8
NoneNo IPR availablePANTHERPTHR11246:SF5PRE-MRNA-SPLICING FACTOR SYF1coord: 2..85
NoneNo IPR availablePANTHERPTHR11246PRE-MRNA SPLICING FACTORcoord: 2..85

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig11432contigM-pyrifera_M_contig11432:8005..9131 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig11432.2987.1mRNA_M-pyrifera_M_contig11432.2987.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig11432 8005..9131 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig11432.2987.1 ID=prot_M-pyrifera_M_contig11432.2987.1|Name=mRNA_M-pyrifera_M_contig11432.2987.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=85bp
LSASYKLWNQYLGERRAAVEGKCVTDPACQIVVNAHERALVHLHKMPRLW
VDYLTFVVGLGLGTRSRRTFDRALQALPITQHDKV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf