prot_M-pyrifera_M_contig114291.2975.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig114291.2975.1
Unique Nameprot_M-pyrifera_M_contig114291.2975.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length190
Homology
BLAST of mRNA_M-pyrifera_M_contig114291.2975.1 vs. uniprot
Match: UPI001F3E1E56 (ABC transporter permease n=1 Tax=Rhodohalobacter sp. 614A TaxID=2908649 RepID=UPI001F3E1E56)

HSP 1 Score: 280 bits (715), Expect = 1.420e-86
Identity = 136/190 (71.58%), Postives = 162/190 (85.26%), Query Frame = 0
Query:    1 GVGKTVTFGANGDNPNTQEIVGVVSDFHFATVKHEVEPLIMFYSNSLPIVSVKVGVESLSSAIPQIEEIWSSLLVNTPFDYTFLDDTFAQQYNTEQTLAKIIRHFSILAIVIAAVGLFILSVFTVQQRRKEIGIRKVLGSTTQGISLLLGKDFLKWILVSNLIGLPLAWYFLSGWLSNFKYRIELDFIPF 190
            G  KTVTFGA  DNP T  IVGVV DFHFATV+HEVEPLIMFYS +LP +S+K+  ++L+S + +IE +W S L N  F++ FLD++FAQQYNTEQTL+++IRHFS+LAI IAA+GLFILSVFTVQQRRKEIGIRKVLGSTT GISLLL KDFLKWIL+SN+I LP+AWYFL  WL+NF+YRI+LDF PF
Sbjct:  572 GTDKTVTFGATSDNPTTLSIVGVVGDFHFATVRHEVEPLIMFYSRALPTLSIKLDTQNLNSTLSEIENVWKSFLTNRSFEFDFLDESFAQQYNTEQTLSQMIRHFSLLAIAIAAIGLFILSVFTVQQRRKEIGIRKVLGSTTGGISLLLSKDFLKWILLSNIISLPIAWYFLREWLANFRYRIDLDFYPF 761          
BLAST of mRNA_M-pyrifera_M_contig114291.2975.1 vs. uniprot
Match: A0A2D8CJ19_9BACT (Uncharacterized protein n=3 Tax=Balneolaceae TaxID=1813606 RepID=A0A2D8CJ19_9BACT)

HSP 1 Score: 277 bits (709), Expect = 1.080e-85
Identity = 136/190 (71.58%), Postives = 161/190 (84.74%), Query Frame = 0
Query:    1 GVGKTVTFGANGDNPNTQEIVGVVSDFHFATVKHEVEPLIMFYSNSLPIVSVKVGVESLSSAIPQIEEIWSSLLVNTPFDYTFLDDTFAQQYNTEQTLAKIIRHFSILAIVIAAVGLFILSVFTVQQRRKEIGIRKVLGSTTQGISLLLGKDFLKWILVSNLIGLPLAWYFLSGWLSNFKYRIELDFIPF 190
            G  KT+TFGAN +NP T  IVGVV DFHFATV+HEVEPLIMFY  +LP VS+K+  +++S+ + ++EEIWSS L N  F+Y FLDDTFAQQYNTEQTL+++IRHFSILAI IAA+GLFILSVFTVQQRRKEIGIRKVLGSTT GI +LL KDFLKWIL+SN+I LP+AWY L  WL+NF+YRI+LD  PF
Sbjct:  572 GTNKTLTFGANSENPTTLNIVGVVEDFHFATVRHEVEPLIMFYGEALPTVSLKIDDQNISNTLTEVEEIWSSFLPNRSFEYNFLDDTFAQQYNTEQTLSQMIRHFSILAISIAAIGLFILSVFTVQQRRKEIGIRKVLGSTTTGIGVLLSKDFLKWILLSNIISLPVAWYLLREWLANFRYRIDLDVYPF 761          
BLAST of mRNA_M-pyrifera_M_contig114291.2975.1 vs. uniprot
Match: A0A4U6DBI4_9BACT (FtsX-like permease family protein n=4 Tax=Dyadobacter TaxID=120831 RepID=A0A4U6DBI4_9BACT)

HSP 1 Score: 167 bits (422), Expect = 1.430e-44
Identity = 86/184 (46.74%), Postives = 123/184 (66.85%), Query Frame = 0
Query:    2 VGKTVTFGANGDNPNTQEIVGVVSDFHFATVKHEVEPLIMFYSNSLPIVSVKVGVESLSSAIPQIEEIWSSLLVNTPFDYTFLDDTFAQQYNTEQTLAKIIRHFSILAIVIAAVGLFILSVFTVQQRRKEIGIRKVLGSTTQGISLLLGKDFLKWILVSNLIGLPLAWYFLSGWLSNFKYRIEL 185
            VG+ +T   N  N N  EI+GVV DFHF ++K ++E L M   +S  IVS+K+G      AI  I ++W+SL  N P  YTF+D  F++ Y+    L +I   F+ILAI++A++GLF LS F V+QRRKEIGIRKVLG++ Q I  LL ++FL  +L+S +I  P+AWY +  WL ++KYRI++
Sbjct:  592 VGQYITNQTN--NGNKLEIIGVVEDFHFESMKDDIEGLCMSLGSSPSIVSIKIGTSDTKGAIQSISKVWNSLAPNQPIRYTFMDQNFSKMYDDVNRLGQIFSSFAILAIIVASLGLFALSAFMVEQRRKEIGIRKVLGASVQSILGLLTRNFLVLVLISAIIASPIAWYIMQKWLQDYKYRIDI 773          
BLAST of mRNA_M-pyrifera_M_contig114291.2975.1 vs. uniprot
Match: A0A6C0GQT6_9BACT (FtsX-like permease family protein n=1 Tax=Rhodocytophaga rosea TaxID=2704465 RepID=A0A6C0GQT6_9BACT)

HSP 1 Score: 166 bits (421), Expect = 1.830e-44
Identity = 79/185 (42.70%), Postives = 119/185 (64.32%), Query Frame = 0
Query:    2 VGKTVTFGANGDNPNTQEIVGVVSDFHFATVKHEVEPLIMFYSNSLPIVSVKVGVESLSSAIPQIEEIWSSLLVNTPFDYTFLDDTFAQQYNTEQTLAKIIRHFSILAIVIAAVGLFILSVFTVQQRRKEIGIRKVLGSTTQGISLLLGKDFLKWILVSNLIGLPLAWYFLSGWLSNFKYRIELD 186
            +GKT+      +     ++VG+V DFHFAT++H+VEP+ M Y+     +++K+   ++   +  I + W  +   TP++Y FLD  FA  Y +EQT A +  HF++LA+ IA +GL  LS FT QQRRKEI IRKVLG+    I  LL KDFL+ +LV+ +I +P+AWYF+  WL +F YR +++
Sbjct:  573 IGKTIRLETGQNQFTAYQVVGLVKDFHFATIRHKVEPVFMLYNKDNSQLAIKISTANVPGTLDFIGQTWKRINAETPYEYNFLDADFANLYRSEQTFATMFSHFTVLALFIAVLGLLGLSAFTAQQRRKEISIRKVLGADVSQIIFLLSKDFLQLVLVAVIIAIPIAWYFMRKWLEDFAYRTDMN 757          
BLAST of mRNA_M-pyrifera_M_contig114291.2975.1 vs. uniprot
Match: A0A7X4FIZ5_9BACT (FtsX-like permease family protein n=2 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A7X4FIZ5_9BACT)

HSP 1 Score: 162 bits (410), Expect = 5.960e-43
Identity = 81/168 (48.21%), Postives = 119/168 (70.83%), Query Frame = 0
Query:   20 IVGVVSDFHFATVKHEVEPLIMFYSNSLPI-VSVKVGVESLSSAIPQIEEIWSSLLVNTPFDYTFLDDTFAQQYNTEQTLAKIIRHFSILAIVIAAVGLFILSVFTVQQRRKEIGIRKVLGSTTQGISLLLGKDFLKWILVSNLIGLPLAWYFLSGWLSNFKYRIELD 186
            I+GVVSDFH  ++K E+EPL++ Y +  P+ +++++   +++ AI  +EE W  L  N PF YTFLD  +A+ YN EQ ++ + + FS LAI+IA +GLF L+ FT QQR KEIGIRK+LG++  GI  LL KDFLK +L++NL+  P+A+Y ++ WL +F YRI L 
Sbjct:  588 IIGVVSDFHIGSLKQEIEPLVLPYLHRSPMYLAIRLHPGNVAEAISAVEETWKKLAPNQPFSYTFLDQDYARLYNREQQMSHVFQIFSGLAILIACLGLFGLAAFTTQQRTKEIGIRKILGASVSGIVCLLSKDFLKLVLIANLVAWPIAYYAMNQWLQSFAYRINLS 755          
BLAST of mRNA_M-pyrifera_M_contig114291.2975.1 vs. uniprot
Match: UPI001687BB3A (ABC transporter permease n=1 Tax=Spirosoma profusum TaxID=2771354 RepID=UPI001687BB3A)

HSP 1 Score: 162 bits (410), Expect = 6.050e-43
Identity = 81/186 (43.55%), Postives = 120/186 (64.52%), Query Frame = 0
Query:    2 VGKTVTFGANGDNPN---TQEIVGVVSDFHFATVKHEVEPLIMFYSNSLPIVSVKVGVESLSSAIPQIEEIWSSLLVNTPFDYTFLDDTFAQQYNTEQTLAKIIRHFSILAIVIAAVGLFILSVFTVQQRRKEIGIRKVLGSTTQGISLLLGKDFLKWILVSNLIGLPLAWYFLSGWLSNFKYRIE 184
            +GKT+     G  PN   +  ++G+V DFHFATV+H+VEPL M YS     + VK+   +    +  IE+ W  +   TPF+Y+FLD+ F + Y +EQ  A +  HF++LA+ IA +GLF L+ FT +QR+KEIGIR+VLG+ T  +  LL KDF+K +L++ ++  PLAWY ++ WL  F YR +
Sbjct:  573 IGKTIRL-QTGPTPNDLTSYNVIGLVKDFHFATVRHKVEPLFMLYSKINGQLIVKMNTANAPQTLSFIEQTWKQINPETPFEYSFLDEDFGKLYRSEQAFATMFSHFTVLALFIALLGLFGLAAFTAEQRQKEIGIRRVLGAETGSLLYLLSKDFVKLVLIAFVVATPLAWYLMNRWLEGFAYRTD 757          
BLAST of mRNA_M-pyrifera_M_contig114291.2975.1 vs. uniprot
Match: UPI000FFC6971 (ABC transporter permease n=1 Tax=Larkinella soli TaxID=1770527 RepID=UPI000FFC6971)

HSP 1 Score: 162 bits (410), Expect = 6.050e-43
Identity = 81/191 (42.41%), Postives = 123/191 (64.40%), Query Frame = 0
Query:    2 VGKTVTF--GANGDNPNTQEIVGVVSDFHFATVKHEVEPLIMFYSNSLPIVSVKVGVESLSSAIPQIEEIWSSLLVNTPFDYTFLDDTFAQQYNTEQTLAKIIRHFSILAIVIAAVGLFILSVFTVQQRRKEIGIRKVLGSTTQGISLLLGKDFLKWILVSNLIGLPLAWYFLSGWLSNFKYRIELDFIPF 190
            VGKTV    G    +    ++VG+V DFHFAT++H+VEPL M ++ +   ++VK+   +    +  IE+ W  +   TP+D++FLD+ F + Y +EQ  A +  HF+ILA+ IA +GLF L+ FT +QRRKEIGIR+VLG+ T  +  LL KDF++ +LV+ ++  PLAWY +  WL+ F YR +   + F
Sbjct:  573 VGKTVRLQTGPTPTDLTAYKVVGLVKDFHFATIRHKVEPLFMLFNRNNGQLAVKINTANAPETLAFIEQTWKRINPETPYDFSFLDEDFGKLYRSEQAFATMFSHFTILALFIAVLGLFGLAAFTAEQRRKEIGIRRVLGAETGSLLFLLSKDFVRLVLVAFVVASPLAWYLMDRWLAGFAYRTDQSAVLF 763          
BLAST of mRNA_M-pyrifera_M_contig114291.2975.1 vs. uniprot
Match: A0A3N5Q0Q4_9BACT (FtsX-like permease family protein (Fragment) n=1 Tax=Ignavibacteriales bacterium TaxID=2049428 RepID=A0A3N5Q0Q4_9BACT)

HSP 1 Score: 156 bits (394), Expect = 1.570e-42
Identity = 86/193 (44.56%), Postives = 129/193 (66.84%), Query Frame = 0
Query:    2 VGKTVTFGANGDNPNTQEIVGVVSDFHFATVKHEVEPLIMF----YSNSLPIVSVKVGVESLSSAIPQIEEIWSSLLVNTPFDYTFLDDTFAQQYNTEQTLAKIIRHFSILAIVIAAVGLFILSVFTVQQRRKEIGIRKVLGSTTQGISLLLGKDFLKWILVSNLIGLPLAWYFLSGWLSNFKYRIELDFIPF 190
            VGK   F  NG NP T  +VGVV DFHFA+++H++EP+++     ++N+    +V++   ++S A+  IEE W+ +    PF+Y+FLDD F + Y +EQ  A++I  F+ LAI IA +GLF L+ +  +QR KEIGIRKVLG++   I LL  K F+  +LV+N+I  PLA+YF+S WL +F+YRI + +  F
Sbjct:  194 VGKK--FNPNGQNPLT--VVGVVKDFHFASMRHKIEPMMIVNQAQFNNTA---AVRINAGNISRAVSAIEEAWNKINPGRPFEYSFLDDEFNELYKSEQNFAELIVGFTWLAIFIACLGLFGLASYMTEQRTKEIGIRKVLGASVGNILLLTTKQFILLVLVANIIAWPLAYYFMSNWLLDFQYRINIGYETF 379          
BLAST of mRNA_M-pyrifera_M_contig114291.2975.1 vs. uniprot
Match: A0A6C0GR84_9BACT (FtsX-like permease family protein n=1 Tax=Rhodocytophaga rosea TaxID=2704465 RepID=A0A6C0GR84_9BACT)

HSP 1 Score: 160 bits (405), Expect = 3.070e-42
Identity = 80/179 (44.69%), Postives = 124/179 (69.27%), Query Frame = 0
Query:   13 DNPNTQEIVGVVSDFHFATVKHEVEPLIM-FYSNSLPIVSVKVGVESLSSAIPQIEEIWSSLLVNTPFDYTFLDDTFAQQYNTEQTLAKIIRHFSILAIVIAAVGLFILSVFTVQQRRKEIGIRKVLGSTTQGISLLLGKDFLKWILVSNLIGLPLAWYFLSGWLSNFKYRIELDFIPF 190
            D+    +++GVV DFH+ ++  ++EPL++  Y ++   + VK+  E++ + +  +E  W+ L  N PF+YTFLD+ FA++Y +EQ  +K+   F++L+I IA +GLF L+ FT  QR KEIGIRKVLG++  GI  LL KDFLK +L+S +I +PLAWY +S WL +F YRI++D+  F
Sbjct:  597 DSLKRGKVIGVVKDFHYKSLHQKIEPLVLHIYPSAFEDIVVKIRPENMKATLAFLENKWTKLDANWPFEYTFLDEQFARKYESEQIFSKVFITFTLLSIFIACLGLFGLASFTAGQRSKEIGIRKVLGASVPGIVFLLSKDFLKLVLLSLVIAVPLAWYAMSSWLEDFAYRIDMDWWVF 775          
BLAST of mRNA_M-pyrifera_M_contig114291.2975.1 vs. uniprot
Match: A0A3P1BGE6_9BACT (ABC transporter permease n=2 Tax=Larkinella TaxID=332157 RepID=A0A3P1BGE6_9BACT)

HSP 1 Score: 159 bits (403), Expect = 5.540e-42
Identity = 79/191 (41.36%), Postives = 122/191 (63.87%), Query Frame = 0
Query:    2 VGKTVTF--GANGDNPNTQEIVGVVSDFHFATVKHEVEPLIMFYSNSLPIVSVKVGVESLSSAIPQIEEIWSSLLVNTPFDYTFLDDTFAQQYNTEQTLAKIIRHFSILAIVIAAVGLFILSVFTVQQRRKEIGIRKVLGSTTQGISLLLGKDFLKWILVSNLIGLPLAWYFLSGWLSNFKYRIELDFIPF 190
            +GK V    G N  +     +VG+V DFHFAT++H+VEPL M Y+ +   ++VK+   +    +  IE+ W  +   TP+DY+F+D  F + Y +EQ  A +  HF++LA+ IA +GLF L+ FT +QRRKEIGIR+VLG+ T  +  LL ++F+K ++++ +I  PLAWY ++ WL+ F YR +   I F
Sbjct:  573 IGKIVRLPSGPNPTDATPYTVVGLVKDFHFATIRHKVEPLFMLYNKNNNQLAVKINTANAPETLAFIEKTWKQVNPETPYDYSFMDADFGKLYRSEQAFATMFSHFTVLALFIAVLGLFGLAAFTAEQRRKEIGIRRVLGAETGSLLYLLSREFIKLVVIAFVIASPLAWYLMNRWLNGFAYRTDQSAILF 763          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig114291.2975.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001F3E1E561.420e-8671.58ABC transporter permease n=1 Tax=Rhodohalobacter s... [more]
A0A2D8CJ19_9BACT1.080e-8571.58Uncharacterized protein n=3 Tax=Balneolaceae TaxID... [more]
A0A4U6DBI4_9BACT1.430e-4446.74FtsX-like permease family protein n=4 Tax=Dyadobac... [more]
A0A6C0GQT6_9BACT1.830e-4442.70FtsX-like permease family protein n=1 Tax=Rhodocyt... [more]
A0A7X4FIZ5_9BACT5.960e-4348.21FtsX-like permease family protein n=2 Tax=Gemmatim... [more]
UPI001687BB3A6.050e-4343.55ABC transporter permease n=1 Tax=Spirosoma profusu... [more]
UPI000FFC69716.050e-4342.41ABC transporter permease n=1 Tax=Larkinella soli T... [more]
A0A3N5Q0Q4_9BACT1.570e-4244.56FtsX-like permease family protein (Fragment) n=1 T... [more]
A0A6C0GR84_9BACT3.070e-4244.69FtsX-like permease family protein n=1 Tax=Rhodocyt... [more]
A0A3P1BGE6_9BACT5.540e-4241.36ABC transporter permease n=2 Tax=Larkinella TaxID=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR30572MEMBRANE COMPONENT OF TRANSPORTER-RELATEDcoord: 2..180
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 173..190
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 126..152
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 105..125
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 153..172
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..104
NoneNo IPR availableTMHMMTMhelixcoord: 157..179
NoneNo IPR availableTMHMMTMhelixcoord: 101..123

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig114291contigM-pyrifera_M_contig114291:3..572 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig114291.2975.1mRNA_M-pyrifera_M_contig114291.2975.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig114291 3..572 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig114291.2975.1 ID=prot_M-pyrifera_M_contig114291.2975.1|Name=mRNA_M-pyrifera_M_contig114291.2975.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=190bp
GVGKTVTFGANGDNPNTQEIVGVVSDFHFATVKHEVEPLIMFYSNSLPIV
SVKVGVESLSSAIPQIEEIWSSLLVNTPFDYTFLDDTFAQQYNTEQTLAK
IIRHFSILAIVIAAVGLFILSVFTVQQRRKEIGIRKVLGSTTQGISLLLG
KDFLKWILVSNLIGLPLAWYFLSGWLSNFKYRIELDFIPF
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