prot_M-pyrifera_M_contig114138.2941.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig114138.2941.1
Unique Nameprot_M-pyrifera_M_contig114138.2941.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length46
Homology
BLAST of mRNA_M-pyrifera_M_contig114138.2941.1 vs. uniprot
Match: D8LS75_ECTSI (tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS75_ECTSI)

HSP 1 Score: 89.4 bits (220), Expect = 1.030e-19
Identity = 38/46 (82.61%), Postives = 45/46 (97.83%), Query Frame = 0
Query:    1 VRDWLREGCDCVVIAGKYDPLAAVEAMLPHLTPSRPFAVYSEFVEV 46
            VRDWLR+GCDC+VIA K+DP+AAV+AMLPHLTPSRPFA+YSEF+EV
Sbjct:  357 VRDWLRQGCDCLVIACKFDPIAAVDAMLPHLTPSRPFAIYSEFIEV 402          
BLAST of mRNA_M-pyrifera_M_contig114138.2941.1 vs. uniprot
Match: H3GKY1_PHYRM (tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GKY1_PHYRM)

HSP 1 Score: 56.2 bits (134), Expect = 2.460e-8
Identity = 25/45 (55.56%), Postives = 32/45 (71.11%), Query Frame = 0
Query:    1 VRDWLREGCDCVVIAGKYDPLAAVEAMLPHLTPSRPFAVYSEFVE 45
            +R W+RE  D +VIA  YDP   + AMLP+L  S+PF VYSEF+E
Sbjct:   61 IRQWMREKSDSLVIAANYDPEEVLLAMLPYLARSKPFVVYSEFLE 105          
BLAST of mRNA_M-pyrifera_M_contig114138.2941.1 vs. uniprot
Match: H3GKX8_PHYRM (tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GKX8_PHYRM)

HSP 1 Score: 56.2 bits (134), Expect = 5.690e-8
Identity = 25/45 (55.56%), Postives = 32/45 (71.11%), Query Frame = 0
Query:    1 VRDWLREGCDCVVIAGKYDPLAAVEAMLPHLTPSRPFAVYSEFVE 45
            +R W+RE  D +VIA  YDP   + AMLP+L  S+PF VYSEF+E
Sbjct:  299 IRQWMREKSDSLVIAANYDPEEVLLAMLPYLARSKPFVVYSEFLE 343          
BLAST of mRNA_M-pyrifera_M_contig114138.2941.1 vs. uniprot
Match: A0A0W8CRU5_PHYNI (tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8CRU5_PHYNI)

HSP 1 Score: 55.8 bits (133), Expect = 6.630e-8
Identity = 25/46 (54.35%), Postives = 33/46 (71.74%), Query Frame = 0
Query:    1 VRDWLREGCDCVVIAGKYDPLAAVEAMLPHLTPSRPFAVYSEFVEV 46
            +R+W RE  D +VIA  YDP   + A+LP+L  S+PF VYSEF+EV
Sbjct:  229 IREWAREKSDSLVIAANYDPEEVLMALLPYLGRSKPFVVYSEFLEV 274          
BLAST of mRNA_M-pyrifera_M_contig114138.2941.1 vs. uniprot
Match: A0A3R7JUM1_9STRA (tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7JUM1_9STRA)

HSP 1 Score: 55.5 bits (132), Expect = 1.060e-7
Identity = 25/45 (55.56%), Postives = 33/45 (73.33%), Query Frame = 0
Query:    1 VRDWLREGCDCVVIAGKYDPLAAVEAMLPHLTPSRPFAVYSEFVE 45
            +R+W+RE  D +VIA  YDP   V A+LP+L  S+PF VYSEF+E
Sbjct:  299 IREWVREKSDSLVIAANYDPEELVLALLPYLGRSKPFVVYSEFLE 343          
BLAST of mRNA_M-pyrifera_M_contig114138.2941.1 vs. uniprot
Match: W2PH38_PHYPN (tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 n=3 Tax=Phytophthora parasitica TaxID=4792 RepID=W2PH38_PHYPN)

HSP 1 Score: 54.3 bits (129), Expect = 2.720e-7
Identity = 24/45 (53.33%), Postives = 32/45 (71.11%), Query Frame = 0
Query:    1 VRDWLREGCDCVVIAGKYDPLAAVEAMLPHLTPSRPFAVYSEFVE 45
            +R+W RE  D +VIA  YDP   + A+LP+L  S+PF VYSEF+E
Sbjct:  281 IREWAREKSDSLVIAASYDPEEVLMALLPYLGRSKPFVVYSEFLE 325          
BLAST of mRNA_M-pyrifera_M_contig114138.2941.1 vs. uniprot
Match: A0A0W8CAK1_PHYNI (tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 n=14 Tax=Phytophthora TaxID=4783 RepID=A0A0W8CAK1_PHYNI)

HSP 1 Score: 54.3 bits (129), Expect = 2.720e-7
Identity = 24/45 (53.33%), Postives = 32/45 (71.11%), Query Frame = 0
Query:    1 VRDWLREGCDCVVIAGKYDPLAAVEAMLPHLTPSRPFAVYSEFVE 45
            +R+W RE  D +VIA  YDP   + A+LP+L  S+PF VYSEF+E
Sbjct:  339 IREWAREKSDSLVIAANYDPEEVLMALLPYLGRSKPFVVYSEFLE 383          
BLAST of mRNA_M-pyrifera_M_contig114138.2941.1 vs. uniprot
Match: A0A662WG54_9STRA (tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WG54_9STRA)

HSP 1 Score: 53.5 bits (127), Expect = 5.090e-7
Identity = 23/45 (51.11%), Postives = 32/45 (71.11%), Query Frame = 0
Query:    1 VRDWLREGCDCVVIAGKYDPLAAVEAMLPHLTPSRPFAVYSEFVE 45
            +R W+RE  D +VIA  YDP   + A+LP+L  S+PF +YSEF+E
Sbjct:  277 IRQWVRETSDSLVIAANYDPEQVLLALLPYLGRSKPFVIYSEFLE 321          
BLAST of mRNA_M-pyrifera_M_contig114138.2941.1 vs. uniprot
Match: G4YI76_PHYSP (tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 n=4 Tax=Phytophthora TaxID=4783 RepID=G4YI76_PHYSP)

HSP 1 Score: 53.5 bits (127), Expect = 5.090e-7
Identity = 24/45 (53.33%), Postives = 31/45 (68.89%), Query Frame = 0
Query:    1 VRDWLREGCDCVVIAGKYDPLAAVEAMLPHLTPSRPFAVYSEFVE 45
            +R W RE  D +VIA  YDP   + A+LP+L  S+PF VYSEF+E
Sbjct:  332 IRQWAREKSDSLVIAANYDPEEVLMALLPYLGRSKPFVVYSEFLE 376          
BLAST of mRNA_M-pyrifera_M_contig114138.2941.1 vs. uniprot
Match: A0A0P1AWZ4_PLAHL (tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AWZ4_PLAHL)

HSP 1 Score: 53.5 bits (127), Expect = 5.100e-7
Identity = 22/45 (48.89%), Postives = 33/45 (73.33%), Query Frame = 0
Query:    1 VRDWLREGCDCVVIAGKYDPLAAVEAMLPHLTPSRPFAVYSEFVE 45
            +R+W+R+  D +VIA  YDP   + A+LP+L  S+PF +YSEF+E
Sbjct:  336 IREWVRQKSDSLVIAANYDPEKVLMALLPYLGRSKPFVIYSEFLE 380          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig114138.2941.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
D8LS75_ECTSI1.030e-1982.61tRNA (adenine(58)-N(1))-methyltransferase non-cata... [more]
H3GKY1_PHYRM2.460e-855.56tRNA (adenine(58)-N(1))-methyltransferase non-cata... [more]
H3GKX8_PHYRM5.690e-855.56tRNA (adenine(58)-N(1))-methyltransferase non-cata... [more]
A0A0W8CRU5_PHYNI6.630e-854.35tRNA (adenine(58)-N(1))-methyltransferase non-cata... [more]
A0A3R7JUM1_9STRA1.060e-755.56tRNA (adenine(58)-N(1))-methyltransferase non-cata... [more]
W2PH38_PHYPN2.720e-753.33tRNA (adenine(58)-N(1))-methyltransferase non-cata... [more]
A0A0W8CAK1_PHYNI2.720e-753.33tRNA (adenine(58)-N(1))-methyltransferase non-cata... [more]
A0A662WG54_9STRA5.090e-751.11tRNA (adenine(58)-N(1))-methyltransferase non-cata... [more]
G4YI76_PHYSP5.090e-753.33tRNA (adenine(58)-N(1))-methyltransferase non-cata... [more]
A0A0P1AWZ4_PLAHL5.100e-748.89tRNA (adenine(58)-N(1))-methyltransferase non-cata... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig114138contigM-pyrifera_M_contig114138:304..441 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig114138.2941.1mRNA_M-pyrifera_M_contig114138.2941.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig114138 304..441 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig114138.2941.1 ID=prot_M-pyrifera_M_contig114138.2941.1|Name=mRNA_M-pyrifera_M_contig114138.2941.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=46bp
VRDWLREGCDCVVIAGKYDPLAAVEAMLPHLTPSRPFAVYSEFVEV
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