prot_M-pyrifera_M_contig114113.2939.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig114113.2939.1
Unique Nameprot_M-pyrifera_M_contig114113.2939.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length49
Homology
BLAST of mRNA_M-pyrifera_M_contig114113.2939.1 vs. uniprot
Match: D7G0C8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0C8_ECTSI)

HSP 1 Score: 65.5 bits (158), Expect = 3.590e-11
Identity = 35/48 (72.92%), Postives = 40/48 (83.33%), Query Frame = 0
Query:    1 MYRGMFWEFSELYHRQEVVGALLTHAGSGSETETDCALTALSALAASS 48
            MYR +F  FSE YHRQEVVGAL+TH G+GSE ETD AL+ALSALA+ S
Sbjct:  377 MYREIFSGFSEAYHRQEVVGALITHCGAGSELETDSALSALSALASPS 424          
BLAST of mRNA_M-pyrifera_M_contig114113.2939.1 vs. uniprot
Match: A0A835UL84_VANPL (Uncharacterized protein n=1 Tax=Vanilla planifolia TaxID=51239 RepID=A0A835UL84_VANPL)

HSP 1 Score: 47.4 bits (111), Expect = 8.810e-5
Identity = 23/45 (51.11%), Postives = 32/45 (71.11%), Query Frame = 0
Query:    1 MYRGMFWEFSELYHRQEVVGALLTHAGSGSETETDCALTALSALA 45
            +Y+ +F E  ++Y RQEV+GALLTH GSG + E + AL  L+ LA
Sbjct:  459 LYKSLFEELKDIYSRQEVLGALLTHIGSGHDQEVNSALETLNLLA 503          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig114113.2939.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G0C8_ECTSI3.590e-1172.92Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835UL84_VANPL8.810e-551.11Uncharacterized protein n=1 Tax=Vanilla planifolia... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029448Fanconi anaemia protein FANCD2PFAMPF14631FancD2coord: 1..46
e-value: 2.7E-8
score: 31.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig114113contigM-pyrifera_M_contig114113:296..442 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig114113.2939.1mRNA_M-pyrifera_M_contig114113.2939.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig114113 272..442 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig114113.2939.1 ID=prot_M-pyrifera_M_contig114113.2939.1|Name=mRNA_M-pyrifera_M_contig114113.2939.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=49bp
MYRGMFWEFSELYHRQEVVGALLTHAGSGSETETDCALTALSALAASSS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029448FANCD2