prot_M-pyrifera_M_contig114028.2919.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig114028.2919.1
Unique Nameprot_M-pyrifera_M_contig114028.2919.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length161
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig114028.2919.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 99..123
e-value: 39.0
score: 8.4
coord: 75..98
e-value: 71.0
score: 6.3
coord: 3..26
e-value: 78.0
score: 5.9
coord: 27..51
e-value: 64.0
score: 6.7
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 5..64
e-value: 3.9E-7
score: 29.7
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 1..161
e-value: 7.9E-50
score: 171.6
NoneNo IPR availablePANTHERPTHR45974:SF42coord: 5..75
NoneNo IPR availablePANTHERPTHR45974FAMILY NOT NAMEDcoord: 45..138
NoneNo IPR availablePANTHERPTHR45974:SF42coord: 45..138
coord: 68..161
NoneNo IPR availablePANTHERPTHR45974FAMILY NOT NAMEDcoord: 5..75
NoneNo IPR availablePANTHERPTHR45974FAMILY NOT NAMEDcoord: 68..161
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 3..160

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig114028contigM-pyrifera_M_contig114028:91..573 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig114028.2919.1mRNA_M-pyrifera_M_contig114028.2919.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig114028 91..573 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig114028.2919.1 ID=prot_M-pyrifera_M_contig114028.2919.1|Name=mRNA_M-pyrifera_M_contig114028.2919.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=161bp
GSLIKLTSLRLSQNNFTGTIPTEFGNLVNLTSLQLTENNLNGNIPSELGD
LKLISTLSLNKNGLSGNIPISLGNLTQLKYLRLSENNLDGEIPKELGNLT
ELLWLFLHKNQLSGSLPSELGELSNLIYLFAFSNNLSGEIPSSYANMTKL
ENLSLSENNIS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003591Leu-rich_rpt_typical-subtyp
IPR001611Leu-rich_rpt
IPR032675LRR_dom_sf