prot_M-pyrifera_M_contig114.2904.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig114.2904.1
Unique Nameprot_M-pyrifera_M_contig114.2904.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length1029
Homology
BLAST of mRNA_M-pyrifera_M_contig114.2904.1 vs. uniprot
Match: A0A6H5KMQ0_9PHAE (PH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMQ0_9PHAE)

HSP 1 Score: 275 bits (703), Expect = 2.370e-73
Identity = 199/386 (51.55%), Postives = 233/386 (60.36%), Query Frame = 0
Query:    3 SGSWRGRHALLVPHTFLYYFGENTAATDLRPHGVIDLELYTDIQVVDGNVVRLAPEDENSPIRTFYLRLPSKQEAEDWADTIRSTRFACVREERDALRSAKTALTEKIAILAATLRESRDSLEASNRRETAAVSELARSNAKEARCAALVRALAASA-------CDAGG--EGQRSEARAEARAGQR----------WGSDRH------------LVEHINAEPGRVTLG-----------AAVCALSELAALEEAISERAREVAALKRANETLRESASAAAXXXXXXXXXXXXXXXXXXXRGAGEAAAREEAEAELHVLRAELESSRAXXXXXXXXLLAVAAACREAEAKARELQEHRRVLAREVKASRAEQRRLSASLACATRA 346
            SGSWR R ALLVPHTFLYYF E+TA TDLRPHGVIDLELYTDIQVVDGN+++LAP DE SPIRTFYLRL    EAE+WA  IR TRF  VR+ERDALRSAK +L++++      + ES   L AS  RE+AAVSEL+R +A+E R    VRAL A++       CD G   +   ++    AR+G+            GSD              L E   +E   V  G            A  +LS LAALEE I+ERA+EVA+LK ANE LRE  + A                    R  GEA+ R + EAEL  LR EL   RA        L  VAAACREAEAK+RELQEHRRVLAREVKASRAEQRRLSA+L+ AT A
Sbjct:   68 SGSWRKRRALLVPHTFLYYFSEHTAETDLRPHGVIDLELYTDIQVVDGNLLKLAPGDETSPIRTFYLRLKDGDEAEEWAQAIRDTRFRLVRDERDALRSAKMSLSDQLVTHEEAIHESLALLRASRGRESAAVSELSRRDAEEERRVEQVRALLAASTSSPPAHCDGGDMTDNILADPPGWARSGRERPRSCSSSCTGGSDSESSRVRGCTSSSSLPERARSEASAVARGMGTGVGGRGSSVAATSLSGLAALEEVIAERAQEVASLKMANEALREKEALADDRRRRDVAEALRLRDQERERAEGEASLRSDLEAELQRLREELADCRAGREEARVNLGVVAAACREAEAKSRELQEHRRVLAREVKASRAEQRRLSAALSFATTA 453          
BLAST of mRNA_M-pyrifera_M_contig114.2904.1 vs. uniprot
Match: D8LCD8_ECTSI (N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCD8_ECTSI)

HSP 1 Score: 234 bits (598), Expect = 7.200e-60
Identity = 185/383 (48.30%), Postives = 214/383 (55.87%), Query Frame = 0
Query:    3 SGSWRGRHALLVPHTFLYYFGENTAATDLRPHGVIDLELYTDIQVVDGNVVRLAPEDENSPIRTFYLRLPSKQEAEDWADTIRSTRFACVREERDALRSAKTALTEKIAILAATLRESRDSLEASNRRETAAVSELARSNAKEARCAALVRALAASA-------CDAG------------GEGQRSEARAEARAGQRWGSDRH------------LVEHINAEPGRVTLG-----------AAVCALSELAALEEAISERAREVAALKRANETLRESASAAAXXXXXXXXXXXXXXXXXXXRGAGEAAAREEAEAELHVLRAELESSRAXXXXXXXXLLAVAAACREAEAKARELQEHRRVLAREVKASRAEQRRLSASLACA 343
            SGSWR R ALLVPHTFLYYFGE+TA TDLRPHGVIDLELYTDIQVVDGN+++LAP DE SPIRTFYLRL    EAE+WA  IR TRF  VR+ERDALR AK  L++++      + ES   L AS  RE+AAVSEL+R +A+EAR    VRAL A++       CD G                R   R+ + +    G D              L E   AE   V  G            A  +LSELAALEE I+ERA+EVA+LK  NE LRE  + A                    R  GEA+ R + EAEL            XXXXXXXX                 LQEHRRVLAREVKASR EQRRLSA+L+CA
Sbjct:   68 SGSWRRRRALLVPHTFLYYFGEHTAETDLRPHGVIDLELYTDIQVVDGNLLKLAPGDETSPIRTFYLRLKDGDEAEEWAQAIRETRFGLVRDERDALRCAKMGLSDQLVTHEEAIHESLALLRASRGRESAAVSELSRRDAEEARRVGQVRALLAASTSSPPASCDGGDIADNLADPPGWARSGRERPRSSSSSSCTDGGDSESSCLRGCVSWSSLQERARAEASAVVGGMGTGVGGRGSSVAATSLSELAALEEVIAERAQEVASLKVDNEALREKEALADDRRRRDVAEALRLRDQERERAEGEASLRSDLEAELQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQEHRRVLAREVKASRVEQRRLSAALSCA 450          
BLAST of mRNA_M-pyrifera_M_contig114.2904.1 vs. uniprot
Match: A0A7S3K628_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K628_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 4.630e-10
Identity = 46/137 (33.58%), Postives = 74/137 (54.01%), Query Frame = 0
Query:    3 SGSWRGRHALLVPHTFLYYFGENTAATDLRPHGVIDLELYTDIQVVDGNVVRLA-PEDENSPIRTFYLRLPSKQEAEDWADTIRSTRFACVREERDALRSAK-------TALTEKIAILAATLRESRDSLEASNRRE 131
            S  W+ R+  LVP T LYYF   ++       G+IDLE YTD+++V  N +RL+ P D   P+R+F+ R  + ++   WA  +   R+  V EERDA +  +       +A  EK+  L   +   R+++EA+  R+
Sbjct:   51 SNQWQRRYCALVPQTLLYYFDSESSEF---ARGIIDLEYYTDVEIVAKNTIRLSTPPD--IPLRSFFFRADNDEQCAAWAAALTRERYFVVAEERDAYQKLQMEFQKESSATAEKVEKLREAMSAKRNAIEAAEARQ 182          
BLAST of mRNA_M-pyrifera_M_contig114.2904.1 vs. uniprot
Match: A0A835YRZ5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRZ5_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 4.370e-8
Identity = 43/110 (39.09%), Postives = 56/110 (50.91%), Query Frame = 0
Query:    6 WRGRHALLVPHTFLYYFGENTAATDLRPHGVIDLELYTDIQVVDGNVVRLAPEDENSPI---------------RTFYLRLPSKQEAEDWADTIR--STRFACVREERDA 98
            W GR  ++VPH FLYYFGE+  A    PHG+IDLE YT  +V++GNV+R+  +  +S                 R  YL L S  EA  WA  +   + R   V   RDA
Sbjct:   77 WHGRVCMVVPHAFLYYFGEDDLAA---PHGIIDLEAYTRSEVLEGNVLRVYADAADSAAAAADPXXXAEPALRPRDIYLCLASDAEARAWAAALAPDALRLRAVAAARDA 183          
BLAST of mRNA_M-pyrifera_M_contig114.2904.1 vs. uniprot
Match: F0YMI3_AURAN (PH domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YMI3_AURAN)

HSP 1 Score: 66.2 bits (160), Expect = 1.860e-7
Identity = 36/95 (37.89%), Postives = 57/95 (60.00%), Query Frame = 0
Query:    6 WRGRHALLVPHTFLYYF-GENTAATDLRPHGVIDLELYTDIQVVDGNVVRLA-PEDENSPIRTFYLRLPSKQEAEDWADTIRSTRFACVREERDA 98
            W+ R+  LVP T LYY+ GE++ +      G+IDLE YT+++VV  N +RL+ P D   P+R+F+ +   + +   WA  +   R+  V +ERDA
Sbjct:   50 WQRRYCALVPQTLLYYYDGEHSESA----RGIIDLEYYTEVEVVARNTIRLSTPPD--IPLRSFFFKADDEDQCAAWAAALTRERYFVVADERDA 138          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig114.2904.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5KMQ0_9PHAE2.370e-7351.55PH domain-containing protein n=1 Tax=Ectocarpus sp... [more]
D8LCD8_ECTSI7.200e-6048.30N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepI... [more]
A0A7S3K628_9STRA4.630e-1033.58Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A835YRZ5_9STRA4.370e-839.09Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
F0YMI3_AURAN1.860e-737.89PH domain-containing protein n=1 Tax=Aureococcus a... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 270..332
NoneNo IPR availableCOILSCoilCoilcoord: 210..244
NoneNo IPR availableSUPERFAMILY50729PH domain-likecoord: 3..88
IPR011993PH-like domain superfamilyGENE3D2.30.29.30coord: 2..93
e-value: 1.6E-6
score: 29.8
IPR001849Pleckstrin homology domainPROSITEPS50003PH_DOMAINcoord: 1..89
score: 10.691

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig114contigM-pyrifera_M_contig114:43691..49718 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig114.2904.1mRNA_M-pyrifera_M_contig114.2904.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig114 43691..49718 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig114.2904.1 ID=prot_M-pyrifera_M_contig114.2904.1|Name=mRNA_M-pyrifera_M_contig114.2904.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=1029bp
MYSGSWRGRHALLVPHTFLYYFGENTAATDLRPHGVIDLELYTDIQVVDG
NVVRLAPEDENSPIRTFYLRLPSKQEAEDWADTIRSTRFACVREERDALR
SAKTALTEKIAILAATLRESRDSLEASNRRETAAVSELARSNAKEARCAA
LVRALAASACDAGGEGQRSEARAEARAGQRWGSDRHLVEHINAEPGRVTL
GAAVCALSELAALEEAISERAREVAALKRANETLRESASAAAEDRRQHEA
AALALRRKEDERGAGEAAAREEAEAELHVLRAELESSRASKEEARANLLA
VAAACREAEAKARELQEHRRVLAREVKASRAEQRRLSASLACATRAATAA
AATAAAATAAKAATAANAKAHAAAGDCYRLPSSVGSVAGDEARKVEVGRG
GGGEGRGEGAARRAVGGGKGASESKTNDVGDEAGGERHHGEGKGDCLGSS
SPGGEGGTEAVQKNETEREEVLGPTPTHSGVKPGEIEASSSSSTVNGTSG
PVSAGADEEGGFLSPPSPQPLPPPADLRASTRGSERGVGGENGATSPEAG
SPGLRKGGSDSDSCGSGGDCSRSGRRRDSELDPSPSPSSDTAATSPAGLV
ASGSSGEETPAWSNVGVGDNGGDVNEEGGHGREMTGRADEIVAEGGTLSV
DRRSLCIGANVGASVGTGAQERLKSADPAPPAASPSEASLVGESSRFVNQ
MVQTFSAGLRESRRARRTPLLGSLDDGSDAGDAVEEEEEEGEDNGDVTDG
VDGDSRHFTAPGEEAGKEGDEGDEEDEDEERKCGAWSAWSTAVVPPGGTG
GGRGFGGEGGGVEGEGSLSGSSSDGLQRSPSTDTSDGAGSVARTGATDDH
NPTAAAILVRPQPTATTTDSELGAGCSLARASPVAAPAAAAAIGRRGSLE
AAAEDDTAAAGAATPLGSPADWLRKVGQPDQGWPPLNEESGCSPTRYPLP
ENGNSRRGSGDGNAAAAAAVAAAAAAATAAAAAAAERGGRVSSEAAAAAR
RWESKLKGSLMSMTEGVRWGMGPQRLNAV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011993PH-like_dom_sf
IPR001849PH_domain