prot_M-pyrifera_M_contig113836.2867.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig113836.2867.1
Unique Nameprot_M-pyrifera_M_contig113836.2867.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length179
Homology
BLAST of mRNA_M-pyrifera_M_contig113836.2867.1 vs. uniprot
Match: A0A2P6NLZ4_9EUKA (Activating signal cointegrator 1 complex subunit 2-like n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NLZ4_9EUKA)

HSP 1 Score: 60.1 bits (144), Expect = 2.370e-7
Identity = 49/170 (28.82%), Postives = 86/170 (50.59%), Query Frame = 0
Query:    4 ETVKDLDRRWIGDLSFFEYLPS-------DNSSLQSLETLKYLNNDLRELLLAPYHVFWSYVLLDKSFSLFLDSFLRYFDEPSLPLPDLQRAELGSLDAAGLKGALFQRVFLVVCRMSQMEEAPHLFISSSFYTQEVAKNHLLDLPKLIDFTRLYGCHNRQKVAPTLKFL 166
            +TV DL ++ I  L F  Y+ +       D S++  L  ++ +N DL  LL   Y  FW  ++ D+SF +FLD+FLRY      P     + E    D    +  L +R + ++ R+ Q +E     ++  ++ + V  +HLL++P LID   LYG  + + ++  ++ L
Sbjct:  103 QTVLDLSKK-IPSLDFLPYVITAQTNEAFDTSTISEL--IQNINLDLSSLLKTDYVTFWHQIISDRSFHMFLDTFLRY-----CPRVWSTKGEAFLNDYEHKQ--LTKRAYALIVRILQHQEDVDHHMNKEYHAKLV-HDHLLNVPSLIDICSLYGSVDTESLSTMMEDL 261          
BLAST of mRNA_M-pyrifera_M_contig113836.2867.1 vs. uniprot
Match: A0A7S3WKY5_EMIHU (Hypothetical protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3WKY5_EMIHU)

HSP 1 Score: 54.7 bits (130), Expect = 1.130e-5
Identity = 50/160 (31.25%), Postives = 71/160 (44.38%), Query Frame = 0
Query:    3 IETVKDLDRRWIGD-LSFFEYLPSDNSSLQSLE--TLKYLNNDLRELLLAPYHVFWSYVLLDKSFSLFLDSFLRYFDEP---SLPLPDLQRAELGSLDAAGLKGALFQRVFLVVCRMSQME-EAPHLFISSSFYTQEVAKNHLLDLPKLIDFTRLYGCHN 155
            +  V  +D  W    L    YLP D      LE   L+     L +LL AP HVFWS +L D+S S FLD  LR+       S P  D         D +  +G L   +  V+ R++  E +     +  + ++  V    LLD PKL+D + L+G  N
Sbjct:   28 VRRVNAIDEHWASPPLDLPPYLPPDADEAAPLEPEALEASVRALEQLLRAPMHVFWSRLLHDRSLSDFLDGVLRFSPRGFGRSAPRAD-------EADGSPGEGQLRACLLRVLLRLASPEKDGGAAALPPADWSSLVYDRWLLDAPKLLDASALFGFSN 180          
BLAST of mRNA_M-pyrifera_M_contig113836.2867.1 vs. uniprot
Match: R1DKB7_EMIHU (SAM domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DKB7_EMIHU)

HSP 1 Score: 55.1 bits (131), Expect = 1.190e-5
Identity = 53/166 (31.93%), Postives = 72/166 (43.37%), Query Frame = 0
Query:    3 IETVKDLDRRWIGD-LSFFEYLPSDNSSLQSLE--TLKYLNNDLRELLLAPYHVFWSYVLLDKSFSLFLDSFLRYFDEP---SLPLPDLQRAELGSLDAAGLKGALFQRVFLVVCRMSQMEE-------APHLFISSSFYTQEVAKNHLLDLPKLIDFTRLYGCHN 155
            +  V  +D  W    L    YLP D      LE   L+     L +LL AP HVFWS +L D+S S FLD  LR+       S P  D         D +  +G L   +  V+ R++  E+        P  + S S  +  V    LLD PKL+D + L+G  N
Sbjct:   20 VRRVNAIDEHWTSPPLDLPPYLPPDADEAAPLEPEALEASVRALEQLLRAPMHVFWSRLLHDRSLSEFLDGVLRFSPRGFGRSAPRAD-------EADGSPGEGQLRACLLRVLLRLASPEKDGGAAALPPADWRSHSRESSLVYDRWLLDAPKLLDASALFGFSN 178          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig113836.2867.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2P6NLZ4_9EUKA2.370e-728.82Activating signal cointegrator 1 complex subunit 2... [more]
A0A7S3WKY5_EMIHU1.130e-531.25Hypothetical protein n=2 Tax=Emiliania huxleyi Tax... [more]
R1DKB7_EMIHU1.190e-531.93SAM domain-containing protein n=1 Tax=Emiliania hu... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR21494ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 2 ASC-1 COMPLEX SUBUNIT P100coord: 19..168
NoneNo IPR availablePANTHERPTHR21494:SF0ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 2coord: 19..168

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig113836contigM-pyrifera_M_contig113836:14..550 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig113836.2867.1mRNA_M-pyrifera_M_contig113836.2867.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig113836 14..550 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig113836.2867.1 ID=prot_M-pyrifera_M_contig113836.2867.1|Name=mRNA_M-pyrifera_M_contig113836.2867.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=179bp
GEIETVKDLDRRWIGDLSFFEYLPSDNSSLQSLETLKYLNNDLRELLLAP
YHVFWSYVLLDKSFSLFLDSFLRYFDEPSLPLPDLQRAELGSLDAAGLKG
ALFQRVFLVVCRMSQMEEAPHLFISSSFYTQEVAKNHLLDLPKLIDFTRL
YGCHNRQKVAPTLKFLFYQLPRLKKSPEE
back to top