prot_M-pyrifera_M_contig113679.2845.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig113679.2845.1
Unique Nameprot_M-pyrifera_M_contig113679.2845.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length143
Homology
BLAST of mRNA_M-pyrifera_M_contig113679.2845.1 vs. uniprot
Match: A0A165TLE1_9APHY (RNB-domain-containing protein n=1 Tax=Daedalea quercina L-15889 TaxID=1314783 RepID=A0A165TLE1_9APHY)

HSP 1 Score: 70.1 bits (170), Expect = 3.060e-11
Identity = 46/140 (32.86%), Postives = 69/140 (49.29%), Query Frame = 0
Query:    1 PAYAIDPVDAESLDDAVSLGDKGVVPPTSKKGTPGAP-CQWVHIHVTDISRYIAPDTPIDRVARRLGENAVLKEASMSIFPLATVRSLLSFTEERASPSLSFAALVEDSTGAVVDYKAYPSLVGNIRRMTYREANSALTS 139
            PAY ID VDAE LDDA+S+           +  P  P C W+H+H+ D +  + P   I R A    +     + S+ + P       LS  E RA   L+F+  + D  G +VDYK  P ++ N R++ Y + + A+ S
Sbjct:  493 PAYIIDDVDAEELDDAISV-----------ERIPTEPDCAWLHVHIADPTSVLPPTHRIAREAFSRMQTRYYLDTSVPMLPDVPQLRHLSLGEGRAQLVLTFSGKI-DLEGNIVDYKIRPGIIRNARKLHYHDVSKAIGS 620          
BLAST of mRNA_M-pyrifera_M_contig113679.2845.1 vs. uniprot
Match: M5GG72_DACPD (RNB-domain-containing protein n=1 Tax=Dacryopinax primogenitus (strain DJM 731) TaxID=1858805 RepID=M5GG72_DACPD)

HSP 1 Score: 64.7 bits (156), Expect = 2.320e-9
Identity = 42/145 (28.97%), Postives = 72/145 (49.66%), Query Frame = 0
Query:    1 PAYAIDPVDAESLDDAVSLGDKGVVPPTSKKGTPGAPCQWVHIHVTDISRYIAPDTPIDRVARRLGENAVLKEASMSIFPLATVRSLLSFTEERASP--SLSFAALVEDSTGAVVDYKAYPSLVGNIRRMTYREANSALTSAKHP 143
            P + ID VDA+ LDD +S+           +  PG+   W+H+HV D +R + PD    R AR   E   L E ++ + P +   ++   T E  +P  +L+F+A V +  G + D +    ++ N+ R+TY + ++ L     P
Sbjct:  503 PVFVIDQVDAQELDDGLSV-----------EVIPGSTDVWLHVHVADPTRLLHPDNVFSREARNRAETIYLVEQTIPMLPRSL--AMAGMTLEPGNPLCTLTFSARVSED-GDMTDLRVQAGVIRNVVRITYNQVDALLGYTPKP 633          
BLAST of mRNA_M-pyrifera_M_contig113679.2845.1 vs. uniprot
Match: A0A3R7U074_9SYNE (RNB domain-containing ribonuclease n=2 Tax=unclassified Synechococcus TaxID=2626047 RepID=A0A3R7U074_9SYNE)

HSP 1 Score: 62.4 bits (150), Expect = 1.420e-8
Identity = 38/138 (27.54%), Postives = 63/138 (45.65%), Query Frame = 0
Query:    3 YAIDPVDAESLDDAVSLGDKGVVPPTSKKGTPGAPCQWVHIHVTDISRYIAPDTPIDRVARRLGENAVLKEASMSIFPLATVRSLLSFTEERASPSLSFAALVEDSTGAVVDYKAYPSLVGNIRRMTYREANSALTSA 140
            Y +D +    +DD +SL              P     W+ IH+ D +R IAPD+P+DR ARR   +  L +    + P+     +LS    +  P+LS   L+E   G++  ++   S V    R+ Y +A+  +  A
Sbjct:  290 YTVDDITTREIDDGLSL-------------EPKPDGDWIWIHIADPARLIAPDSPLDREARRRATSLYLADGCQPMLPMQLAADVLSLRSGQRCPALSVGVLLEPE-GSIAQHRITRSWVQPRYRLNYEDADELIELA 413          
BLAST of mRNA_M-pyrifera_M_contig113679.2845.1 vs. uniprot
Match: A0A8K0JN85_9TREE (Uncharacterized protein n=1 Tax=Filobasidium floriforme TaxID=5210 RepID=A0A8K0JN85_9TREE)

HSP 1 Score: 62.0 bits (149), Expect = 2.010e-8
Identity = 41/142 (28.87%), Postives = 70/142 (49.30%), Query Frame = 0
Query:    1 PAYAIDPVDAESLDDAVSLGDKGVVPPTSKKGTPGAPCQWVHIHVTDISRYIAPDTPIDRVARRLGENAVLK-EASMSIFPLATVRSLLSFTEERASPS----LSFAALVEDSTGAVVDYKAYPSLVGNIRRMTYREANSAL 137
            P Y ID  DA+ LDD +SL           +  PG+  +W+H+H+ D +R++AP+  I   A R G       + +  + P   V S +S   +R   +    L+F+A V  + G ++DY+    +V N++ +TY   +  L
Sbjct:  512 PVYVIDSADAKELDDGISL-----------ERIPGSSDRWIHVHIADPTRWLAPEDDITSRAMRHGSTFYAAGDGARPMMPNELVMSAMSLGAKRDQRAPQVVLTFSAKVTGN-GELLDYQIRAGMVQNVKTITYSSVDDVL 641          
BLAST of mRNA_M-pyrifera_M_contig113679.2845.1 vs. uniprot
Match: A0A507CYN1_9FUNG (RNB domain-containing protein n=2 Tax=Synchytrium endobioticum TaxID=286115 RepID=A0A507CYN1_9FUNG)

HSP 1 Score: 61.2 bits (147), Expect = 3.730e-8
Identity = 38/140 (27.14%), Postives = 73/140 (52.14%), Query Frame = 0
Query:    1 PAYAIDPVDAESLDDAVSLGDKGVVPPTSKKGTPGAPCQWVHIHVTDISRYIAPDTPIDRVARRLGENAVLKEASMSIFPLATVR---SLLSFTEERASPSLSFAALVEDSTGAVVDYKAYPSLVGNIRRMTYREANSAL 137
            P + ID   A  LDD +S   +     TS          W+H+H+ D + YI+P++ +  +A+  G +  L E + ++FP +       L    + +A+P+++F+A +  + G +VD+   PSL+ N++ M+Y + +  L
Sbjct:  434 PVFVIDDPLAHELDDGISF--ERCDDDTS----------WIHVHIADPTAYISPNSALALIAQARGASVYLPEKTYTMFPHSVSERGWDLRGRGDGKATPAMTFSAKLNQN-GEIVDFDVKPSLIRNVKIMSYDDVDKVL 560          
BLAST of mRNA_M-pyrifera_M_contig113679.2845.1 vs. uniprot
Match: A0A2E6TI76_9BACT (Ribonuclease R n=1 Tax=Opitutae bacterium TaxID=2026771 RepID=A0A2E6TI76_9BACT)

HSP 1 Score: 60.8 bits (146), Expect = 4.870e-8
Identity = 41/132 (31.06%), Postives = 67/132 (50.76%), Query Frame = 0
Query:    5 IDPVDAESLDDAVSLGDKGVVPPTSKKGTPGAPCQWVHIHVTDISRYIAPDTPIDRVARRLGENAVLKEASMSIFPLATVRSLLSFTE--ERASPSLSFAALVEDSTGAVVDYKAYPSLVGNIRRMTYREAN 134
            +DPVDA   DDA+S         + K G        V +H+ D+S Y APDTP+D+ ARR G +  L    + + P      + S  E  +R + S+ F     DS G +V ++   +++ + +R+TY +A+
Sbjct:  200 VDPVDARDFDDALSFH-------SLKDGK-----VEVGVHIADVSAYFAPDTPLDKEARRRGNSTYLVGEVVPMLPTKLSNGICSLVEAEDRLAKSVLFTF---DSKGKLVGHRLAETVIHSDKRLTYEQAS 316          
BLAST of mRNA_M-pyrifera_M_contig113679.2845.1 vs. uniprot
Match: L8N221_9CYAN (Exoribonuclease II n=5 Tax=Pseudanabaena TaxID=1152 RepID=L8N221_9CYAN)

HSP 1 Score: 60.5 bits (145), Expect = 6.670e-8
Identity = 41/138 (29.71%), Postives = 65/138 (47.10%), Query Frame = 0
Query:    3 YAIDPVDAESLDDAVS---LGDKGVVPPTSKKGTPGAPCQWVHIHVTDISRYIAPDTPIDRVARRLGENAVLKEASMSIFPLATVRSLLSFTEERASPSLSFAALVEDSTGAVVDYKAYPSLVGNIRRMTYREANSAL 137
            Y ID +    +DD +S   L D G               + + IH+ D +R++ PD+P+D+ AR+ G +  L    + +FP+      +S  E +   +LSFA  + D  GAV  Y+   SLV    R+TY +    L
Sbjct:  279 YTIDDISTTEIDDGLSIETLSDGG---------------KRIWIHIADPTRWLDPDSPLDKDARKRGTSVYLPTGVIPMFPIELAAGPMSLIENKVCHALSFAVDL-DRVGAVSHYEIVASLVKPNYRLTYEDVEEML 400          
BLAST of mRNA_M-pyrifera_M_contig113679.2845.1 vs. uniprot
Match: UPI001680A562 (ribonuclease R n=1 Tax=Pseudanabaena sp. FACHB-1998 TaxID=2692858 RepID=UPI001680A562)

HSP 1 Score: 60.1 bits (144), Expect = 9.080e-8
Identity = 38/135 (28.15%), Postives = 68/135 (50.37%), Query Frame = 0
Query:    3 YAIDPVDAESLDDAVSLGDKGVVPPTSKKGTPGAPCQWVHIHVTDISRYIAPDTPIDRVARRLGENAVLKEASMSIFPLATVRSLLSFTEERASPSLSFAALVEDSTGAVVDYKAYPSLVGNIRRMTYREANSAL 137
            Y ID +    +DD +S+        T   G+     + + IH+ D +R++ P++P+D+ AR+ G +  L    + +FP+      +S  + +   +LSFA  +++  GAV  Y+  PSLV    R+TY +    L
Sbjct:  279 YTIDDISTTEIDDGLSIE-------TLADGS-----KRIWIHIADPTRWLDPESPLDKDARKRGTSVYLPTGVIPMFPIELAAGPMSLIQSKVCYALSFAVDLDEG-GAVTYYEIVPSLVKPNYRLTYEDVEEML 400          
BLAST of mRNA_M-pyrifera_M_contig113679.2845.1 vs. uniprot
Match: S8F2V0_FOMPI (RNB domain-containing protein n=1 Tax=Fomitopsis pinicola (strain FP-58527) TaxID=743788 RepID=S8F2V0_FOMPI)

HSP 1 Score: 60.1 bits (144), Expect = 9.420e-8
Identity = 40/144 (27.78%), Postives = 65/144 (45.14%), Query Frame = 0
Query:    1 PAYAIDPVDAESLDDAVSLGDKGVVPPTSKKGTPGAPCQ-WVHIHVTDISRYIAPDTPIDRVARRLGENAVLKEASMSIFPLATVRSLLSFTEERASPSLSFAALVEDSTGAVVDYKAYPSLVGNIRRMTYREANSALTSAKHP 143
            PAY ID +DAE LDDA+S+           +  P  P   W+H+H+ D +  + P   I R A    E     + S  + P       LS  ++     ++F+  V D  G +++YK  P ++ + R++ Y   N A+     P
Sbjct:  491 PAYVIDDIDAEELDDAISI-----------ESVPNEPDHAWLHVHIADPTSVLPPTHEIARQAFSRLETHYYLDRSYPLLPNVPQLRELSLGKDGPQVVMTFSGKV-DLEGNIIEYKIRPGIIRSARKLHYDSVNEAIGEPTAP 622          
BLAST of mRNA_M-pyrifera_M_contig113679.2845.1 vs. uniprot
Match: A0A7Y5MBZ9_9CYAN (VacB/RNase II family 3'-5' exoribonuclease n=1 Tax=Pseudanabaena biceps TaxID=927669 RepID=A0A7Y5MBZ9_9CYAN)

HSP 1 Score: 58.5 bits (140), Expect = 3.120e-7
Identity = 41/135 (30.37%), Postives = 64/135 (47.41%), Query Frame = 0
Query:    3 YAIDPVDAESLDDAVSLGDKGVVPPTSKKGTPGAPCQWVHIHVTDISRYIAPDTPIDRVARRLGENAVLKEASMSIFPLATVRSLLSFTEERASPSLSFAALVEDSTGAVVDYKAYPSLVGNIRRMTYREANSAL 137
            Y ID +    +DD +S+          +    G    WVHI   D +R++ PD+ +D+ AR+ G +  L    + +FP+      +S  E +   +LSFA  + D  GAV DY+   SLV    R+TY +    L
Sbjct:  279 YTIDDISTTEIDDGLSI----------ETLADGRKRIWVHI--ADPTRWLDPDSALDKDARKRGTSIYLPTGVIPMFPMDLATGPMSLIESKVCYALSFAVDL-DEVGAVSDYEIVASLVKPNYRLTYEDVEEML 400          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig113679.2845.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A165TLE1_9APHY3.060e-1132.86RNB-domain-containing protein n=1 Tax=Daedalea que... [more]
M5GG72_DACPD2.320e-928.97RNB-domain-containing protein n=1 Tax=Dacryopinax ... [more]
A0A3R7U074_9SYNE1.420e-827.54RNB domain-containing ribonuclease n=2 Tax=unclass... [more]
A0A8K0JN85_9TREE2.010e-828.87Uncharacterized protein n=1 Tax=Filobasidium flori... [more]
A0A507CYN1_9FUNG3.730e-827.14RNB domain-containing protein n=2 Tax=Synchytrium ... [more]
A0A2E6TI76_9BACT4.870e-831.06Ribonuclease R n=1 Tax=Opitutae bacterium TaxID=20... [more]
L8N221_9CYAN6.670e-829.71Exoribonuclease II n=5 Tax=Pseudanabaena TaxID=115... [more]
UPI001680A5629.080e-828.15ribonuclease R n=1 Tax=Pseudanabaena sp. FACHB-199... [more]
S8F2V0_FOMPI9.420e-827.78RNB domain-containing protein n=1 Tax=Fomitopsis p... [more]
A0A7Y5MBZ9_9CYAN3.120e-730.37VacB/RNase II family 3'-5' exoribonuclease n=1 Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001900Ribonuclease II/RPFAMPF00773RNBcoord: 2..140
e-value: 1.6E-21
score: 77.0
NoneNo IPR availablePANTHERPTHR23355RIBONUCLEASEcoord: 1..140
NoneNo IPR availablePANTHERPTHR23355:SF42EXORIBONUCLEASE II, MITOCHONDRIALcoord: 1..140
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 1..139

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig113679contigM-pyrifera_M_contig113679:2..430 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig113679.2845.1mRNA_M-pyrifera_M_contig113679.2845.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig113679 2..430 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig113679.2845.1 ID=prot_M-pyrifera_M_contig113679.2845.1|Name=mRNA_M-pyrifera_M_contig113679.2845.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=143bp
PAYAIDPVDAESLDDAVSLGDKGVVPPTSKKGTPGAPCQWVHIHVTDISR
YIAPDTPIDRVARRLGENAVLKEASMSIFPLATVRSLLSFTEERASPSLS
FAALVEDSTGAVVDYKAYPSLVGNIRRMTYREANSALTSAKHP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001900RNase_II/R
IPR012340NA-bd_OB-fold