prot_M-pyrifera_M_contig113586.2839.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig113586.2839.1
Unique Nameprot_M-pyrifera_M_contig113586.2839.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length73
Homology
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BLAST of mRNA_M-pyrifera_M_contig113586.2839.1 vs. uniprot
Match: A0A6H5JEJ0_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEJ0_9PHAE)

HSP 1 Score: 97.8 bits (242), Expect = 4.210e-22
Identity = 43/70 (61.43%), Postives = 54/70 (77.14%), Query Frame = 0 
Query:    3 KKVGREMWSTPTDAMDLVTSLKGTPGCYVKWDLDGSGRLNKIFWSTADQQLLAQQYGHLVIQDNTCLTNK 72
            +KV RE WSTPTDA+DLV+ LK   GCYVK+D DG  RL  +FWST  QQ+ A+Q+G +V+QDNT LTN+
Sbjct:   47 QKVQRECWSTPTDALDLVSELKDMAGCYVKYDTDGLHRLKHVFWSTGQQQVFARQWGGIVLQDNTALTNR 116
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BLAST of mRNA_M-pyrifera_M_contig113586.2839.1 vs. uniprot
Match: D7FLF6_ECTSI (Putative far-red impaired response protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLF6_ECTSI)

HSP 1 Score: 70.9 bits (172), Expect = 1.250e-12
Identity = 34/72 (47.22%), Postives = 49/72 (68.06%), Query Frame = 0 
Query:    1 MAKKVGREMWSTPTDAMDLVTSLKGTPGCYVKWDLDGSGRLNKIFWSTADQQLLAQQYGHLVIQDNTCLTNK 72
            M++KV  E+W++  DA++LV  L+      VKW+LD    L  I W++ +Q LLA+ YG +VIQDNTCLTN+
Sbjct:   25 MSRKVTGELWASSGDALELVAELERGNET-VKWELDAENILRSIMWASPEQILLARTYGGVVIQDNTCLTNR 95
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig113586.2839.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JEJ0_9PHAE4.210e-2261.43SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
D7FLF6_ECTSI1.250e-1247.22Putative far-red impaired response protein n=1 Tax... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig113586contigM-pyrifera_M_contig113586:147..365 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig113586.2839.1mRNA_M-pyrifera_M_contig113586.2839.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig113586 147..368 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig113586.2839.1 ID=prot_M-pyrifera_M_contig113586.2839.1|Name=mRNA_M-pyrifera_M_contig113586.2839.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=73bp
MAKKVGREMWSTPTDAMDLVTSLKGTPGCYVKWDLDGSGRLNKIFWSTAD
QQLLAQQYGHLVIQDNTCLTNK*
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