prot_M-pyrifera_M_contig113532.2822.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig113532.2822.1
Unique Nameprot_M-pyrifera_M_contig113532.2822.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length192
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig113532.2822.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 1..23
e-value: 9.0
score: 13.7
coord: 140..163
e-value: 0.011
score: 24.9
coord: 168..190
e-value: 2.5E-4
score: 30.4
coord: 29..52
e-value: 6.9
score: 14.7
coord: 85..108
e-value: 0.0093
score: 25.2
coord: 113..135
e-value: 0.015
score: 24.4
coord: 58..80
e-value: 240.0
score: 1.1
IPR013087Zinc finger C2H2-typePFAMPF00096zf-C2H2coord: 140..163
e-value: 7.3E-5
score: 23.0
coord: 168..190
e-value: 1.6E-6
score: 28.2
coord: 113..135
e-value: 1.6E-4
score: 21.9
coord: 86..108
e-value: 0.0019
score: 18.5
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 87..108
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 170..190
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 115..135
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 2..23
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 142..163
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 1..28
score: 12.279
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 113..140
score: 12.591
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 85..113
score: 11.905
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 140..168
score: 13.193
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 168..192
score: 13.526
NoneNo IPR availableGENE3D3.30.160.60coord: 167..192
e-value: 4.1E-8
score: 34.9
NoneNo IPR availableGENE3D3.30.160.60coord: 139..163
e-value: 2.8E-6
score: 29.2
NoneNo IPR availableGENE3D3.30.160.60coord: 52..111
e-value: 3.7E-5
score: 25.6
NoneNo IPR availableGENE3D3.30.160.60coord: 1..51
e-value: 4.6E-8
score: 35.4
NoneNo IPR availableGENE3D3.30.160.60coord: 112..138
e-value: 6.5E-6
score: 27.8
NoneNo IPR availablePANTHERPTHR24406FAMILY NOT NAMEDcoord: 74..192
coord: 1..136
NoneNo IPR availablePANTHERPTHR24406:SF11GDNF INDUCIBLE ZINC FINGER PROTEIN 1coord: 74..192
coord: 1..136
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 2..48
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 140..190
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 86..135

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig113532contigM-pyrifera_M_contig113532:1..576 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig113532.2822.1mRNA_M-pyrifera_M_contig113532.2822.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig113532 1..576 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig113532.2822.1 ID=prot_M-pyrifera_M_contig113532.2822.1|Name=mRNA_M-pyrifera_M_contig113532.2822.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=192bp
RCGECKKLFGQKGSLLTHLRHVHLNERRFGCDHCEYCAQTRQVLHRHILR
KHRPKVSITCNLCLRQMSLVSWPAHLRECHRGVSLRCEACGKEFKSSGGL
LHHKRSAHLGIRYSCPDCSKTFAGPSGLRAHKAAHSGVKHECVECGKKFS
HNGGLLRHQRSAHLGLRYSCPDCSKTFSDPSGLRRHKAIHAG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR036236Znf_C2H2_sf