prot_M-pyrifera_M_contig1131.2728.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig1131.2728.1
Unique Nameprot_M-pyrifera_M_contig1131.2728.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length122
Homology
BLAST of mRNA_M-pyrifera_M_contig1131.2728.1 vs. uniprot
Match: D7FJL2_ECTSI (DEAD box helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJL2_ECTSI)

HSP 1 Score: 225 bits (574), Expect = 5.590e-66
Identity = 116/120 (96.67%), Postives = 117/120 (97.50%), Query Frame = 0
Query:    1 LTDRLQTAVAQVVTIARSLGRLQRDCGLPVDPEENIKLNLNFGLVDVVYEWARGVPFCEITQITLVQEGSVVRAITRLDELCREVRNAARVIGDPTLYRKMEATSQLIKRDIVFAASLYV 120
            LTDRLQTAVAQV+ IARSLGRLQRD GLPVDPEENIKLNLN GLVDVVYEWARGVPFCEITQITLVQEGSVVRAITRLDELCREVRNAARVIGDPTLYRKMEATSQLIKRDIVFAASLYV
Sbjct: 1510 LTDRLQTAVAQVLKIARSLGRLQRDHGLPVDPEENIKLNLNLGLVDVVYEWARGVPFCEITQITLVQEGSVVRAITRLDELCREVRNAARVIGDPTLYRKMEATSQLIKRDIVFAASLYV 1629          
BLAST of mRNA_M-pyrifera_M_contig1131.2728.1 vs. uniprot
Match: A0A835Z0G0_9STRA (DEAD/DEAH box RNA helicase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0G0_9STRA)

HSP 1 Score: 169 bits (429), Expect = 6.330e-51
Identity = 86/120 (71.67%), Postives = 97/120 (80.83%), Query Frame = 0
Query:    1 LTDRLQTAVAQVVTIARSLGRLQRDCGLPVDPEENIKLNLNFGLVDVVYEWARGVPFCEITQITLVQEGSVVRAITRLDELCREVRNAARVIGDPTLYRKMEATSQLIKRDIVFAASLYV 120
            LT RLQ A A V  IAR LG LQ   GLP  P++    NLNFGLVDVVY+WARGVPF EI QITLVQEG++VR +TRLDEL REVRNAARV+GDPTLYRKMEATSQLI+R ++F ASLY+
Sbjct:  106 LTPRLQAARASVEGIARGLGALQAAHGLPTSPDDFAAQNLNFGLVDVVYDWARGVPFAEICQITLVQEGTIVRTVTRLDELLREVRNAARVVGDPTLYRKMEATSQLIRRGVIFCASLYL 225          
BLAST of mRNA_M-pyrifera_M_contig1131.2728.1 vs. uniprot
Match: A0A7S1GQ35_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GQ35_CYCTE)

HSP 1 Score: 155 bits (393), Expect = 3.420e-45
Identity = 79/121 (65.29%), Postives = 95/121 (78.51%), Query Frame = 0
Query:    1 LTDRLQTAVAQVVTIARSLGRLQRDCGLPVDPEENIKLNLNFGLVDVVYEWARGVPFCEITQITLVQEGSVVRAITRLDELCREVRNAARVIGDPTLYRKMEATSQLIKRDIVFAASLYVA 121
            L D L     ++ TIA +LG+LQ++ GL VDPEE  + +L FGLV VVYEWA GVPF  I ++TLVQEGS+VR ITRLDELCR+ RN ARV+G+PTLYRKMEA S  IKRDIVFA+SLYV+
Sbjct:  128 LPDTLVECCERMKTIAVNLGQLQKEHGLEVDPEEYCEASLKFGLVHVVYEWALGVPFSNICELTLVQEGSIVRCITRLDELCRDFRNCARVVGNPTLYRKMEAASTAIKRDIVFASSLYVS 248          
BLAST of mRNA_M-pyrifera_M_contig1131.2728.1 vs. uniprot
Match: A0A7S2WR62_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2WR62_9STRA)

HSP 1 Score: 149 bits (376), Expect = 6.600e-44
Identity = 73/121 (60.33%), Postives = 94/121 (77.69%), Query Frame = 0
Query:    1 LTDRLQTAVAQVVTIARSLGRLQRDCGLPVDPEENIKLNLNFGLVDVVYEWARGVPFCEITQITLVQEGSVVRAITRLDELCREVRNAARVIGDPTLYRKMEATSQLIKRDIVFAASLYVA 121
            L +RL+    ++  IA  LG+LQ++ GL VDP++  + ++ FGLV VVYEWA G+PF  I  +T+VQEGS+VR ITRLDELCRE+RN  RV+G+PTLYRKMEA S  IKRDIVFA+SLYV+
Sbjct:   27 LPERLRDTCEKMKLIAIHLGKLQKEHGLEVDPKDYCENSMKFGLVHVVYEWALGIPFSNICALTMVQEGSIVRCITRLDELCREIRNCTRVVGNPTLYRKMEAASVAIKRDIVFASSLYVS 147          
BLAST of mRNA_M-pyrifera_M_contig1131.2728.1 vs. uniprot
Match: A0A7S0CA57_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CA57_9STRA)

HSP 1 Score: 151 bits (382), Expect = 1.550e-42
Identity = 77/121 (63.64%), Postives = 93/121 (76.86%), Query Frame = 0
Query:    1 LTDRLQTAVAQVVTIARSLGRLQRDCGLPVDPEENIKLNLNFGLVDVVYEWARGVPFCEITQITLVQEGSVVRAITRLDELCREVRNAARVIGDPTLYRKMEATSQLIKRDIVFAASLYVA 121
            L +RL +   Q+  IA  LGR+Q++ GL +DP E    +L  GLV VVYEWA GVPF  I ++TLVQEGS+VR ITRLDELCREVRN ARV+G+PTLYR+MEA S  IKRDIVFA+SLYV+
Sbjct:  219 LPERLSSCCKQMRQIAIQLGRMQQEHGLSIDPNEYCAESLKMGLVHVVYEWALGVPFQRICELTLVQEGSIVRTITRLDELCREVRNCARVVGNPTLYRRMEAASVAIKRDIVFASSLYVS 339          
BLAST of mRNA_M-pyrifera_M_contig1131.2728.1 vs. uniprot
Match: A0A418AJ68_9STRA (DSHCT domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418AJ68_9STRA)

HSP 1 Score: 151 bits (382), Expect = 2.950e-42
Identity = 76/121 (62.81%), Postives = 92/121 (76.03%), Query Frame = 0
Query:    1 LTDRLQTAVAQVVTIARSLGRLQRDCGLPVDPEENIKLNLNFGLVDVVYEWARGVPFCEITQITLVQEGSVVRAITRLDELCREVRNAARVIGDPTLYRKMEATSQLIKRDIVFAASLYVA 121
            LT RL  A   V  IA SLG +Q +  L +DP E +K  LNFGL++VVYEW+RG+PF  I Q+T V EGS+VR +TRLDE+CREVRNAARVIGDP LYRKME  S+ IKRD+VFA SLY++
Sbjct:  248 LTPRLMDAQKTVQAIATSLGLIQLEAQLEIDPHEYVKSTLNFGLMEVVYEWSRGMPFQSICQLTDVPEGSIVRCMTRLDEVCREVRNAARVIGDPRLYRKMEIASESIKRDVVFATSLYLS 368          
BLAST of mRNA_M-pyrifera_M_contig1131.2728.1 vs. uniprot
Match: A0A812VLV3_SYMMI (SKI2 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812VLV3_SYMMI)

HSP 1 Score: 147 bits (372), Expect = 8.800e-42
Identity = 78/125 (62.40%), Postives = 95/125 (76.00%), Query Frame = 0
Query:    1 LTDRLQTAVAQVVTIARSLGRLQRDCGLPVDP----EENIKLNLNFGLVDVVYEWARGVPFCEITQITLVQEGSVVRAITRLDELCREVRNAARVIGDPTLYRKMEATSQLIKRDIVFAASLYVA 121
            LT RL+ A +Q V++A +L RLQ + G+ +       E +  +LNFGL   VYEWARGVPF EIT +T   EGS+VR ITRLDELCR+ RNAARV+G+P+LYRKMEATSQ IKRDIVFAASLYV+
Sbjct:  145 LTSRLELARSQEVSLASALLRLQEESGINMSALGGRGEGVAASLNFGLAAPVYEWARGVPFQEITGMTCTHEGSIVRTITRLDELCRDFRNAARVVGNPSLYRKMEATSQCIKRDIVFAASLYVS 269          
BLAST of mRNA_M-pyrifera_M_contig1131.2728.1 vs. uniprot
Match: A0A1E7FB68_9STRA (Antiviral helicase (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FB68_9STRA)

HSP 1 Score: 155 bits (393), Expect = 1.280e-41
Identity = 79/119 (66.39%), Postives = 94/119 (78.99%), Query Frame = 0
Query:    3 DRLQTAVAQVVTIARSLGRLQRDCGLPVDPEENIKLNLNFGLVDVVYEWARGVPFCEITQITLVQEGSVVRAITRLDELCREVRNAARVIGDPTLYRKMEATSQLIKRDIVFAASLYVA 121
            + L     ++ TIA +LG+LQ+D GL VDP +  + ++ FGLV VVYEWA GVPFCEI Q+T  QEGS+VR ITRLDELCREVRN ARV+G+PTLYRKMEA S  IKRDIVFAASLYV+
Sbjct:  838 ESLLNCCKRMKTIAINLGQLQKDHGLDVDPLDYAESSMKFGLVHVVYEWAIGVPFCEICQLTDAQEGSIVRCITRLDELCREVRNCARVVGNPTLYRKMEAASTAIKRDIVFAASLYVS 956          
BLAST of mRNA_M-pyrifera_M_contig1131.2728.1 vs. uniprot
Match: B7FTF8_PHATC (Predicted protein n=5 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FTF8_PHATC)

HSP 1 Score: 155 bits (392), Expect = 1.630e-41
Identity = 76/111 (68.47%), Postives = 93/111 (83.78%), Query Frame = 0
Query:   11 QVVTIARSLGRLQRDCGLPVDPEENIKLNLNFGLVDVVYEWARGVPFCEITQITLVQEGSVVRAITRLDELCREVRNAARVIGDPTLYRKMEATSQLIKRDIVFAASLYVA 121
            +++TIA +LGR+Q+D GL +DP E  + +LNFGLV VVYEWA GVPF  I  +T VQEGS+VR+ITRLDELCREVRN ARV+G+PTLYRK+EA S  IKRDIVFA+SLYV+
Sbjct:  762 RLITIALNLGRIQKDVGLDIDPAEYSESSLNFGLVHVVYEWALGVPFKSICDLTDVQEGSIVRSITRLDELCREVRNCARVVGNPTLYRKLEAASMTIKRDIVFASSLYVS 872          
BLAST of mRNA_M-pyrifera_M_contig1131.2728.1 vs. uniprot
Match: A0A7S4JTK5_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JTK5_9STRA)

HSP 1 Score: 155 bits (391), Expect = 2.440e-41
Identity = 79/116 (68.10%), Postives = 89/116 (76.72%), Query Frame = 0
Query:    5 LQTAVAQVVTIARSLGRLQRDCGLPVDPEENIKLNLNFGLVDVVYEWARGVPFCEITQITLVQEGSVVRAITRLDELCREVRNAARVIGDPTLYRKMEATSQLIKRDIVFAASLYV 120
            L     Q+  IA  LG +QRD GL +DPEE    +L FGLV VVYEWA GVPF  I ++TLVQEGS+VR ITRLDELCREVRN ARV+G+PTLYRKMEA S  IKRDIVFA+SLYV
Sbjct:  940 LAECCGQLKAIATKLGAMQRDHGLSIDPEEYCDGSLKFGLVHVVYEWALGVPFSNICELTLVQEGSIVRCITRLDELCREVRNCARVVGNPTLYRKMEAASTAIKRDIVFASSLYV 1055          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig1131.2728.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJL2_ECTSI5.590e-6696.67DEAD box helicase n=1 Tax=Ectocarpus siliculosus T... [more]
A0A835Z0G0_9STRA6.330e-5171.67DEAD/DEAH box RNA helicase (Fragment) n=1 Tax=Trib... [more]
A0A7S1GQ35_CYCTE3.420e-4565.29Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A7S2WR62_9STRA6.600e-4460.33Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7S0CA57_9STRA1.550e-4263.64Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A418AJ68_9STRA2.950e-4262.81DSHCT domain-containing protein n=1 Tax=Aphanomyce... [more]
A0A812VLV3_SYMMI8.800e-4262.40SKI2 protein n=1 Tax=Symbiodinium microadriaticum ... [more]
A0A1E7FB68_9STRA1.280e-4166.39Antiviral helicase (Fragment) n=1 Tax=Fragilariops... [more]
B7FTF8_PHATC1.630e-4168.47Predicted protein n=5 Tax=Phaeodactylum tricornutu... [more]
A0A7S4JTK5_9STRA2.440e-4168.10Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012961ATP-dependent RNA helicase Ski2, C-terminalSMARTSM01142DSHCT_2coord: 1..120
e-value: 7.4E-40
score: 148.4
IPR012961ATP-dependent RNA helicase Ski2, C-terminalPFAMPF08148DSHCTcoord: 3..115
e-value: 4.8E-30
score: 104.4
NoneNo IPR availableGENE3D1.10.3380.30coord: 1..111
e-value: 2.3E-38
score: 133.7
NoneNo IPR availablePANTHERPTHR12131ATP-DEPENDENT RNA AND DNA HELICASEcoord: 1..120
NoneNo IPR availablePANTHERPTHR12131:SF15DEXH-BOX ATP-DEPENDENT RNA HELICASE DEXH11coord: 1..120

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig1131contigM-pyrifera_M_contig1131:7686..9970 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig1131.2728.1mRNA_M-pyrifera_M_contig1131.2728.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig1131 7686..10129 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig1131.2728.1 ID=prot_M-pyrifera_M_contig1131.2728.1|Name=mRNA_M-pyrifera_M_contig1131.2728.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=122bp
LTDRLQTAVAQVVTIARSLGRLQRDCGLPVDPEENIKLNLNFGLVDVVYE
WARGVPFCEITQITLVQEGSVVRAITRLDELCREVRNAARVIGDPTLYRK
MEATSQLIKRDIVFAASLYVA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012961Ski2_C