prot_M-pyrifera_M_contig113081.2721.1 (polypeptide) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig113081.2721.1 vs. uniprot
Match: M2Y4U9_GALSU (U6 snRNA-associated Sm-like protein LSm3 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y4U9_GALSU) HSP 1 Score: 58.5 bits (140), Expect = 6.160e-10 Identity = 30/51 (58.82%), Postives = 37/51 (72.55%), Query Frame = 0
Query: 1 MNLMLSDAVETTFLKERDPDTGEELSEAKTRKLPMVYVRGDAVILLRPPPR 51
MNL+LSD ET E D +TGEEL +A RK+PM++VRGD VIL+ PP R
Sbjct: 38 MNLVLSDVEETALKVEVDDETGEELIKAVKRKMPMLFVRGDGVILVAPPLR 88
BLAST of mRNA_M-pyrifera_M_contig113081.2721.1 vs. uniprot
Match: A9UTK3_MONBE (U6 snRNA-associated Sm-like protein LSm3 n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9UTK3_MONBE) HSP 1 Score: 56.6 bits (135), Expect = 3.790e-9 Identity = 29/52 (55.77%), Postives = 37/52 (71.15%), Query Frame = 0
Query: 1 MNLMLSDAVETTFLKERDPDTGEELSEAKTRKLPMVYVRGDAVILLRPPPRA 52
MN++LS+ VET + D +TGEEL + R LPM+YVRGD VIL+ PP RA
Sbjct: 42 MNMVLSNVVETLATVDVDDETGEELVKTAKRVLPMLYVRGDGVILVAPPHRA 93
BLAST of mRNA_M-pyrifera_M_contig113081.2721.1 vs. uniprot
Match: A0A7E4V274_PANRE (U6 snRNA-associated Sm-like protein LSm3 n=1 Tax=Panagrellus redivivus TaxID=6233 RepID=A0A7E4V274_PANRE) HSP 1 Score: 54.7 bits (130), Expect = 2.720e-8 Identity = 23/51 (45.10%), Postives = 40/51 (78.43%), Query Frame = 0
Query: 1 MNLMLSDAVETTFLKERDPDTGEELSEAKTRKLPMVYVRGDAVILLRPPPR 51
+N++LSD VET + E DP++ EE+ ++ TR++P++++RGD+VIL+ P R
Sbjct: 50 LNMVLSDVVETINIVETDPESSEEIHKSTTREIPLLFIRGDSVILVSTPNR 100
BLAST of mRNA_M-pyrifera_M_contig113081.2721.1 vs. uniprot
Match: F2TZT7_SALR5 (U6 snRNA-associated Sm-like protein LSm3 n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2TZT7_SALR5) HSP 1 Score: 53.9 bits (128), Expect = 4.170e-8 Identity = 26/51 (50.98%), Postives = 36/51 (70.59%), Query Frame = 0
Query: 1 MNLMLSDAVETTFLKERDPDTGEELSEAKTRKLPMVYVRGDAVILLRPPPR 51
+N++LSD VET E D ++ EE+ + RK+PM+YVRGD VIL+ PP R
Sbjct: 41 LNMVLSDVVETITTSEIDEESYEEIIKTTERKMPMLYVRGDGVILVAPPMR 91
BLAST of mRNA_M-pyrifera_M_contig113081.2721.1 vs. uniprot
Match: A0A3P7UY54_HELPZ (Sm domain-containing protein n=3 Tax=Heligmosomoides polygyrus TaxID=6339 RepID=A0A3P7UY54_HELPZ) HSP 1 Score: 50.1 bits (118), Expect = 5.750e-7 Identity = 25/52 (48.08%), Postives = 35/52 (67.31%), Query Frame = 0
Query: 1 MNLMLSDAVETTFLKERDPDTGEELSEAKTRKLPMVYVRGDAVILLRPPPRA 52
MN++LS+ ET E D ++ EE+ R +PM+YVRGD+VIL+ PP RA
Sbjct: 1 MNMILSNVEETVTTSEVDEESFEEIYRQTKRTIPMLYVRGDSVILVSPPVRA 52
BLAST of mRNA_M-pyrifera_M_contig113081.2721.1 vs. uniprot
Match: A0A7J7JVD2_BUGNE (U6 snRNA-associated Sm-like protein LSm3 n=1 Tax=Bugula neritina TaxID=10212 RepID=A0A7J7JVD2_BUGNE) HSP 1 Score: 51.2 bits (121), Expect = 6.220e-7 Identity = 25/52 (48.08%), Postives = 36/52 (69.23%), Query Frame = 0
Query: 1 MNLMLSDAVETTFLKERDPDTGEELSEAKTRKLPMVYVRGDAVILLRPPPRA 52
+N++L DA ET E D +T EE+ ++ R +PM++VRGD VIL+ PP RA
Sbjct: 49 LNMILGDAEETVTTVEIDDETYEEIYKSTKRTIPMLFVRGDGVILISPPMRA 100
BLAST of mRNA_M-pyrifera_M_contig113081.2721.1 vs. uniprot
Match: A0A2P4W7B6_CAERE (Sm domain-containing protein n=1 Tax=Caenorhabditis remanei TaxID=31234 RepID=A0A2P4W7B6_CAERE) HSP 1 Score: 50.1 bits (118), Expect = 7.730e-7 Identity = 25/52 (48.08%), Postives = 36/52 (69.23%), Query Frame = 0
Query: 1 MNLMLSDAVETTFLKERDPDTGEELSEAKTRKLPMVYVRGDAVILLRPPPRA 52
+N++LS+ ET +E D DT EE+ R +PM++VRGD+VIL+ PP RA
Sbjct: 14 LNMVLSEVEETITTREVDEDTFEEIYRQTKRVVPMLFVRGDSVILVSPPIRA 65
BLAST of mRNA_M-pyrifera_M_contig113081.2721.1 vs. uniprot
Match: F4PV45_CAVFA (U6 snRNA-associated Sm-like protein LSm3 n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4PV45_CAVFA) HSP 1 Score: 50.8 bits (120), Expect = 7.740e-7 Identity = 24/52 (46.15%), Postives = 38/52 (73.08%), Query Frame = 0
Query: 1 MNLMLSDAVETTFLKERDPDTGEELSEAKTRKLPMVYVRGDAVILLRPPPRA 52
+N++LSD ET + E+D +T EE+ ++ RK+ M++VRGD VIL+ PP R+
Sbjct: 45 LNMILSDVEETIRVVEKDEETDEEIVKSIKRKIKMLFVRGDGVILISPPLRS 96
BLAST of mRNA_M-pyrifera_M_contig113081.2721.1 vs. uniprot
Match: D6WUX0_TRICA (U6 snRNA-associated Sm-like protein LSm3 n=14 Tax=Polyphaga TaxID=41084 RepID=D6WUX0_TRICA) HSP 1 Score: 50.8 bits (120), Expect = 8.430e-7 Identity = 26/51 (50.98%), Postives = 34/51 (66.67%), Query Frame = 0
Query: 1 MNLMLSDAVETTFLKERDPDTGEELSEAKTRKLPMVYVRGDAVILLRPPPR 51
MN++LSDA ET E D +T EE+ R +PM++VRGD VIL+ PP R
Sbjct: 49 MNMILSDAEETITTVEIDEETYEEVYRTTKRNIPMLFVRGDGVILVSPPMR 99
BLAST of mRNA_M-pyrifera_M_contig113081.2721.1 vs. uniprot
Match: UPI00083BF8BC (U6 snRNA-associated Sm-like protein LSm3 n=3 Tax=Polyphaga TaxID=41084 RepID=UPI00083BF8BC) HSP 1 Score: 50.8 bits (120), Expect = 8.620e-7 Identity = 26/51 (50.98%), Postives = 35/51 (68.63%), Query Frame = 0
Query: 1 MNLMLSDAVETTFLKERDPDTGEELSEAKTRKLPMVYVRGDAVILLRPPPR 51
MN++LSDA ET E D +T EE+ + R +PM++VRGD VIL+ PP R
Sbjct: 50 MNMVLSDAEETITTVEIDEETYEEVYRSTKRTIPMLFVRGDGVILVSPPMR 100 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig113081.2721.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_M-pyrifera_M_contig113081.2721.1 ID=prot_M-pyrifera_M_contig113081.2721.1|Name=mRNA_M-pyrifera_M_contig113081.2721.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=53bpback to top |