prot_M-pyrifera_M_contig113059.2715.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig113059.2715.1
Unique Name	prot_M-pyrifera_M_contig113059.2715.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	102

Homology

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BLAST of mRNA_M-pyrifera_M_contig113059.2715.1 vs. uniprot
Match: A0A3D5DC78_9GAMM (YjgF_endoribonc domain-containing protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D5DC78_9GAMM)

HSP 1 Score: 159 bits (403), Expect = 3.170e-48
Identity = 83/99 (83.84%), Postives = 92/99 (92.93%), Query Frame = 0

Query:    1 GLDLSIEEGREAARLSSLNVLAQASAALDGDLDRIRQIAKVSGFVNCAAEVTEVAAVVNGASELFLDIFGERGAHARVAVGATTMPIGVAVEIEAIMEI 99
            G++ SIE+GREAARLS+LNVLAQA  AL GDLDRI+QIAKVSGFVNC  E+TEVA VVNGASELFL+IFGERGAHARVAVGATTMP+GVAVEIEAIME+
Sbjct:   57 GVEFSIEQGREAARLSALNVLAQARRALGGDLDRIKQIAKVSGFVNCTPEITEVATVVNGASELFLEIFGERGAHARVAVGATTMPLGVAVEIEAIMEV 155

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BLAST of mRNA_M-pyrifera_M_contig113059.2715.1 vs. uniprot
Match: A0A7Y0E030_9PROT (RidA family protein n=1 Tax=Pacificispira spongiicola TaxID=2729598 RepID=A0A7Y0E030_9PROT)

HSP 1 Score: 125 bits (313), Expect = 1.420e-34
Identity = 63/100 (63.00%), Postives = 83/100 (83.00%), Query Frame = 0

Query:    1 GLDLSIEEGREAARLSSLNVLAQASAALDGDLDRIRQIAKVSGFVNCAAEVTEVAAVVNGASELFLDIFGERGAHARVAVGATTMPIGVAVEIEAIMEIA 100
            G DL++EEG+EAAR+ +LN++AQA AALDGDLDRI +I K+ GFVNC A+ T+   V+NGAS L  DIFGE+GAHAR A+GA ++P+ VAVEI+A++EIA
Sbjct:   56 GGDLTLEEGQEAARVCALNIIAQAKAALDGDLDRIVRIVKLGGFVNCPADFTDHPKVINGASNLIGDIFGEKGAHARFAMGAGSLPLNVAVEIDAVIEIA 155

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BLAST of mRNA_M-pyrifera_M_contig113059.2715.1 vs. uniprot
Match: A0A381Y852_9ZZZZ (YjgF_endoribonc domain-containing protein n=1 Tax=marine metagenome TaxID=408172 RepID=A0A381Y852_9ZZZZ)

HSP 1 Score: 124 bits (310), Expect = 4.540e-34
Identity = 66/99 (66.67%), Postives = 79/99 (79.80%), Query Frame = 0

Query:    1 GLDLSIEEGREAARLSSLNVLAQASAALDGDLDRIRQIAKVSGFVNCAAEVTEVAAVVNGASELFLDIFGERGAHARVAVGATTMPIGVAVEIEAIMEI 99
            G +L++EEGREAARLS+LNVLA    AL GDLDRI +  KV+GFV+   +  EVAAVVNGASEL  +IFG+ G HAR+A+GA  MPIGVAVEIEAI+EI
Sbjct:   57 GKNLTLEEGREAARLSTLNVLAHTRNALAGDLDRINRFLKVNGFVSVTEDFDEVAAVVNGASELLQEIFGDAGTHARIAIGAANMPIGVAVEIEAIIEI 155

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BLAST of mRNA_M-pyrifera_M_contig113059.2715.1 vs. uniprot
Match: UPI001A96A976 (RidA family protein n=1 Tax=Azospirillum sp. SYSU D00513 TaxID=2812561 RepID=UPI001A96A976)

HSP 1 Score: 119 bits (297), Expect = 3.790e-32
Identity = 60/100 (60.00%), Postives = 77/100 (77.00%), Query Frame = 0

Query:    1 GLDLSIEEGREAARLSSLNVLAQASAALDGDLDRIRQIAKVSGFVNCAAEVTEVAAVVNGASELFLDIFGERGAHARVAVGATTMPIGVAVEIEAIMEIA 100
            G D ++E+GREAARL  LN+LAQA AAL GDLDR+ ++ ++ GFVN  A+  +  AV+NGASEL LD+FGE G HAR AVGA ++P  VAVE++AI EIA
Sbjct:   56 GQDFTVEQGREAARLCGLNILAQARAALGGDLDRVVRVLRLGGFVNSGADFHDHPAVINGASELMLDVFGEAGKHARAAVGAPSLPANVAVEVDAIFEIA 155

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BLAST of mRNA_M-pyrifera_M_contig113059.2715.1 vs. uniprot
Match: A0A6N7FGF2_9PROT (RidA family protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A6N7FGF2_9PROT)

HSP 1 Score: 119 bits (297), Expect = 4.010e-32
Identity = 59/95 (62.11%), Postives = 73/95 (76.84%), Query Frame = 0

Query:    1 GLDLSIEEGREAARLSSLNVLAQASAALDGDLDRIRQIAKVSGFVNCAAEVTEVAAVVNGASELFLDIFGERGAHARVAVGATTMPIGVAVEIEA 95
            G D ++ EGREAARLS+LNVLA A AAL GDLDRI ++AK+ G+VN   ++T VA VVNGASEL +++FGE G HAR   G T MP GVA+E+EA
Sbjct:   57 GADFTVAEGREAARLSALNVLAHARAALGGDLDRIEKVAKLRGYVNATEDLTMVAEVVNGASELMVEVFGEAGQHARTVAGVTVMPFGVAIEVEA 151

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BLAST of mRNA_M-pyrifera_M_contig113059.2715.1 vs. uniprot
Match: A0A2E4XT31_9PROT (YjgF_endoribonc domain-containing protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E4XT31_9PROT)

HSP 1 Score: 118 bits (296), Expect = 5.370e-32
Identity = 55/97 (56.70%), Postives = 79/97 (81.44%), Query Frame = 0

Query:    1 GLDLSIEEGREAARLSSLNVLAQASAALDGDLDRIRQIAKVSGFVNCAAEVTEVAAVVNGASELFLDIFGERGAHARVAVGATTMPIGVAVEIEAIM 97
            G D S+E+ ++AAR+  LN++AQA AALDGDLDR+R+I KV GFVNC  +  +  A++NGAS+LF+++FG+ G HAR AVGA ++P+GVAVE++AI+
Sbjct:   56 GDDYSVEDAQQAARVCGLNIIAQAKAALDGDLDRVRRIVKVGGFVNCVTDFGQHPAIINGASDLFVEVFGDAGRHARFAVGAGSLPMGVAVEVDAII 152

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BLAST of mRNA_M-pyrifera_M_contig113059.2715.1 vs. uniprot
Match: A0A127CHJ0_9HYPH (YjgF_endoribonc domain-containing protein n=6 Tax=Hyphomicrobiales TaxID=356 RepID=A0A127CHJ0_9HYPH)

HSP 1 Score: 118 bits (295), Expect = 7.620e-32
Identity = 58/99 (58.59%), Postives = 78/99 (78.79%), Query Frame = 0

Query:    1 GLDLSIEEGREAARLSSLNVLAQASAALDGDLDRIRQIAKVSGFVNCAAEVTEVAAVVNGASELFLDIFGERGAHARVAVGATTMPIGVAVEIEAIMEI 99
            G D+S+EEGR+AAR  ++N++AQ +AALDGDLDR+++I K+SGFV  A + TE   V+NGAS+LF D+FGE G HAR AVG   +P+  AVEI+AI+EI
Sbjct:   56 GADVSLEEGRKAARACAINIIAQINAALDGDLDRVKRILKLSGFVASAPDFTEQHLVINGASDLFADVFGEAGKHARAAVGMAALPLNAAVEIDAIVEI 154

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BLAST of mRNA_M-pyrifera_M_contig113059.2715.1 vs. uniprot
Match: A0A239EDW1_9PROT (Enamine deaminase RidA, house cleaning of reactive enamine intermediates, YjgF/YER057c/UK114 family n=2 Tax=Azospirillaceae TaxID=2829815 RepID=A0A239EDW1_9PROT)

HSP 1 Score: 116 bits (291), Expect = 3.080e-31
Identity = 59/100 (59.00%), Postives = 76/100 (76.00%), Query Frame = 0

Query:    1 GLDLSIEEGREAARLSSLNVLAQASAALDGDLDRIRQIAKVSGFVNCAAEVTEVAAVVNGASELFLDIFGERGAHARVAVGATTMPIGVAVEIEAIMEIA 100
            G   SIEEGREAAR  +LN++AQA AALDGDLDRI ++ K+ GFVN   +  +   V+NGASEL  ++FGE G HAR AV A+++P+GVAVE+EAI E+A
Sbjct:   56 GAGYSIEEGREAARTCALNLIAQAKAALDGDLDRITRVVKLVGFVNSTGDFNDQPKVINGASELMQEVFGEAGRHARSAVSASSLPLGVAVEVEAIFEVA 155

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BLAST of mRNA_M-pyrifera_M_contig113059.2715.1 vs. uniprot
Match: A0A8J7V1K4_9PROT (RidA family protein n=1 Tax=Marivibrio halodurans TaxID=2039722 RepID=A0A8J7V1K4_9PROT)

HSP 1 Score: 116 bits (291), Expect = 3.080e-31
Identity = 58/100 (58.00%), Postives = 76/100 (76.00%), Query Frame = 0

Query:    1 GLDLSIEEGREAARLSSLNVLAQASAALDGDLDRIRQIAKVSGFVNCAAEVTEVAAVVNGASELFLDIFGERGAHARVAVGATTMPIGVAVEIEAIMEIA 100
            G D S+EEG+EAAR  +LN++AQ   ALDGDLDR+ +I K+ GFVN   + T+   V+NGAS L  DIFGE+G H R AVGA ++P+GVAVE+EAI+E+A
Sbjct:   56 GRDFSLEEGQEAARACALNIVAQVKRALDGDLDRVARIVKLGGFVNSTPDYTDHPKVINGASNLMGDIFGEKGQHTRFAVGAGSLPLGVAVEVEAIVEVA 155

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BLAST of mRNA_M-pyrifera_M_contig113059.2715.1 vs. uniprot
Match: A0A2E4GZW0_9PROT (YjgF_endoribonc domain-containing protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E4GZW0_9PROT)

HSP 1 Score: 115 bits (289), Expect = 6.190e-31
Identity = 57/99 (57.58%), Postives = 78/99 (78.79%), Query Frame = 0

Query:    1 GLDLSIEEGREAARLSSLNVLAQASAALDGDLDRIRQIAKVSGFVNCAAEVTEVAAVVNGASELFLDIFGERGAHARVAVGATTMPIGVAVEIEAIMEI 99
            G D SIE  ++AAR+  LN++AQA AAL GDLDR+R+I KV GFVNC    ++  AV+NGAS+LF+++FG+ G HAR AVGA ++P+GVAVE++AI+ I
Sbjct:   56 GDDYSIENAQKAARICGLNIIAQAKAALKGDLDRVRRIVKVGGFVNCTNGFSQHPAVINGASDLFVEVFGDAGRHARFAVGAASLPMGVAVEVDAIIVI 154

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig113059.2715.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig113059.2715.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A3D5DC78_9GAMM	3.170e-48	83.84	YjgF_endoribonc domain-containing protein n=1 Tax=...	[more]
A0A7Y0E030_9PROT	1.420e-34	63.00	RidA family protein n=1 Tax=Pacificispira spongiic...	[more]
A0A381Y852_9ZZZZ	4.540e-34	66.67	YjgF_endoribonc domain-containing protein n=1 Tax=...	[more]
UPI001A96A976	3.790e-32	60.00	RidA family protein n=1 Tax=Azospirillum sp. SYSU ...	[more]
A0A6N7FGF2_9PROT	4.010e-32	62.11	RidA family protein n=1 Tax=Alphaproteobacteria ba...	[more]
A0A2E4XT31_9PROT	5.370e-32	56.70	YjgF_endoribonc domain-containing protein n=1 Tax=...	[more]
A0A127CHJ0_9HYPH	7.620e-32	58.59	YjgF_endoribonc domain-containing protein n=6 Tax=...	[more]
A0A239EDW1_9PROT	3.080e-31	59.00	Enamine deaminase RidA, house cleaning of reactive...	[more]
A0A8J7V1K4_9PROT	3.080e-31	58.00	RidA family protein n=1 Tax=Marivibrio halodurans ...	[more]
A0A2E4GZW0_9PROT	6.190e-31	57.58	YjgF_endoribonc domain-containing protein n=1 Tax=...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013813	Endoribonuclease L-PSP/chorismate mutase-like	PFAM	PF14588	YjgF_endoribonc	coord: 1..97 e-value: 3.7E-22 score: 79.1
IPR035959	RutC-like superfamily	GENE3D	3.30.1330.40		coord: 1..99 e-value: 6.9E-36 score: 124.9
IPR035959	RutC-like superfamily	SUPERFAMILY	55298	YjgF-like	coord: 3..99
None	No IPR available	PANTHER	PTHR43760	FAMILY NOT NAMED	coord: 1..99

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig113059	contig	M-pyrifera_M_contig113059:275..580 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig113059.2715.1	mRNA_M-pyrifera_M_contig113059.2715.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig113059 275..580 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig113059.2715.1 ID=prot_M-pyrifera_M_contig113059.2715.1|Name=mRNA_M-pyrifera_M_contig113059.2715.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=102bp
GLDLSIEEGREAARLSSLNVLAQASAALDGDLDRIRQIAKVSGFVNCAAE
VTEVAAVVNGASELFLDIFGERGAHARVAVGATTMPIGVAVEIEAIMEIA
P*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR013813	Endoribo_LPSP/chorism_mut-like
IPR035959	RutC-like_sf