prot_M-pyrifera_M_contig1130.2702.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig1130.2702.1
Unique Nameprot_M-pyrifera_M_contig1130.2702.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length182
Homology
BLAST of mRNA_M-pyrifera_M_contig1130.2702.1 vs. uniprot
Match: D7FLT7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLT7_ECTSI)

HSP 1 Score: 195 bits (496), Expect = 9.260e-61
Identity = 112/182 (61.54%), Postives = 138/182 (75.82%), Query Frame = 0
Query:    1 MRLLLLAAAFIAPCCIDSFTLQHRVPVGANAVRATSSSHQCCSS-TVMTLPSA--LNRLAGTVLLGGALVATGVVTGAEVARADVSISPRCITGEGAQCDDLSEGNEFIKSLQAKSALSKDRYFQETLDNYNYHNFKGEAAHYFRAENKHMVKHKDGKYEILTNAEYTQAEKEGTVKNEAFV 179
            MRL ++ AA + P C++SF +    P  +++    S+S +C S+ T+MTLP+A  LNR  G VL+GGAL+ TG +   +VARADVSISPRCITGEGAQC+DL+EGNE IKSLQAKSA+SKDRYFQETLD YN HNFK     YF+AE+KHMVKH  GKYEILTNAEY  AEK G V+N+ F+
Sbjct:    1 MRLHVILAALVGPSCVESFAVLCTAP--SSSTSPVSTSLRCRSTRTMMTLPTAGDLNRALGAVLVGGALI-TGAM---DVARADVSISPRCITGEGAQCEDLAEGNELIKSLQAKSAISKDRYFQETLDTYNVHNFKD----YFKAESKHMVKHNTGKYEILTNAEYAAAEKAGKVRNDVFL 172          
BLAST of mRNA_M-pyrifera_M_contig1130.2702.1 vs. uniprot
Match: A0A7S2UQ54_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UQ54_9STRA)

HSP 1 Score: 74.3 bits (181), Expect = 3.070e-13
Identity = 47/110 (42.73%), Postives = 67/110 (60.91%), Query Frame = 0
Query:   67 VATGVVTGAEVARADVSISPRCITGEGAQCDDLSEGNEFIKSLQAKSALSKDRYFQETLDNYNYHNFKGEAAHYFRAENKHMVKHKDGKYEILTNAEYTQAEKEGTVKNE 176
            VA+G+   +  A A +S S RC +GEG  C DL+EGN++IKSLQ KSA +K+ Y QE L+ YN  N+    A       K++VK  DGK+ + T+AE +  +  G +K E
Sbjct:   65 VASGLFLSSTPANAVLS-SGRCASGEGEGCTDLAEGNDYIKSLQIKSAANKEMYAQEALNAYNMKNYPDFFASL--TPPKYLVKGLDGKFLVYTDAELSVLKGAGKIKLE 171          
BLAST of mRNA_M-pyrifera_M_contig1130.2702.1 vs. uniprot
Match: A0A7S4QE00_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QE00_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 5.940e-13
Identity = 45/124 (36.29%), Postives = 66/124 (53.23%), Query Frame = 0
Query:   55 RLAGTVLLGGALVATGVVTGAEVARADVSISPRCITGEGAQCDDLSEGNEFIKSLQAKSALSKDRYFQETLDNYNYHNFKGEAAHYFRAEN--KHMVKHKDGKYEILTNAEYTQAEKEGTVKNE 176
            R+ G+++       +  +     A A +  S  C +GEGA CD+L+  NEFIKSLQ KSA  K++Y QE  + YN  N+      YF + N  K +VK KDG + + T +E     + G +K E
Sbjct:   70 RIFGSIIASALFGGSATLLRPNDANAAILSSEGCASGEGAACDELAGDNEFIKSLQKKSAAKKEQYLQEARNAYNNKNY----PDYFASLNPPKFLVKKKDGSFNVYTQSELDALVQAGKIKTE 189          
BLAST of mRNA_M-pyrifera_M_contig1130.2702.1 vs. uniprot
Match: A0A7S2IAD5_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2IAD5_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 3.840e-10
Identity = 45/120 (37.50%), Postives = 66/120 (55.00%), Query Frame = 0
Query:   64 GALVATGVVTGAEV-----ARADVSISPRCITGEGAQCDDLSEGNEFIKSLQAKSALSKDRYFQETLDNYNYHNFKGEAAHYFRAEN--KHMVKHKDGKYEILTNAEYTQAEKEGTVKNE 176
            G++VA+  + G  +     A A V  S  C +GEG  C +L+  NEFIKSLQ KSA  K++Y QE  + YN  N+      YF + +  K +VK +DG + + T +E T   + G +K E
Sbjct:   87 GSVVASTFLAGTTMLSPNKAEAAVLSSAGCASGEGDACAELAGDNEFIKSLQKKSAEKKEQYLQEARNAYNNKNY----PDYFASLSPPKFLVKKQDGTFNVYTESELTPLVQAGKIKTE 202          
BLAST of mRNA_M-pyrifera_M_contig1130.2702.1 vs. uniprot
Match: B7G784_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G784_PHATC)

HSP 1 Score: 53.9 bits (128), Expect = 2.300e-6
Identity = 35/73 (47.95%), Postives = 40/73 (54.79%), Query Frame = 0
Query:   51 SALNRLAGTVLLGGALVATGVVTGAEVARADVSISPR-CITGEGAQCDDLSEGNEFIKSLQAKSALSKDRYFQ 122
            SA NR A    +G A    G         AD  IS + C +G G  CDDLSEGNE IKSLQ KSA  +D+Y Q
Sbjct:   25 SARNRRA---FIGSAAALIGGTNFVTFESADALISSKYCASGVGDGCDDLSEGNELIKSLQEKSAAKRDQYAQ 94          
BLAST of mRNA_M-pyrifera_M_contig1130.2702.1 vs. uniprot
Match: A0A7S4QEZ8_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QEZ8_9STRA)

HSP 1 Score: 53.5 bits (127), Expect = 7.270e-6
Identity = 27/68 (39.71%), Postives = 39/68 (57.35%), Query Frame = 0
Query:   55 RLAGTVLLGGALVATGVVTGAEVARADVSISPRCITGEGAQCDDLSEGNEFIKSLQAKSALSKDRYFQ 122
            R+ G+++       +  +     A A +  S  C +GEGA CD+L+  NEFIKSLQ KSA  K++Y Q
Sbjct:   70 RIFGSIIASALFGGSATLLRPNDANAAILSSEGCASGEGAACDELAGDNEFIKSLQKKSAAKKEQYLQ 137          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig1130.2702.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7FLT7_ECTSI9.260e-6161.54Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2UQ54_9STRA3.070e-1342.73Hypothetical protein (Fragment) n=1 Tax=Attheya se... [more]
A0A7S4QE00_9STRA5.940e-1336.29Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A7S2IAD5_9STRA3.840e-1037.50Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
B7G784_PHATC2.300e-647.95Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A7S4QEZ8_9STRA7.270e-639.71Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..34
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..34
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 35..181
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..16
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..18
score: 0.653

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig1130contigM-pyrifera_M_contig1130:17466..27737 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig1130.2702.1mRNA_M-pyrifera_M_contig1130.2702.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig1130 16219..27757 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig1130.2702.1 ID=prot_M-pyrifera_M_contig1130.2702.1|Name=mRNA_M-pyrifera_M_contig1130.2702.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=182bp
MRLLLLAAAFIAPCCIDSFTLQHRVPVGANAVRATSSSHQCCSSTVMTLP
SALNRLAGTVLLGGALVATGVVTGAEVARADVSISPRCITGEGAQCDDLS
EGNEFIKSLQAKSALSKDRYFQETLDNYNYHNFKGEAAHYFRAENKHMVK
HKDGKYEILTNAEYTQAEKEGTVKNEAFVED*
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