prot_M-pyrifera_M_contig112907.2682.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig112907.2682.1
Unique Nameprot_M-pyrifera_M_contig112907.2682.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length127
Homology
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BLAST of mRNA_M-pyrifera_M_contig112907.2682.1 vs. uniprot
Match: UPI0009A35FF3 (WD repeat-containing protein 5-like n=1 Tax=Rhincodon typus TaxID=259920 RepID=UPI0009A35FF3)

HSP 1 Score: 108 bits (271), Expect = 8.680e-28
Identity = 81/108 (75.00%), Postives = 89/108 (82.41%), Query Frame = 0 
Query:   20 SRIWDASKGMCLKTLNIDDNNSPVSFVKFSPNGKFILASTLDSTLXXXXXXXXXXXXXYTGHRNEMYCCFATFSVTNXXXXXXXXXXXXXXXXXXXSKAVVQKLTGHT 127
            SRIWD + G CLKTL IDD+N PVSFVKFSPNGK+ILA+TLD+TL  XXXXXXXXXXXYTGH+NE YC FA FSVT    XXXXXXXXXXXXX   +K +VQKL GHT
Sbjct:   17 SRIWDTASGQCLKTL-IDDDNPPVSFVKFSPNGKYILAATLDNTLKLXXXXXXXXXXXYTGHKNEKYCIFANFSVTGGKWXXXXXXXXXXXXXNLQTKEIVQKLQGHT 123
[Close]
BLAST of mRNA_M-pyrifera_M_contig112907.2682.1 vs. uniprot
Match: UPI001C4B3C5D (WD repeat-containing protein 5-like n=1 Tax=Plectropomus leopardus TaxID=160734 RepID=UPI001C4B3C5D)

HSP 1 Score: 105 bits (263), Expect = 6.250e-27
Identity = 65/107 (60.75%), Postives = 74/107 (69.16%), Query Frame = 0 
Query:   21 RIWDASKGMCLKTLNIDDNNSPVSFVKFSPNGKFILASTLDSTLXXXXXXXXXXXXXYTGHRNEMYCCFATFSVTNXXXXXXXXXXXXXXXXXXXSKAVVQKLTGHT 127
            RIWD + G CLKTL IDD+N PVSFVKFSPNGK+ILA+TLD+TL  XXXXXXXXXX Y+GH+NE YC FA FSVT                    +K +VQKL GHT
Sbjct:    1 RIWDTASGQCLKTL-IDDDNPPVSFVKFSPNGKYILAATLDNTLKLXXXXXXXXXXTYSGHKNEKYCIFANFSVTGGKWIVSGSEDSMVYIWNLQTKEIVQKLQGHT 106
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BLAST of mRNA_M-pyrifera_M_contig112907.2682.1 vs. uniprot
Match: A0A0B6ZN80_9EUPU (Uncharacterized protein (Fragment) n=3 Tax=Protostomia TaxID=33317 RepID=A0A0B6ZN80_9EUPU)

HSP 1 Score: 105 bits (261), Expect = 1.710e-26
Identity = 80/106 (75.47%), Postives = 86/106 (81.13%), Query Frame = 0 
Query:   22 IWDASKGMCLKTLNIDDNNSPVSFVKFSPNGKFILASTLDSTLXXXXXXXXXXXXXYTGHRNEMYCCFATFSVTNXXXXXXXXXXXXXXXXXXXSKAVVQKLTGHT 127
            IWD + G CLKTL IDD+N PVSFVKFSPNGK+ILA+TLD+TL  XXXXXXXXXXXY GHRNE YC FA FSVT    XXXXXXXXXXXXX   +K VVQKL GHT
Sbjct:    1 IWDTASGQCLKTL-IDDDNPPVSFVKFSPNGKYILAATLDNTLKLXXXXXXXXXXXYLGHRNEKYCVFANFSVTGGKWXXXXXXXXXXXXXNLQTKEVVQKLAGHT 105
[Close]
BLAST of mRNA_M-pyrifera_M_contig112907.2682.1 vs. uniprot
Match: A0A401RL75_CHIPU (Uncharacterized protein (Fragment) n=1 Tax=Chiloscyllium punctatum TaxID=137246 RepID=A0A401RL75_CHIPU)

HSP 1 Score: 107 bits (267), Expect = 3.400e-25
Identity = 67/107 (62.62%), Postives = 75/107 (70.09%), Query Frame = 0 
Query:   21 RIWDASKGMCLKTLNIDDNNSPVSFVKFSPNGKFILASTLDSTLXXXXXXXXXXXXXYTGHRNEMYCCFATFSVTNXXXXXXXXXXXXXXXXXXXSKAVVQKLTGHT 127
            RIWD + G CLKTL IDD+N PVSFVKFSPNGK+ILA+TLD+TL  XXXXXXXXXXXYTGH+NE YC FA FSVT                    +K +VQKL GHT
Sbjct:  245 RIWDTASGQCLKTL-IDDDNPPVSFVKFSPNGKYILAATLDNTLKLXXXXXXXXXXXYTGHKNEKYCIFANFSVTGGKWIVSGSEDNFVYIWNLQTKEIVQKLQGHT 350
[Close]
BLAST of mRNA_M-pyrifera_M_contig112907.2682.1 vs. uniprot
Match: A0A8J2MLL8_COTCN (Similar to wdr5: WD repeat-containing protein 5 (Xenopus tropicalis) n=2 Tax=Braconidae TaxID=7402 RepID=A0A8J2MLL8_COTCN)

HSP 1 Score: 108 bits (271), Expect = 3.760e-25
Identity = 71/115 (61.74%), Postives = 80/115 (69.57%), Query Frame = 0 
Query:   13 SPLLTRGSRIWDASKGMCLKTLNIDDNNSPVSFVKFSPNGKFILASTLDSTLXXXXXXXXXXXXXYTGHRNEMYCCFATFSVTNXXXXXXXXXXXXXXXXXXXSKAVVQKLTGHT 127
            S +++  SRIWD + G CLKTL IDD+N PVSFVKFSPNGK+ILA+TLD+TL XXXXXXXXXXXXYT HRNE YC FA FSVT                    +K VVQKL GHT
Sbjct:  201 SIIISLNSRIWDTASGQCLKTL-IDDDNPPVSFVKFSPNGKYILAATLDNTLKXXXXXXXXXXXXYTSHRNEKYCIFANFSVTGGKWIVSGSEDNMVYIWNLQTKEVVQKLQGHT 314
[Close]
BLAST of mRNA_M-pyrifera_M_contig112907.2682.1 vs. uniprot
Match: S9YV77_CAMFR (WD repeat-containing protein 5 n=1 Tax=Camelus ferus TaxID=419612 RepID=S9YV77_CAMFR)

HSP 1 Score: 99.8 bits (247), Expect = 8.820e-23
Identity = 60/77 (77.92%), Postives = 66/77 (85.71%), Query Frame = 0 
Query:   19 GSRIWDASKGMCLKTLNIDDNNSPVSFVKFSPNGKFILASTLDSTLXXXXXXXXXXXXXYTGHRNEMYCCFATFSVT 95
            G RIWD + G CLKTL IDD+N PVSFVKFSPNGK+ILA+TLD+TL  XXXXXXXXXXXYTGH+NE YC FA FSVT
Sbjct:  167 GCRIWDTASGQCLKTL-IDDDNPPVSFVKFSPNGKYILAATLDNTLKLXXXXXXXXXXXYTGHKNEKYCIFANFSVT 242
[Close]
BLAST of mRNA_M-pyrifera_M_contig112907.2682.1 vs. uniprot
Match: A0A0L7K5C8_9NEOP (Will die slowly (Fragment) n=1 Tax=Operophtera brumata TaxID=104452 RepID=A0A0L7K5C8_9NEOP)

HSP 1 Score: 95.9 bits (237), Expect = 1.140e-22
Identity = 57/75 (76.00%), Postives = 63/75 (84.00%), Query Frame = 0 
Query:   21 RIWDASKGMCLKTLNIDDNNSPVSFVKFSPNGKFILASTLDSTLXXXXXXXXXXXXXYTGHRNEMYCCFATFSVT 95
            RIWD + G CLKTL IDD+N PVSFVKFSPNGK+ILA+TLD+TL  XXXXXXXXXX Y GH+NE YC FA FSVT
Sbjct:    1 RIWDTASGQCLKTL-IDDDNPPVSFVKFSPNGKYILAATLDNTLKLXXXXXXXXXXTYNGHKNEKYCIFANFSVT 74
[Close]
BLAST of mRNA_M-pyrifera_M_contig112907.2682.1 vs. uniprot
Match: A0A0L7LPH8_9NEOP (Will die slowly n=1 Tax=Operophtera brumata TaxID=104452 RepID=A0A0L7LPH8_9NEOP)

HSP 1 Score: 98.6 bits (244), Expect = 1.140e-22
Identity = 58/77 (75.32%), Postives = 65/77 (84.42%), Query Frame = 0 
Query:   19 GSRIWDASKGMCLKTLNIDDNNSPVSFVKFSPNGKFILASTLDSTLXXXXXXXXXXXXXYTGHRNEMYCCFATFSVT 95
            G+RIWD + G CLKTL IDD+N PVSFVKFSPNGK+ILA+TLD+TL  XXXXXXXXXX Y GH+NE YC FA FSVT
Sbjct:   89 GNRIWDTASGQCLKTL-IDDDNPPVSFVKFSPNGKYILAATLDNTLKLXXXXXXXXXXTYNGHKNEKYCIFANFSVT 164
[Close]
BLAST of mRNA_M-pyrifera_M_contig112907.2682.1 vs. uniprot
Match: B3SEK3_TRIAD (Uncharacterized protein n=1 Tax=Trichoplax adhaerens TaxID=10228 RepID=B3SEK3_TRIAD)

HSP 1 Score: 96.7 bits (239), Expect = 3.820e-22
Identity = 71/115 (61.74%), Postives = 81/115 (70.43%), Query Frame = 0 
Query:   20 SRIWDASKGMCLKT-------LNIDDNNSPVSFVKFSPNGKFILASTLDSTLXXXXXXXXXXXXXYTGHRNEMYCCFATFSVTNXXXXXXXXXXXXXXXXXXXSKAVVQKLTGHT 127
            +RIWD + G CLKT       L  DD+N PVSFVKFSPNGK+ILA+TLD+TL             Y GH+NE YC FA+FSVT  XXXXXXXXXXXXXXXXXX   VVQKL+GH+
Sbjct:   89 TRIWDTASGQCLKTIIDQHTPLISDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYRGHKNEKYCIFASFSVTGGXXXXXXXXXXXXXXXXXXXXXVVQKLSGHS 203
[Close]
BLAST of mRNA_M-pyrifera_M_contig112907.2682.1 vs. uniprot
Match: A0A367IQ57_RHIST (WD repeat-containing protein 5 (Fragment) n=1 Tax=Rhizopus stolonifer TaxID=4846 RepID=A0A367IQ57_RHIST)

HSP 1 Score: 94.0 bits (232), Expect = 4.710e-22
Identity = 46/75 (61.33%), Postives = 52/75 (69.33%), Query Frame = 0 
Query:   21 RIWDASKGMCLKTLNIDDNNSPVSFVKFSPNGKFILASTLDSTLXXXXXXXXXXXXXYTGHRNEMYCCFATFSVT 95
            RIWD + G CLKTL +DD+N PVSFVKFSPNGK+ILASTLD+TL             Y GH N  YC FA+FSVT
Sbjct:    1 RIWDTASGQCLKTL-VDDDNPPVSFVKFSPNGKYILASTLDNTLRLWNYHTGKCLKTYRGHENSKYCIFASFSVT 74
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig112907.2682.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI0009A35FF38.680e-2875.00WD repeat-containing protein 5-like n=1 Tax=Rhinco... [more]
UPI001C4B3C5D6.250e-2760.75WD repeat-containing protein 5-like n=1 Tax=Plectr... [more]
A0A0B6ZN80_9EUPU1.710e-2675.47Uncharacterized protein (Fragment) n=3 Tax=Protost... [more]
A0A401RL75_CHIPU3.400e-2562.62Uncharacterized protein (Fragment) n=1 Tax=Chilosc... [more]
A0A8J2MLL8_COTCN3.760e-2561.74Similar to wdr5: WD repeat-containing protein 5 (X... [more]
S9YV77_CAMFR8.820e-2377.92WD repeat-containing protein 5 n=1 Tax=Camelus fer... [more]
A0A0L7K5C8_9NEOP1.140e-2276.00Will die slowly (Fragment) n=1 Tax=Operophtera bru... [more]
A0A0L7LPH8_9NEOP1.140e-2275.32Will die slowly n=1 Tax=Operophtera brumata TaxID=... [more]
B3SEK3_TRIAD3.820e-2261.74Uncharacterized protein n=1 Tax=Trichoplax adhaere... [more]
A0A367IQ57_RHIST4.710e-2261.33WD repeat-containing protein 5 (Fragment) n=1 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 27..68
e-value: 4.2E-5
score: 32.9
coord: 71..113
e-value: 3.7E-6
score: 36.5
IPR001680WD40 repeatPFAMPF00400WD40coord: 30..68
e-value: 2.0E-5
score: 25.3
coord: 72..113
e-value: 2.4E-8
score: 34.5
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 36..77
score: 13.65
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 96..122
score: 9.874
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 7..127
e-value: 2.0E-41
score: 143.8
IPR037866WD40-repeat-containing protein Swd3/WDR5PANTHERPTHR22847:SF516WD REPEAT-CONTAINING PROTEIN 5Bcoord: 20..127
NoneNo IPR availablePANTHERPTHR22847WD40 REPEAT PROTEINcoord: 20..127
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..127
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..12
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..19
score: 0.547
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 100..114
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 21..127
score: 22.465
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 21..127

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig112907contigM-pyrifera_M_contig112907:187..567 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig112907.2682.1mRNA_M-pyrifera_M_contig112907.2682.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig112907 187..567 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig112907.2682.1 ID=prot_M-pyrifera_M_contig112907.2682.1|Name=mRNA_M-pyrifera_M_contig112907.2682.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=127bp
LLSLVSCFSLSLSPLLTRGSRIWDASKGMCLKTLNIDDNNSPVSFVKFSP
NGKFILASTLDSTLRLWNHSSGKCLKTYTGHRNEMYCCFATFSVTNGKWI
VSGSEDHCIYIWDLQSKAVVQKLTGHT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR037866Swd3/WDR5
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf