prot_M-pyrifera_M_contig1126.2625.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig1126.2625.1
Unique Name	prot_M-pyrifera_M_contig1126.2625.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	349

Homology

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BLAST of mRNA_M-pyrifera_M_contig1126.2625.1 vs. uniprot
Match: D7G702_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G702_ECTSI)

HSP 1 Score: 125 bits (314), Expect = 2.220e-29
Identity = 132/378 (34.92%), Postives = 158/378 (41.80%), Query Frame = 0

Query:    1 MFDMLALKIGEAQAFADGLVNLDALSMDRLLEEQEREERAKDESLRLLRASGDATDVACFHDADFGQTERSRS----------------ADIELQQL-STDSEQFRSIG---GXXXXXXXXXD--------GANFEDEFDPILASIRKPAHDPGRASPTRVSSVSPTRTGRPASTASASSPRDGFESFLPGERNPPAAGGAFASGLLSMFPENMRARAEGVMAQSSASISKSAGAFRSALESSGGPSAAAVAKGKRXXXXPPHLMDAASRA-EEGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRGMG-VCGWRRRPKYLIVGAAVGVALVGVYCLWLWTGVMLGVE-ADGVAALGAGR 347
            MFDMLA KIGEAQAFADGLVNLD ++MDRLLEEQER        LRL                                           DIE+ QL   D+ + RS     G         D        G NFEDEFDPILASIRKP   P   +    SS+SP   GR         P          +   P  G + A+G LSM P +MRA+A  VMAQSSA IS+SA AFRSAL   G   +A     +R        +D      EEGR                                              G G G  CGWRR  KY+ V   VG+ L+G+  LW WT +++G + A+ V  LG+ R
Sbjct:    1 MFDMLASKIGEAQAFADGLVNLDVINMDRLLEEQERXXXXXXXXLRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDIEIPQLRQEDNAELRSHPSPRGSTSEHSSFGDRFASMEDGGVNFEDEFDPILASIRKPQQPPASTT-AAASSMSPR--GRXXXXXXXXXPSGRERGREANDAGRPTTGSSLAAGFLSMLPGDMRAKAGEVMAQSSARISESANAFRSALGPGGAAQSATDKSKRRQSDHTCRGVDGGDHELEEGRGDEDDVRLMNVNEVLSEEERQQLASFAG------------------GAGAGRFCGWRRLRKYVPV--FVGIGLLGLLYLWRWTTLLVGKDTANEVKVLGSER 355

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig1126.2625.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig1126.2625.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D7G702_ECTSI	2.220e-29	34.92	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 27..47
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 329..348
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..307
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 308..328
None	No IPR available	TMHMM	TMhelix		coord: 308..330

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig1126	contig	M-pyrifera_M_contig1126:5102..11897 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig1126.2625.1	mRNA_M-pyrifera_M_contig1126.2625.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig1126 5102..11897 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig1126.2625.1 ID=prot_M-pyrifera_M_contig1126.2625.1|Name=mRNA_M-pyrifera_M_contig1126.2625.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=349bp
MFDMLALKIGEAQAFADGLVNLDALSMDRLLEEQEREERAKDESLRLLRA
SGDATDVACFHDADFGQTERSRSADIELQQLSTDSEQFRSIGGGGGGGGG
GGDGANFEDEFDPILASIRKPAHDPGRASPTRVSSVSPTRTGRPASTASA
SSPRDGFESFLPGERNPPAAGGAFASGLLSMFPENMRARAEGVMAQSSAS
ISKSAGAFRSALESSGGPSAAAVAKGKRRESDPPHLMDAASRAEEGRGKN
GAGGGGRRMVAGDGNEEDVLMVSVNDLLSDDERQQLASFSGGGGRGMGVC
GWRRRPKYLIVGAAVGVALVGVYCLWLWTGVMLGVEADGVAALGAGRR*