prot_M-pyrifera_M_contig112450.2608.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig112450.2608.1
Unique Nameprot_M-pyrifera_M_contig112450.2608.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length121
Homology
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BLAST of mRNA_M-pyrifera_M_contig112450.2608.1 vs. uniprot
Match: A0A2G5F2P8_AQUCA (ANAPC8 domain-containing protein n=2 Tax=Thalictroideae TaxID=1463137 RepID=A0A2G5F2P8_AQUCA)

HSP 1 Score: 55.1 bits (131), Expect = 2.530e-6
Identity = 35/104 (33.65%), Postives = 56/104 (53.85%), Query Frame = 0 
Query:   18 WLYGVLLREVGDVEGAREVLAASVQADPWHWGAWAELGRCVSSKADVEAVLRKGPSHWMASLWCADALIGLHNGEGALPILKAAVKGPLPSSHWVRSKVATALY 121
            +LYGV+L+E+G  + AR+VL  SV   PW+W AW+EL +C+ +  DV   L    +HWM   +       L      L   +  +KG    S++V++++A   Y
Sbjct:  182 YLYGVVLKEIGREDLARDVLVESVNRYPWNWNAWSEL-QCLCTNVDVLNGLNL-KNHWMRDFFYGLVYQELRMRTDCLAKYEF-LKGIFCFSNYVQAQIAKVKY 282
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BLAST of mRNA_M-pyrifera_M_contig112450.2608.1 vs. uniprot
Match: L8GY64_ACACA (Tetratricopeptide repeat domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GY64_ACACA)

HSP 1 Score: 54.7 bits (130), Expect = 3.480e-6
Identity = 29/75 (38.67%), Postives = 43/75 (57.33%), Query Frame = 0 
Query:   12 LDGCVGWLYGVLLREVGDVEGAREVLAASVQADPWHWGAWAELGRCVSSKADVEAVLRKGPSHWMASLWCADALI 86
            LDG   ++Y ++LRE G ++ AR++LA SV+A PW+W AW +L    S   +  A L   P H M   + A A +
Sbjct:  213 LDGFCSYIYAIVLREEGQLDKARDMLAESVRAYPWNWSAWLDLAALPSLSWEHIASLNL-PHHIMRDFFYAQACL 286
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig112450.2608.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2G5F2P8_AQUCA2.530e-633.65ANAPC8 domain-containing protein n=2 Tax=Thalictro... [more]
L8GY64_ACACA3.480e-638.67Tetratricopeptide repeat domain containing protein... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13428TPR_14coord: 20..57
e-value: 4.1E-5
score: 24.0
NoneNo IPR availablePANTHERPTHR12558CELL DIVISION CYCLE 16,23,27coord: 8..121
NoneNo IPR availablePANTHERPTHR12558:SF10CELL DIVISION CYCLE PROTEIN 23 HOMOLOGcoord: 8..121
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 3..121
e-value: 3.7E-21
score: 77.7
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 18..102

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig112450contigM-pyrifera_M_contig112450:220..582 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig112450.2608.1mRNA_M-pyrifera_M_contig112450.2608.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig112450 217..582 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig112450.2608.1 ID=prot_M-pyrifera_M_contig112450.2608.1|Name=mRNA_M-pyrifera_M_contig112450.2608.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=121bp
MGASASRSRSVLDGCVGWLYGVLLREVGDVEGAREVLAASVQADPWHWGA
WAELGRCVSSKADVEAVLRKGPSHWMASLWCADALIGLHNGEGALPILKA
AVKGPLPSSHWVRSKVATALY
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf